RNA–Protein interactions for RNA: YDR228C

PCF11, Transcript of mRNA 3' end processing factor, yeastyeast

Gene PCF11, Length 1,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCF11YDR228C HSL7P38274 827 aa2.92□□□□□ -1.94
PCF11YDR228C YEL020CP39994 560 aa2.92□□□□□ -1.94
PCF11YDR228C NUP82P40368 713 aa2.92□□□□□ -1.94
PCF11YDR228C NOP9P47077 666 aaKnown RBP2.92□□□□□ -1.94
PCF11YDR228C CTR1P49573 406 aa2.92□□□□□ -1.94
PCF11YDR228C PCL10P53124 433 aa2.92□□□□□ -1.94
PCF11YDR228C RPN13O13563 156 aa2.91□□□□□ -1.94
PCF11YDR228C THR1P17423 357 aaKnown RBP2.91□□□□□ -1.94
PCF11YDR228C PEX2P32800 271 aa2.91□□□□□ -1.94
PCF11YDR228C APM1Q00776 475 aaPredicted RBP2.91□□□□□ -1.94
PCF11YDR228C LEE1Q02799 301 aaKnown RBP2.91□□□□□ -1.94
PCF11YDR228C UGO1Q03327 502 aa2.91□□□□□ -1.94
PCF11YDR228C COG8Q04632 607 aa2.91□□□□□ -1.94
PCF11YDR228C RPN7Q06103 429 aaKnown RBP2.91□□□□□ -1.94
PCF11YDR228C YLR125WQ12138 136 aa2.91□□□□□ -1.94
PCF11YDR228C GSY1P23337 708 aa2.9□□□□□ -1.94
PCF11YDR228C YKL091CP33324 310 aaKnown RBP2.9□□□□□ -1.94
PCF11YDR228C YEL1P34225 687 aa2.9□□□□□ -1.94
PCF11YDR228C CRP1P38845 465 aaKnown RBP2.9□□□□□ -1.94
PCF11YDR228C PAC2P39937 518 aa2.9□□□□□ -1.94
PCF11YDR228C THI22Q06490 572 aa2.9□□□□□ -1.94
PCF11YDR228C CLF1Q12309 687 aaPredicted RBP2.9□□□□□ -1.94
PCF11YDR228C ZRT2Q12436 422 aa2.9□□□□□ -1.94
PCF11YDR228C PCL2P25693 308 aa2.9□□□□□ -1.95
PCF11YDR228C YPT7P32939 208 aa2.9□□□□□ -1.95
PCF11YDR228C BRE5P53741 515 aaKnown RBP2.9□□□□□ -1.95
PCF11YDR228C PHO8P11491 566 aa2.89□□□□□ -1.95
PCF11YDR228C SET3P36124 751 aa2.89□□□□□ -1.95
PCF11YDR228C SSZ1P38788 538 aaKnown RBP2.89□□□□□ -1.95
PCF11YDR228C SNM1P40993 198 aa2.89□□□□□ -1.95
PCF11YDR228C FUB1P25659 250 aa2.88□□□□□ -1.95
PCF11YDR228C CCR4P31384 837 aaKnown RBP2.88□□□□□ -1.95
PCF11YDR228C BCS1P32839 456 aa2.88□□□□□ -1.95
PCF11YDR228C PEX6P33760 1030 aa2.88□□□□□ -1.95
PCF11YDR228C MNN4P36044 1178 aa2.88□□□□□ -1.95
PCF11YDR228C BIT2P38346 545 aa2.88□□□□□ -1.95
PCF11YDR228C DSS1P39112 969 aa2.88□□□□□ -1.95
PCF11YDR228C RSC8P43609 557 aaKnown RBP2.88□□□□□ -1.95
PCF11YDR228C SET2P46995 733 aaKnown RBP2.88□□□□□ -1.95
PCF11YDR228C UBC9P50623 157 aaPredicted RBP2.88□□□□□ -1.95
PCF11YDR228C MRK1P50873 501 aa2.88□□□□□ -1.95
PCF11YDR228C ATG33Q06485 197 aa2.88□□□□□ -1.95
PCF11YDR228C CIT2P08679 460 aa2.88□□□□□ -1.95
PCF11YDR228C RAD18P10862 487 aa2.88□□□□□ -1.95
PCF11YDR228C SPO11P23179 398 aa2.88□□□□□ -1.95
PCF11YDR228C PRP28P23394 588 aa2.88□□□□□ -1.95
PCF11YDR228C AKL1P38080 1108 aaKnown RBP2.88□□□□□ -1.95
PCF11YDR228C PCM1P38628 557 aaKnown RBP2.88□□□□□ -1.95
PCF11YDR228C YJR039WP47107 1121 aa2.88□□□□□ -1.95
PCF11YDR228C USV1Q12132 391 aa2.88□□□□□ -1.95
PCF11YDR228C HMG1P12683 1054 aa2.87□□□□□ -1.95
PCF11YDR228C GMH1P36125 273 aa2.87□□□□□ -1.95
PCF11YDR228C YNL195CP40168 261 aa2.87□□□□□ -1.95
PCF11YDR228C HOF1Q05080 669 aa2.87□□□□□ -1.95
PCF11YDR228C THI7Q05998 598 aa2.87□□□□□ -1.95
PCF11YDR228C DCS2Q12123 353 aa2.87□□□□□ -1.95
PCF11YDR228C MDM10P18409 493 aa2.86□□□□□ -1.95
PCF11YDR228C MSS1P32559 526 aaPredicted RBP2.86□□□□□ -1.95
PCF11YDR228C APN2P38207 520 aa2.86□□□□□ -1.95
PCF11YDR228C YGR151CP53287 111 aa2.86□□□□□ -1.95
PCF11YDR228C MRI1Q06489 411 aaKnown RBP2.86□□□□□ -1.95
PCF11YDR228C YLR001CQ07895 862 aa2.86□□□□□ -1.95
PCF11YDR228C DIA2Q08496 732 aaPredicted RBP2.86□□□□□ -1.95
PCF11YDR228C BMS1Q08965 1183 aaKnown RBP2.86□□□□□ -1.95
PCF11YDR228C ECM3Q99252 613 aa2.86□□□□□ -1.95
PCF11YDR228C MUP3P38734 546 aa2.86□□□□□ -1.95
PCF11YDR228C AIM14P53109 570 aa2.86□□□□□ -1.95
PCF11YDR228C GIN4Q12263 1142 aa2.86□□□□□ -1.95
PCF11YDR228C SFL1P20134 766 aa2.85□□□□□ -1.95
PCF11YDR228C VPS34P22543 875 aa2.85□□□□□ -1.95
PCF11YDR228C THI4P32318 326 aa2.85□□□□□ -1.95
PCF11YDR228C YMC2P38087 329 aa2.85□□□□□ -1.95
PCF11YDR228C BEM4P39011 633 aa2.85□□□□□ -1.95
PCF11YDR228C MIT1P40002 666 aa2.85□□□□□ -1.95
PCF11YDR228C PIG2P40187 538 aa2.85□□□□□ -1.95
PCF11YDR228C NTG2Q08214 380 aa2.85□□□□□ -1.95
PCF11YDR228C CHS5Q12114 671 aaKnown RBP2.85□□□□□ -1.95
PCF11YDR228C ABF1P14164 731 aa2.84□□□□□ -1.95
PCF11YDR228C FEN2P25621 512 aaKnown RBP2.84□□□□□ -1.95
PCF11YDR228C CTP1P38152 299 aa2.84□□□□□ -1.95
PCF11YDR228C YHR097CP38809 366 aaKnown RBP2.84□□□□□ -1.95
PCF11YDR228C NUG1P40010 520 aaKnown RBP2.84□□□□□ -1.95
PCF11YDR228C KHA1P40309 873 aa2.84□□□□□ -1.95
PCF11YDR228C OSW1Q08692 278 aa2.84□□□□□ -1.95
PCF11YDR228C POM34Q12445 299 aa2.84□□□□□ -1.95
PCF11YDR228C KCC4P25389 1037 aa2.84□□□□□ -1.96
PCF11YDR228C BIT61P47041 543 aa2.84□□□□□ -1.96
PCF11YDR228C MPS3P47069 682 aa2.84□□□□□ -1.96
PCF11YDR228C COX18P53239 316 aa2.84□□□□□ -1.96
PCF11YDR228C YDL086WQ07505 273 aa2.84□□□□□ -1.96
PCF11YDR228C PHO5P00635 467 aa2.83□□□□□ -1.96
PCF11YDR228C KSP1P38691 1029 aaKnown RBP2.83□□□□□ -1.96
PCF11YDR228C YHR202WP38887 602 aa2.83□□□□□ -1.96
PCF11YDR228C DOT6P40059 670 aaKnown RBP2.83□□□□□ -1.96
PCF11YDR228C RFX1P48743 811 aa2.83□□□□□ -1.96
PCF11YDR228C POB3Q04636 552 aaKnown RBP2.83□□□□□ -1.96
PCF11YDR228C VPS36Q06696 566 aa2.83□□□□□ -1.96
PCF11YDR228C ISA1Q07821 250 aaPredicted RBP2.83□□□□□ -1.96
PCF11YDR228C PET127P32606 800 aa2.82□□□□□ -1.96
PCF11YDR228C ORC2P32833 620 aa2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 173.3 ms