RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W PFK2P16862 959 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
USO1YDL058W AFG1P32317 509 aa2.13□□□□□ -2.07
USO1YDL058W PAH1P32567 862 aa2.13□□□□□ -2.07
USO1YDL058W STE5P32917 917 aa2.13□□□□□ -2.07
USO1YDL058W TEF4P36008 412 aaKnown RBP2.13□□□□□ -2.07
USO1YDL058W CDC27P38042 758 aa2.13□□□□□ -2.07
USO1YDL058W RDH54P38086 958 aa2.13□□□□□ -2.07
USO1YDL058W SRP68P38687 599 aaKnown RBP2.13□□□□□ -2.07
USO1YDL058W YER156CP40093 338 aaKnown RBP2.13□□□□□ -2.07
USO1YDL058W CAF16P43569 289 aa2.13□□□□□ -2.07
USO1YDL058W AAD10P47182 288 aa2.13□□□□□ -2.07
USO1YDL058W UPF3P48412 387 aaKnown RBP2.13□□□□□ -2.07
USO1YDL058W SPO71Q03868 1245 aa2.13□□□□□ -2.07
USO1YDL058W SNX41Q04053 625 aa2.13□□□□□ -2.07
USO1YDL058W CSM3Q04659 317 aa2.13□□□□□ -2.07
USO1YDL058W RNH1Q04740 348 aa2.13□□□□□ -2.07
USO1YDL058W MSC3Q05812 728 aa2.13□□□□□ -2.07
USO1YDL058W YOL036WQ08206 761 aa2.13□□□□□ -2.07
USO1YDL058W GRE2Q12068 342 aaKnown RBP2.13□□□□□ -2.07
USO1YDL058W WRS1Q12109 432 aaKnown RBP2.13□□□□□ -2.07
USO1YDL058W FYV7Q12247 151 aa2.13□□□□□ -2.07
USO1YDL058W SNU66Q12420 587 aaPredicted RBP2.13□□□□□ -2.07
USO1YDL058W YJR112W-AQ3E743 109 aa2.13□□□□□ -2.07
USO1YDL058W ARG82P07250 355 aa2.13□□□□□ -2.07
USO1YDL058W MIP1P15801 1254 aa2.13□□□□□ -2.07
USO1YDL058W HSP60P19882 572 aaKnown RBP2.13□□□□□ -2.07
USO1YDL058W SPE2P21182 396 aa2.13□□□□□ -2.07
USO1YDL058W CNA1P23287 553 aa2.13□□□□□ -2.07
USO1YDL058W PRD1P25375 712 aa2.13□□□□□ -2.07
USO1YDL058W DOM34P33309 386 aa2.13□□□□□ -2.07
USO1YDL058W YKR018CP36114 725 aa2.13□□□□□ -2.07
USO1YDL058W LDH1P38139 375 aa2.13□□□□□ -2.07
USO1YDL058W FUI1P38196 639 aa2.13□□□□□ -2.07
USO1YDL058W NCL1P38205 684 aaKnown RBP2.13□□□□□ -2.07
USO1YDL058W PIH1P38768 344 aa2.13□□□□□ -2.07
USO1YDL058W YJL068CP40363 299 aa2.13□□□□□ -2.07
USO1YDL058W CHS6P40955 746 aa2.13□□□□□ -2.07
USO1YDL058W FAR3P46671 204 aa2.13□□□□□ -2.07
USO1YDL058W AZR1P50080 613 aa2.13□□□□□ -2.07
USO1YDL058W PRP43P53131 767 aaKnown RBP2.13□□□□□ -2.07
USO1YDL058W PUS6P53294 404 aa2.13□□□□□ -2.07
USO1YDL058W DCP2P53550 970 aaKnown RBP2.13□□□□□ -2.07
USO1YDL058W YNL115CP53925 644 aa2.13□□□□□ -2.07
USO1YDL058W LGE1Q02796 332 aaKnown RBP2.13□□□□□ -2.07
USO1YDL058W HOT1Q03213 719 aa2.13□□□□□ -2.07
USO1YDL058W SAS4Q04003 481 aa2.13□□□□□ -2.07
USO1YDL058W VPS20Q04272 221 aa2.13□□□□□ -2.07
USO1YDL058W GTB1Q04924 702 aa2.13□□□□□ -2.07
USO1YDL058W PUS9Q12069 462 aa2.13□□□□□ -2.07
USO1YDL058W MMP1Q12372 583 aa2.13□□□□□ -2.07
USO1YDL058W FRT1Q99332 602 aa2.13□□□□□ -2.07
USO1YDL058W ESP1Q03018 1630 aa2.13□□□□□ -2.07
USO1YDL058W SSA3P09435 649 aaKnown RBP2.13□□□□□ -2.07
USO1YDL058W UBC1P21734 215 aaKnown RBP2.13□□□□□ -2.07
USO1YDL058W RRP7P25368 297 aaPredicted RBP2.13□□□□□ -2.07
USO1YDL058W GFD2P25370 566 aaKnown RBP2.13□□□□□ -2.07
USO1YDL058W SRO9P25567 434 aaKnown RBP2.13□□□□□ -2.07
USO1YDL058W GLG1P36143 616 aa2.13□□□□□ -2.07
USO1YDL058W GIP4P39732 760 aa2.13□□□□□ -2.07
USO1YDL058W AIM21P40563 679 aa2.13□□□□□ -2.07
USO1YDL058W POL32P47110 350 aa2.13□□□□□ -2.07
USO1YDL058W XPT1P47165 209 aa2.13□□□□□ -2.07
USO1YDL058W RFX1P48743 811 aa2.13□□□□□ -2.07
USO1YDL058W SSU72P53538 206 aaPredicted RBP2.13□□□□□ -2.07
USO1YDL058W MNT4P53745 580 aa2.13□□□□□ -2.07
USO1YDL058W MET14Q02196 202 aa2.13□□□□□ -2.07
USO1YDL058W SIZ1Q04195 904 aa2.13□□□□□ -2.07
USO1YDL058W CDC123Q05791 360 aa2.13□□□□□ -2.07
USO1YDL058W BLS1Q06071 122 aa2.13□□□□□ -2.07
USO1YDL058W EAF1Q06337 982 aa2.13□□□□□ -2.07
USO1YDL058W MCM21Q06675 368 aa2.13□□□□□ -2.07
USO1YDL058W DTD1Q07648 150 aaKnown RBP2.13□□□□□ -2.07
USO1YDL058W RRG1Q12167 365 aaPredicted RBP2.13□□□□□ -2.07
USO1YDL058W MET5P47169 1442 aa2.12□□□□□ -2.07
USO1YDL058W CDC25P04821 1589 aa2.12□□□□□ -2.07
USO1YDL058W FOB1O13329 566 aa2.12□□□□□ -2.07
USO1YDL058W LEU2P04173 364 aaPredicted RBP2.12□□□□□ -2.07
USO1YDL058W HIS5P07172 385 aa2.12□□□□□ -2.07
USO1YDL058W ARG8P18544 423 aa2.12□□□□□ -2.07
USO1YDL058W DBP5P20449 482 aaKnown RBP2.12□□□□□ -2.07
USO1YDL058W PRE9P23638 258 aaKnown RBP2.12□□□□□ -2.07
USO1YDL058W GAC1P28006 793 aa2.12□□□□□ -2.07
USO1YDL058W RTG2P32608 588 aaKnown RBP2.12□□□□□ -2.07
USO1YDL058W GLC3P32775 704 aa2.12□□□□□ -2.07
USO1YDL058W RAD5P32849 1169 aaPredicted RBP2.12□□□□□ -2.07
USO1YDL058W NUP133P36161 1157 aa2.12□□□□□ -2.07
USO1YDL058W RRM3P38766 723 aa2.12□□□□□ -2.07
USO1YDL058W LSM5P40089 93 aaKnown RBP2.12□□□□□ -2.07
USO1YDL058W YIL077CP40508 320 aa2.12□□□□□ -2.07
USO1YDL058W SEC28P40509 296 aaKnown RBP2.12□□□□□ -2.07
USO1YDL058W STR3P53101 465 aaKnown RBP2.12□□□□□ -2.07
USO1YDL058W CWC25P53854 179 aaKnown RBP2.12□□□□□ -2.07
USO1YDL058W SKO1Q02100 647 aa2.12□□□□□ -2.07
USO1YDL058W BRE4Q07660 1125 aa2.12□□□□□ -2.07
USO1YDL058W YOR296WQ08748 1289 aa2.12□□□□□ -2.07
USO1YDL058W RCN2Q12044 265 aa2.12□□□□□ -2.07
USO1YDL058W ULA1Q12059 462 aa2.12□□□□□ -2.07
USO1YDL058W NUS1Q12063 375 aa2.12□□□□□ -2.07
USO1YDL058W RRP36Q12481 300 aaPredicted RBP2.12□□□□□ -2.07
USO1YDL058W AVL9Q12500 764 aa2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 69.9 ms