RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
VMA1	YDL185W	RRT12	P25381	491 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	PRP40	P33203	583 aa	Known RBP	4.19	□□□□□ -1.74
VMA1	YDL185W	PET10	P36139	283 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	PDX3	P38075	228 aa	Known RBP	4.19	□□□□□ -1.74
VMA1	YDL185W	YBR242W	P38331	238 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	GLO3	P38682	493 aa	Known RBP	4.19	□□□□□ -1.74
VMA1	YDL185W	YHL049C	P38722	271 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	YEL075C	P39972	122 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	AVT6	P40074	448 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	YER189W	P40104	122 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	DIM1	P41819	318 aa	Known RBP	4.19	□□□□□ -1.74
VMA1	YDL185W	YFL064C	P43540	174 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	YGL138C	P53122	345 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	MRM2	P53123	320 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	RTC4	P53850	401 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	ASI2	P53895	289 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	SHR3	Q02774	210 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	MMT1	Q03218	510 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	MCM21	Q06675	368 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	CEX1	Q12453	761 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	YBL111C	Q3E7Y5	667 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	YBL113C	Q7M4S9	792 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	CMD1	P06787	147 aa	Known RBP	4.19	□□□□□ -1.74
VMA1	YDL185W	ISY1	P21374	235 aa	Predicted RBP	4.19	□□□□□ -1.74
VMA1	YDL185W	SSA4	P22202	642 aa	Known RBP	4.19	□□□□□ -1.74
VMA1	YDL185W	KIP2	P28743	706 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	EUG1	P32474	517 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	MAL31	P38156	614 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	TIF5	P38431	405 aa	Known RBP	4.19	□□□□□ -1.74
VMA1	YDL185W	YHL008C	P38750	627 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	STT3	P39007	718 aa	Known RBP	4.19	□□□□□ -1.74
VMA1	YDL185W	YHB1	P39676	399 aa	Known RBP	4.19	□□□□□ -1.74
VMA1	YDL185W	FCY21	P40039	528 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	CSM2	P40465	213 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	RAD30	Q04049	632 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	ERB1	Q04660	807 aa	Known RBP	4.19	□□□□□ -1.74
VMA1	YDL185W	YPR078C	Q06813	372 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	SGO1	Q08490	590 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	SNU66	Q12420	587 aa	Predicted RBP	4.19	□□□□□ -1.74
VMA1	YDL185W	FOB1	O13329	566 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	EXO70	P19658	623 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	MSH2	P25847	964 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	CAP1	P28495	268 aa	Known RBP	4.19	□□□□□ -1.74
VMA1	YDL185W	MCM5	P29496	775 aa	Known RBP	4.19	□□□□□ -1.74
VMA1	YDL185W	SEC21	P32074	935 aa	Known RBP	4.19	□□□□□ -1.74
VMA1	YDL185W	AFG2	P32794	780 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	SET3	P36124	751 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	TSC10	P38342	320 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	YHR112C	P38716	378 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	TRM5	P38793	499 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	PIK1	P39104	1066 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	MAM33	P40513	266 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	JJJ2	P46997	583 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	YJR054W	P47114	497 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	RAT1	Q02792	1006 aa	Known RBP	4.19	□□□□□ -1.74
VMA1	YDL185W	MTG1	Q03151	367 aa	Predicted RBP	4.19	□□□□□ -1.74
VMA1	YDL185W	DML1	Q03652	475 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	FIN1	Q03898	291 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	RIX7	Q07844	837 aa	Known RBP	4.19	□□□□□ -1.74
VMA1	YDL185W	YOR238W	Q08634	303 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	NTO1	Q12311	748 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	STE6	P12866	1290 aa		4.18	□□□□□ -1.74
VMA1	YDL185W	ATR1	P13090	542 aa		4.18	□□□□□ -1.74
VMA1	YDL185W	RNR3	P21672	869 aa	Known RBP	4.18	□□□□□ -1.74
VMA1	YDL185W	NPP1	P25353	742 aa		4.18	□□□□□ -1.74
VMA1	YDL185W	HSP30	P25619	332 aa		4.18	□□□□□ -1.74
VMA1	YDL185W	NUP120	P35729	1037 aa		4.18	□□□□□ -1.74
VMA1	YDL185W	MYO3	P36006	1272 aa		4.18	□□□□□ -1.74
VMA1	YDL185W	YLF2	P38746	405 aa		4.18	□□□□□ -1.74
VMA1	YDL185W	END3	P39013	349 aa		4.18	□□□□□ -1.74
VMA1	YDL185W	SPC72	P39723	622 aa		4.18	□□□□□ -1.74
VMA1	YDL185W	BNI4	P53858	892 aa		4.18	□□□□□ -1.74
VMA1	YDL185W	RPL22B	P56628	122 aa	Known RBP	4.18	□□□□□ -1.74
VMA1	YDL185W	RPS15	Q01855	142 aa	Known RBP	4.18	□□□□□ -1.74
VMA1	YDL185W	YMR111C	Q04461	462 aa	Predicted RBP	4.18	□□□□□ -1.74
VMA1	YDL185W	MCP2	Q06567	569 aa		4.18	□□□□□ -1.74
VMA1	YDL185W	ADY3	Q07732	790 aa		4.18	□□□□□ -1.74
VMA1	YDL185W	SNX3	Q08826	162 aa	Known RBP	4.18	□□□□□ -1.74
VMA1	YDL185W	GRE2	Q12068	342 aa	Known RBP	4.18	□□□□□ -1.74
VMA1	YDL185W	YLR125W	Q12138	136 aa		4.18	□□□□□ -1.74
VMA1	YDL185W	NCR1	Q12200	1170 aa		4.18	□□□□□ -1.74
VMA1	YDL185W	SLX5	P32828	619 aa	Known RBP	4.18	□□□□□ -1.74
VMA1	YDL185W	SIP2	P34164	415 aa	Known RBP	4.18	□□□□□ -1.74
VMA1	YDL185W	PGM2	P37012	569 aa	Known RBP	4.18	□□□□□ -1.74
VMA1	YDL185W	VHC1	P38329	1120 aa		4.18	□□□□□ -1.74
VMA1	YDL185W	SSZ1	P38788	538 aa	Known RBP	4.18	□□□□□ -1.74
VMA1	YDL185W	IRC8	P47046	822 aa		4.18	□□□□□ -1.74
VMA1	YDL185W	ATH1	P48016	1211 aa		4.18	□□□□□ -1.74
VMA1	YDL185W	SLU7	Q02775	382 aa	Known RBP	4.18	□□□□□ -1.74
VMA1	YDL185W	SYH1	Q02875	849 aa	Known RBP	4.18	□□□□□ -1.74
VMA1	YDL185W	YDR239C	Q03780	787 aa		4.18	□□□□□ -1.74
VMA1	YDL185W	ARP9	Q05123	467 aa		4.18	□□□□□ -1.74
VMA1	YDL185W	ADY4	Q05955	493 aa		4.18	□□□□□ -1.74
VMA1	YDL185W	YDL114W	Q07530	308 aa		4.18	□□□□□ -1.74
VMA1	YDL185W	OXR1	Q08952	273 aa		4.18	□□□□□ -1.74
VMA1	YDL185W	VCX1	Q99385	411 aa		4.18	□□□□□ -1.74
VMA1	YDL185W	MYO1	P08964	1928 aa		4.18	□□□□□ -1.74
VMA1	YDL185W	TUF1	P02992	437 aa	Known RBP	4.17	□□□□□ -1.74
VMA1	YDL185W	THS1	P04801	734 aa	Known RBP	4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms