RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT3YDR394W UBP11P36026 717 aa6.48□□□□□ -1.37
RPT3YDR394W YKR018CP36114 725 aa6.48□□□□□ -1.37
RPT3YDR394W MIC19P43594 170 aa6.48□□□□□ -1.37
RPT3YDR394W KAP114P53067 1004 aa6.48□□□□□ -1.37
RPT3YDR394W ZPR1P53303 486 aaKnown RBP6.48□□□□□ -1.37
RPT3YDR394W SQS1P53866 767 aaKnown RBP6.48□□□□□ -1.37
RPT3YDR394W NCS2P53923 493 aaPredicted RBP6.48□□□□□ -1.37
RPT3YDR394W MRS2Q01926 470 aa6.48□□□□□ -1.37
RPT3YDR394W YMR114CQ04471 368 aaKnown RBP6.48□□□□□ -1.37
RPT3YDR394W TMA64Q04600 565 aaKnown RBP6.48□□□□□ -1.37
RPT3YDR394W DON1Q05610 365 aa6.48□□□□□ -1.37
RPT3YDR394W SIL1Q08199 421 aa6.48□□□□□ -1.37
RPT3YDR394W RIO1Q12196 484 aaKnown RBP6.48□□□□□ -1.37
RPT3YDR394W LSO1Q3E827 93 aa6.48□□□□□ -1.37
RPT3YDR394W NHA1Q99271 985 aa6.48□□□□□ -1.37
RPT3YDR394W YLR278CQ05854 1341 aa6.48□□□□□ -1.37
RPT3YDR394W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
RPT3YDR394W SNF1P06782 633 aaKnown RBP6.47□□□□□ -1.37
RPT3YDR394W GFA1P14742 717 aaKnown RBP6.47□□□□□ -1.37
RPT3YDR394W SEC21P32074 935 aaKnown RBP6.47□□□□□ -1.37
RPT3YDR394W VPS35P34110 944 aa6.47□□□□□ -1.37
RPT3YDR394W YEL1P34225 687 aa6.47□□□□□ -1.37
RPT3YDR394W BLI1P35727 113 aa6.47□□□□□ -1.37
RPT3YDR394W OCT1P35999 772 aa6.47□□□□□ -1.37
RPT3YDR394W OLA1P38219 394 aaKnown RBP6.47□□□□□ -1.37
RPT3YDR394W RCK2P38623 610 aa6.47□□□□□ -1.37
RPT3YDR394W VPS41P38959 992 aa6.47□□□□□ -1.37
RPT3YDR394W ULP2P40537 1034 aaPredicted RBP6.47□□□□□ -1.37
RPT3YDR394W LCB2P40970 561 aa6.47□□□□□ -1.37
RPT3YDR394W CTK3P46963 296 aaPredicted RBP6.47□□□□□ -1.37
RPT3YDR394W HUL5P53119 910 aa6.47□□□□□ -1.37
RPT3YDR394W ARK1P53974 638 aa6.47□□□□□ -1.37
RPT3YDR394W TIM8P57744 87 aa6.47□□□□□ -1.37
RPT3YDR394W EEB1Q02891 456 aa6.47□□□□□ -1.37
RPT3YDR394W OMS1Q06668 471 aa6.47□□□□□ -1.37
RPT3YDR394W CRD1Q07560 283 aa6.47□□□□□ -1.37
RPT3YDR394W ISA1Q07821 250 aaPredicted RBP6.47□□□□□ -1.37
RPT3YDR394W RUD3Q12234 484 aaKnown RBP6.47□□□□□ -1.37
RPT3YDR394W ZRT2Q12436 422 aa6.47□□□□□ -1.37
RPT3YDR394W TRP2P00899 507 aaKnown RBP6.46□□□□□ -1.38
RPT3YDR394W ERG11P10614 530 aa6.46□□□□□ -1.38
RPT3YDR394W CHS2P14180 963 aa6.46□□□□□ -1.38
RPT3YDR394W DBP5P20449 482 aaKnown RBP6.46□□□□□ -1.38
RPT3YDR394W KIP1P28742 1111 aa6.46□□□□□ -1.38
RPT3YDR394W UBC6P33296 250 aaPredicted RBP6.46□□□□□ -1.38
RPT3YDR394W MCR1P36060 302 aaKnown RBP6.46□□□□□ -1.38
RPT3YDR394W YKL023WP36103 277 aaKnown RBP6.46□□□□□ -1.38
RPT3YDR394W VAB2P40003 282 aa6.46□□□□□ -1.38
RPT3YDR394W PSY2P40164 858 aa6.46□□□□□ -1.38
RPT3YDR394W YIL165CP40446 119 aa6.46□□□□□ -1.38
RPT3YDR394W PXA1P41909 870 aa6.46□□□□□ -1.38
RPT3YDR394W RPC17P47076 161 aa6.46□□□□□ -1.38
RPT3YDR394W SUT1P53032 299 aaKnown RBP6.46□□□□□ -1.38
RPT3YDR394W GYL1Q04322 720 aa6.46□□□□□ -1.38
RPT3YDR394W YMR018WQ04364 514 aa6.46□□□□□ -1.38
RPT3YDR394W APL5Q08951 932 aaKnown RBP6.46□□□□□ -1.38
RPT3YDR394W SAM1P10659 382 aaKnown RBP6.45□□□□□ -1.38
RPT3YDR394W DEP1P31385 405 aa6.45□□□□□ -1.38
RPT3YDR394W ATG19P35193 415 aa6.45□□□□□ -1.38
RPT3YDR394W SPC72P39723 622 aa6.45□□□□□ -1.38
RPT3YDR394W HMF1P40037 129 aaKnown RBP6.45□□□□□ -1.38
RPT3YDR394W PRY1P47032 299 aa6.45□□□□□ -1.38
RPT3YDR394W YAF9P53930 226 aa6.45□□□□□ -1.38
RPT3YDR394W URH1Q04179 340 aa6.45□□□□□ -1.38
RPT3YDR394W UTP14Q04500 899 aaKnown RBP6.45□□□□□ -1.38
RPT3YDR394W ECI1Q05871 280 aa6.45□□□□□ -1.38
RPT3YDR394W UBX5Q06682 500 aa6.45□□□□□ -1.38
RPT3YDR394W RKM4Q12504 494 aa6.45□□□□□ -1.38
RPT3YDR394W FUR4P05316 633 aaKnown RBP6.44□□□□□ -1.38
RPT3YDR394W FBP1P09201 348 aa6.44□□□□□ -1.38
RPT3YDR394W COT1P32798 439 aa6.44□□□□□ -1.38
RPT3YDR394W LAS1P36146 502 aaPredicted RBP6.44□□□□□ -1.38
RPT3YDR394W GPB2P39717 880 aa6.44□□□□□ -1.38
RPT3YDR394W RAD26P40352 1085 aa6.44□□□□□ -1.38
RPT3YDR394W RGD2P43556 714 aa6.44□□□□□ -1.38
RPT3YDR394W YJR039WP47107 1121 aa6.44□□□□□ -1.38
RPT3YDR394W PPT1P53043 513 aa6.44□□□□□ -1.38
RPT3YDR394W JJJ1P53863 590 aa6.44□□□□□ -1.38
RPT3YDR394W RPL34AP87262 121 aaPredicted RBP6.44□□□□□ -1.38
RPT3YDR394W STE23Q06010 1027 aa6.44□□□□□ -1.38
RPT3YDR394W DUS3Q06053 668 aaKnown RBP6.44□□□□□ -1.38
RPT3YDR394W EMG1Q06287 252 aaKnown RBP6.44□□□□□ -1.38
RPT3YDR394W SMC5Q08204 1093 aa6.44□□□□□ -1.38
RPT3YDR394W CDC53Q12018 815 aaKnown RBP6.44□□□□□ -1.38
RPT3YDR394W GSC2P40989 1895 aa6.44□□□□□ -1.38
RPT3YDR394W THS1P04801 734 aaKnown RBP6.43□□□□□ -1.38
RPT3YDR394W RAD1P06777 1100 aa6.43□□□□□ -1.38
RPT3YDR394W MUD1P32605 298 aaKnown RBP6.43□□□□□ -1.38
RPT3YDR394W UTR4P32626 227 aa6.43□□□□□ -1.38
RPT3YDR394W ECM32P32644 1121 aaKnown RBP6.43□□□□□ -1.38
RPT3YDR394W YKL050CP35736 922 aa6.43□□□□□ -1.38
RPT3YDR394W SPP381P38282 291 aaPredicted RBP6.43□□□□□ -1.38
RPT3YDR394W RGD1P38339 666 aa6.43□□□□□ -1.38
RPT3YDR394W SAK1P38990 1142 aa6.43□□□□□ -1.38
RPT3YDR394W PEA2P40091 420 aa6.43□□□□□ -1.38
RPT3YDR394W YJR079WP47126 109 aa6.43□□□□□ -1.38
RPT3YDR394W TAM41P53230 385 aa6.43□□□□□ -1.38
RPT3YDR394W YGR125WP53273 1036 aa6.43□□□□□ -1.38
RPT3YDR394W RPL22BP56628 122 aaKnown RBP6.43□□□□□ -1.38
RPT3YDR394W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.43□□□□□ -1.38not detected
Retrieved 100 of 5,963 RNA–protein pairs in 103.3 ms