RNA–Protein interactions for RNA: YDL190C

UFD2, Transcript of Ubiquitin chain assembly factor (E4), yeastyeast

Gene UFD2, Length 2,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD2YDL190C RPN10P38886 268 aaKnown RBP1.84□□□□□ -2.12
UFD2YDL190C OAF1P39720 1047 aaPredicted RBP1.84□□□□□ -2.12
UFD2YDL190C EXG2P52911 562 aa1.84□□□□□ -2.12
UFD2YDL190C RAI1P53063 387 aaKnown RBP1.84□□□□□ -2.12
UFD2YDL190C NOG2P53742 486 aaKnown RBP1.84□□□□□ -2.12
UFD2YDL190C YTM1Q12024 460 aaPredicted RBP1.84□□□□□ -2.12
UFD2YDL190C NYV1Q12255 253 aa1.84□□□□□ -2.12
UFD2YDL190C NOT3P06102 836 aaKnown RBP1.83□□□□□ -2.12
UFD2YDL190C YCL002CP25565 263 aa1.83□□□□□ -2.12
UFD2YDL190C HIR1P32479 840 aa1.83□□□□□ -2.12
UFD2YDL190C SUL1P38359 859 aa1.83□□□□□ -2.12
UFD2YDL190C DOT6P40059 670 aaKnown RBP1.83□□□□□ -2.12
UFD2YDL190C GZF3P42944 551 aaKnown RBP1.83□□□□□ -2.12
UFD2YDL190C HXT16P47185 567 aa1.83□□□□□ -2.12
UFD2YDL190C YNL034WP53963 612 aa1.83□□□□□ -2.12
UFD2YDL190C YNL018CP53976 612 aa1.83□□□□□ -2.12
UFD2YDL190C LRS4Q04087 347 aaKnown RBP1.83□□□□□ -2.12
UFD2YDL190C NHX1Q04121 633 aa1.83□□□□□ -2.12
UFD2YDL190C MPD2Q99316 277 aa1.83□□□□□ -2.12
UFD2YDL190C TAD3Q9URQ3 322 aa1.83□□□□□ -2.12
UFD2YDL190C ATP4P05626 244 aa1.83□□□□□ -2.12
UFD2YDL190C AEP2P22136 580 aa1.83□□□□□ -2.12
UFD2YDL190C MIH1P23748 554 aa1.83□□□□□ -2.12
UFD2YDL190C KAR4P25583 335 aa1.83□□□□□ -2.12
UFD2YDL190C URA1P28272 314 aaPredicted RBP1.83□□□□□ -2.12
UFD2YDL190C RPC82P32349 654 aa1.83□□□□□ -2.12
UFD2YDL190C PEA2P40091 420 aa1.83□□□□□ -2.12
UFD2YDL190C DUG1P43616 481 aaKnown RBP1.83□□□□□ -2.12
UFD2YDL190C JSN1P47135 1091 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
UFD2YDL190C YGR153WP48238 217 aa1.83□□□□□ -2.12
UFD2YDL190C NCS6P53088 359 aa1.83□□□□□ -2.12
UFD2YDL190C TGL2P54857 326 aa1.83□□□□□ -2.12
UFD2YDL190C YMR206WQ03695 313 aa1.83□□□□□ -2.12
UFD2YDL190C GIS1Q03833 894 aa1.83□□□□□ -2.12
UFD2YDL190C YDR338CQ05497 695 aa1.83□□□□□ -2.12
UFD2YDL190C BUD21Q08492 214 aaPredicted RBP1.83□□□□□ -2.12
UFD2YDL190C RPS9AO13516 197 aaKnown RBP1.82□□□□□ -2.12
UFD2YDL190C DIF1O13577 133 aa1.82□□□□□ -2.12
UFD2YDL190C SST2P11972 698 aaKnown RBP1.82□□□□□ -2.12
UFD2YDL190C YEF3P16521 1044 aaKnown RBP1.82□□□□□ -2.12
UFD2YDL190C PWP2P25635 923 aaKnown RBP1.82□□□□□ -2.12
UFD2YDL190C EFT1P32324 842 aaKnown RBP1.82□□□□□ -2.12
UFD2YDL190C SAP190P36123 1033 aa1.82□□□□□ -2.12
UFD2YDL190C HSL7P38274 827 aa1.82□□□□□ -2.12
UFD2YDL190C CHS7P38843 316 aa1.82□□□□□ -2.12
UFD2YDL190C RLP7P40693 322 aaKnown RBP1.82□□□□□ -2.12
UFD2YDL190C CEP3P40969 608 aa1.82□□□□□ -2.12
UFD2YDL190C SHR5P41912 237 aa1.82□□□□□ -2.12
UFD2YDL190C MNN11P46985 422 aaKnown RBP1.82□□□□□ -2.12
UFD2YDL190C NIT2P47016 307 aa1.82□□□□□ -2.12
UFD2YDL190C UBC9P50623 157 aaPredicted RBP1.82□□□□□ -2.12
UFD2YDL190C HDA1P53973 706 aa1.82□□□□□ -2.12
UFD2YDL190C KAR1P11927 433 aa1.82□□□□□ -2.12
UFD2YDL190C CYS3P31373 394 aaKnown RBP1.82□□□□□ -2.12
UFD2YDL190C CCR4P31384 837 aaKnown RBP1.82□□□□□ -2.12
UFD2YDL190C DAL3P32459 195 aa1.82□□□□□ -2.12
UFD2YDL190C VPS24P36095 224 aaKnown RBP1.82□□□□□ -2.12
UFD2YDL190C FUI1P38196 639 aa1.82□□□□□ -2.12
UFD2YDL190C TDA3P38758 523 aa1.82□□□□□ -2.12
UFD2YDL190C GPP2P40106 250 aaKnown RBP1.82□□□□□ -2.12
UFD2YDL190C URM1P40554 99 aaPredicted RBP1.82□□□□□ -2.12
UFD2YDL190C VMS1Q04311 632 aaKnown RBP1.82□□□□□ -2.12
UFD2YDL190C CRR1Q05790 422 aa1.82□□□□□ -2.12
UFD2YDL190C ENB1Q08299 606 aa1.82□□□□□ -2.12
UFD2YDL190C UPC2Q12151 913 aa1.82□□□□□ -2.12
UFD2YDL190C RMP1Q12530 201 aa1.82□□□□□ -2.12
UFD2YDL190C YBR182C-AQ8TGU6 64 aa1.82□□□□□ -2.12
UFD2YDL190C IQG1Q12280 1495 aa1.82□□□□□ -2.12
UFD2YDL190C NUP188P52593 1655 aaKnown RBP1.82□□□□□ -2.12
UFD2YDL190C STE13P33894 931 aa1.81□□□□□ -2.12
UFD2YDL190C DID4P36108 232 aa1.81□□□□□ -2.12
UFD2YDL190C SET5P38890 526 aaKnown RBP1.81□□□□□ -2.12
UFD2YDL190C CCT5P40413 562 aaKnown RBP1.81□□□□□ -2.12
UFD2YDL190C YIL108WP40483 696 aaKnown RBP1.81□□□□□ -2.12
UFD2YDL190C RET2P43621 546 aa1.81□□□□□ -2.12
UFD2YDL190C ECM9Q02202 377 aa1.81□□□□□ -2.12
UFD2YDL190C YKR011CQ02209 353 aa1.81□□□□□ -2.12
UFD2YDL190C VPS72Q03388 795 aa1.81□□□□□ -2.12
UFD2YDL190C SSL1Q04673 461 aaPredicted RBP1.81□□□□□ -2.12
UFD2YDL190C YOL073CQ08232 322 aa1.81□□□□□ -2.12
UFD2YDL190C SPP41P38904 1435 aa1.81□□□□□ -2.12
UFD2YDL190C SMC4Q12267 1418 aa1.81□□□□□ -2.12
UFD2YDL190C PRC1P00729 532 aa1.81□□□□□ -2.12
UFD2YDL190C PIF1P07271 859 aa1.81□□□□□ -2.12
UFD2YDL190C ERG4P25340 473 aa1.81□□□□□ -2.12
UFD2YDL190C YBT1P32386 1661 aa1.81□□□□□ -2.12
UFD2YDL190C RPD3P32561 433 aa1.81□□□□□ -2.12
UFD2YDL190C TYE7P33122 291 aaPredicted RBP1.81□□□□□ -2.12
UFD2YDL190C OAR1P35731 278 aa1.81□□□□□ -2.12
UFD2YDL190C YKR051WP36142 418 aa1.81□□□□□ -2.12
UFD2YDL190C YFL052WP43551 465 aa1.81□□□□□ -2.12
UFD2YDL190C NPY1P53164 384 aa1.81□□□□□ -2.12
UFD2YDL190C PUS2P53167 370 aa1.81□□□□□ -2.12
UFD2YDL190C MET14Q02196 202 aa1.81□□□□□ -2.12
UFD2YDL190C ECM16Q04217 1267 aaKnown RBP1.81□□□□□ -2.12
UFD2YDL190C YOR022CQ12204 715 aa1.81□□□□□ -2.12
UFD2YDL190C LAS17Q12446 633 aa1.81□□□□□ -2.12
UFD2YDL190C TRX2P22803 104 aaKnown RBP1.8□□□□□ -2.12
UFD2YDL190C MOH1P38191 138 aa1.8□□□□□ -2.12
UFD2YDL190C PIP2P52960 996 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms