RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W PRE10P21242 288 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
CKS1YBR135W LST4P34239 828 aa5.87□□□□□ -1.47
CKS1YBR135W CTF13P35203 478 aa5.87□□□□□ -1.47
CKS1YBR135W MCM21Q06675 368 aa5.87□□□□□ -1.47
CKS1YBR135W PEX15Q08215 383 aa5.87□□□□□ -1.47
CKS1YBR135W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
CKS1YBR135W PEP1P32319 1579 aa5.86□□□□□ -1.47
CKS1YBR135W ATG2P53855 1592 aa5.86□□□□□ -1.47
CKS1YBR135W PYC1P11154 1178 aaKnown RBP5.86□□□□□ -1.47
CKS1YBR135W IMG2P25642 146 aaPredicted RBP5.86□□□□□ -1.47
CKS1YBR135W HIR1P32479 840 aa5.86□□□□□ -1.47
CKS1YBR135W YKU70P32807 602 aa5.86□□□□□ -1.47
CKS1YBR135W APL2P36000 726 aaPredicted RBP5.86□□□□□ -1.47
CKS1YBR135W RPP1P38786 293 aa5.86□□□□□ -1.47
CKS1YBR135W DAS1P47005 663 aa5.86□□□□□ -1.47
CKS1YBR135W NOP15P53927 220 aaPredicted RBP5.86□□□□□ -1.47
CKS1YBR135W NRG1Q03125 231 aa5.86□□□□□ -1.47
CKS1YBR135W HMO1Q03973 246 aaKnown RBP5.86□□□□□ -1.47
CKS1YBR135W TMA10Q06177 86 aa5.86□□□□□ -1.47
CKS1YBR135W ENB1Q08299 606 aa5.86□□□□□ -1.47
CKS1YBR135W RPS17AP02407 136 aaKnown RBP5.85□□□□□ -1.47
CKS1YBR135W RPS17BP14127 136 aaKnown RBP5.85□□□□□ -1.47
CKS1YBR135W STE11P23561 717 aa5.85□□□□□ -1.47
CKS1YBR135W TOD6P34219 525 aa5.85□□□□□ -1.47
CKS1YBR135W VID28P40547 921 aa5.85□□□□□ -1.47
CKS1YBR135W MRPS35P53292 345 aa5.85□□□□□ -1.47
CKS1YBR135W ERG5P54781 538 aa5.85□□□□□ -1.47
CKS1YBR135W YMR210WQ03649 449 aa5.85□□□□□ -1.47
CKS1YBR135W LAS17Q12446 633 aa5.85□□□□□ -1.47
CKS1YBR135W TOP1P04786 769 aa5.84□□□□□ -1.47
CKS1YBR135W GLN4P13188 809 aaKnown RBP5.84□□□□□ -1.47
CKS1YBR135W CDC26P14724 124 aa5.84□□□□□ -1.47
CKS1YBR135W HCA4P20448 770 aaKnown RBP5.84□□□□□ -1.47
CKS1YBR135W ATP12P22135 325 aa5.84□□□□□ -1.47
CKS1YBR135W NIC96P34077 839 aa5.84□□□□□ -1.47
CKS1YBR135W TRZ1P36159 838 aaPredicted RBP5.84□□□□□ -1.47
CKS1YBR135W APT2P36973 181 aa5.84□□□□□ -1.47
CKS1YBR135W YHR112CP38716 378 aa5.84□□□□□ -1.47
CKS1YBR135W IES1P43579 692 aa5.84□□□□□ -1.47
CKS1YBR135W MET14Q02196 202 aa5.84□□□□□ -1.47
CKS1YBR135W REC102Q02721 264 aa5.84□□□□□ -1.47
CKS1YBR135W ECM38Q05902 660 aaPredicted RBP5.84□□□□□ -1.47
CKS1YBR135W YPS7Q06325 596 aa5.84□□□□□ -1.47
CKS1YBR135W ISA1Q07821 250 aaPredicted RBP5.84□□□□□ -1.47
CKS1YBR135W TGL5Q12043 749 aa5.84□□□□□ -1.47
CKS1YBR135W CAD1P24813 409 aaKnown RBP5.83□□□□□ -1.48
CKS1YBR135W TEX1P53851 422 aaKnown RBP5.83□□□□□ -1.48
CKS1YBR135W NYV1Q12255 253 aa5.83□□□□□ -1.48
CKS1YBR135W PET127P32606 800 aa5.82□□□□□ -1.48
CKS1YBR135W ELM1P32801 640 aa5.82□□□□□ -1.48
CKS1YBR135W THI80P35202 319 aa5.82□□□□□ -1.48
CKS1YBR135W RSC8P43609 557 aaKnown RBP5.82□□□□□ -1.48
CKS1YBR135W PIP2P52960 996 aa5.82□□□□□ -1.48
CKS1YBR135W VHS3Q08438 674 aa5.82□□□□□ -1.48
CKS1YBR135W SIN3P22579 1536 aa5.82□□□□□ -1.48
CKS1YBR135W YEF3P16521 1044 aaKnown RBP5.81□□□□□ -1.48
CKS1YBR135W IME1P21190 360 aa5.81□□□□□ -1.48
CKS1YBR135W RNQ1P25367 405 aa5.81□□□□□ -1.48
CKS1YBR135W KCC4P25389 1037 aa5.81□□□□□ -1.48
CKS1YBR135W HXT4P32467 576 aa5.81□□□□□ -1.48
CKS1YBR135W YPT7P32939 208 aa5.81□□□□□ -1.48
CKS1YBR135W RRP8P38961 392 aaKnown RBP5.81□□□□□ -1.48
CKS1YBR135W FKH2P41813 862 aa5.81□□□□□ -1.48
CKS1YBR135W MNN10P50108 393 aaKnown RBP5.81□□□□□ -1.48
CKS1YBR135W GAD1Q04792 585 aa5.81□□□□□ -1.48
CKS1YBR135W STP4Q07351 490 aa5.81□□□□□ -1.48
CKS1YBR135W SKI3P17883 1432 aaKnown RBP5.81□□□□□ -1.48
CKS1YBR135W TAF2P23255 1407 aa5.81□□□□□ -1.48
CKS1YBR135W YLR358CO13565 187 aa5.8□□□□□ -1.48
CKS1YBR135W GAL1P04385 528 aa5.8□□□□□ -1.48
CKS1YBR135W PIF1P07271 859 aa5.8□□□□□ -1.48
CKS1YBR135W FRS1P15624 595 aaKnown RBP5.8□□□□□ -1.48
CKS1YBR135W ACO1P19414 778 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
CKS1YBR135W RNR1P21524 888 aaKnown RBP5.8□□□□□ -1.48
CKS1YBR135W MF(ALPHA)2P32435 120 aa5.8□□□□□ -1.48
CKS1YBR135W PMC1P38929 1173 aaPredicted RBP5.8□□□□□ -1.48
CKS1YBR135W DUN1P39009 513 aa5.8□□□□□ -1.48
CKS1YBR135W MCM6P53091 1017 aaKnown RBP5.8□□□□□ -1.48
CKS1YBR135W RCR2Q03446 210 aaKnown RBP5.8□□□□□ -1.48
CKS1YBR135W MLC2Q06580 163 aa5.8□□□□□ -1.48
CKS1YBR135W NGL1Q08213 363 aaKnown RBP5.8□□□□□ -1.48
CKS1YBR135W SGO1Q08490 590 aa5.8□□□□□ -1.48
CKS1YBR135W ATG11Q12527 1178 aa5.8□□□□□ -1.48
CKS1YBR135W BPT1P14772 1559 aa5.8□□□□□ -1.48
CKS1YBR135W TRP4P07285 380 aaPredicted RBP5.79□□□□□ -1.48
CKS1YBR135W ERG6P25087 383 aaKnown RBP5.79□□□□□ -1.48
CKS1YBR135W PTP2P29461 750 aa5.79□□□□□ -1.48
CKS1YBR135W DCG1P32460 244 aa5.79□□□□□ -1.48
CKS1YBR135W YNL195CP40168 261 aa5.79□□□□□ -1.48
CKS1YBR135W ENP2P48234 707 aaKnown RBP5.79□□□□□ -1.48
CKS1YBR135W BUL1P48524 976 aa5.79□□□□□ -1.48
CKS1YBR135W HOL1P53389 586 aa5.79□□□□□ -1.48
CKS1YBR135W CNM67P53865 581 aaKnown RBP5.79□□□□□ -1.48
CKS1YBR135W VPS36Q06696 566 aa5.79□□□□□ -1.48
CKS1YBR135W HRP1Q99383 534 aaKnown RBP5.79□□□□□ -1.48
CKS1YBR135W YKL133CP36066 463 aa5.78□□□□□ -1.48
CKS1YBR135W VPS24P36095 224 aaKnown RBP5.78□□□□□ -1.48
CKS1YBR135W SRP68P38687 599 aaKnown RBP5.78□□□□□ -1.48
CKS1YBR135W IRC5P43610 853 aa5.78□□□□□ -1.48
CKS1YBR135W NOP9P47077 666 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms