RNA–Protein interactions for RNA: YBR030W

RKM3, Transcript of Ribosomal lysine methyltransferase, yeast

Gene RKM3, Length 1,659 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RKM3	YBR030W	NOP16	P40007	231 aa	Known RBP	4.83	□□□□□ -1.64
RKM3	YBR030W	SCS2	P40075	244 aa	Known RBP	4.83	□□□□□ -1.64
RKM3	YBR030W	RSC1	P53236	928 aa		4.83	□□□□□ -1.64
RKM3	YBR030W	SDH1	Q00711	640 aa		4.83	□□□□□ -1.64
RKM3	YBR030W	YPL034W	Q03083	165 aa		4.83	□□□□□ -1.64
RKM3	YBR030W	EAR1	Q03212	550 aa		4.83	□□□□□ -1.64
RKM3	YBR030W	GRC3	Q07845	632 aa		4.83	□□□□□ -1.64
RKM3	YBR030W	HAL9	Q12180	1030 aa		4.83	□□□□□ -1.64
RKM3	YBR030W	SNF1	P06782	633 aa	Known RBP	4.83	□□□□□ -1.64
RKM3	YBR030W	MTF2	P10849	440 aa		4.83	□□□□□ -1.64
RKM3	YBR030W	YCL049C	P25577	312 aa		4.83	□□□□□ -1.64
RKM3	YBR030W	RPD3	P32561	433 aa		4.83	□□□□□ -1.64
RKM3	YBR030W	TYE7	P33122	291 aa	Predicted RBP	4.83	□□□□□ -1.64
RKM3	YBR030W	PGM1	P33401	570 aa	Known RBP	4.83	□□□□□ -1.64
RKM3	YBR030W	TGL1	P34163	548 aa		4.83	□□□□□ -1.64
RKM3	YBR030W	NUP120	P35729	1037 aa		4.83	□□□□□ -1.64
RKM3	YBR030W	BCD1	P38772	366 aa		4.83	□□□□□ -1.64
RKM3	YBR030W	AXL2	P38928	823 aa		4.83	□□□□□ -1.64
RKM3	YBR030W	SWD1	P39706	426 aa		4.83	□□□□□ -1.64
RKM3	YBR030W	KAP123	P40069	1113 aa	Known RBP	4.83	□□□□□ -1.64
RKM3	YBR030W	DPH1	P40487	425 aa	Known RBP	4.83	□□□□□ -1.64
RKM3	YBR030W	SGM1	P47166	707 aa		4.83	□□□□□ -1.64
RKM3	YBR030W	YLR407W	Q06070	228 aa		4.83	□□□□□ -1.64
RKM3	YBR030W	MCH5	Q08777	521 aa		4.83	□□□□□ -1.64
RKM3	YBR030W	ENT1	Q12518	454 aa		4.83	□□□□□ -1.64
RKM3	YBR030W	RPS4A	P0CX35	261 aa	Known RBP	4.82	□□□□□ -1.64
RKM3	YBR030W	RPS4B	P0CX36	261 aa	Known RBP	4.82	□□□□□ -1.64
RKM3	YBR030W	MRP7	P12687	371 aa		4.82	□□□□□ -1.64
RKM3	YBR030W	RSC6	P25632	483 aa		4.82	□□□□□ -1.64
RKM3	YBR030W	POA1	P38218	177 aa		4.82	□□□□□ -1.64
RKM3	YBR030W	PUG1	P40100	303 aa		4.82	□□□□□ -1.64
RKM3	YBR030W	IMA5	P40884	581 aa		4.82	□□□□□ -1.64
RKM3	YBR030W	CPR6	P53691	371 aa	Known RBP	4.82	□□□□□ -1.64
RKM3	YBR030W	MRPL13	Q02204	264 aa		4.82	□□□□□ -1.64
RKM3	YBR030W	LEE1	Q02799	301 aa	Known RBP	4.82	□□□□□ -1.64
RKM3	YBR030W	TFC6	Q06339	672 aa		4.82	□□□□□ -1.64
RKM3	YBR030W	SVS1	Q12254	260 aa		4.82	□□□□□ -1.64
RKM3	YBR030W	HIF1	Q12373	385 aa		4.82	□□□□□ -1.64
RKM3	YBR030W	SAM35	P14693	329 aa		4.81	□□□□□ -1.64
RKM3	YBR030W	GUK1	P15454	187 aa	Known RBP	4.81	□□□□□ -1.64
RKM3	YBR030W	ADP1	P25371	1049 aa		4.81	□□□□□ -1.64
RKM3	YBR030W	YKR075C	P36155	307 aa		4.81	□□□□□ -1.64
RKM3	YBR030W	PPE1	P38796	400 aa		4.81	□□□□□ -1.64
RKM3	YBR030W	DUN1	P39009	513 aa		4.81	□□□□□ -1.64
RKM3	YBR030W	RAI1	P53063	387 aa	Known RBP	4.81	□□□□□ -1.64
RKM3	YBR030W	YAP1802	P53309	568 aa		4.81	□□□□□ -1.64
RKM3	YBR030W	SXM1	Q04175	944 aa	Known RBP	4.81	□□□□□ -1.64
RKM3	YBR030W	ARA2	Q04212	335 aa		4.81	□□□□□ -1.64
RKM3	YBR030W	VID22	Q05934	901 aa		4.81	□□□□□ -1.64
RKM3	YBR030W	RPS17A	P02407	136 aa	Known RBP	4.8	□□□□□ -1.64
RKM3	YBR030W	NUC1	P08466	329 aa		4.8	□□□□□ -1.64
RKM3	YBR030W	YEL076C-A	P0CX16	216 aa		4.8	□□□□□ -1.64
RKM3	YBR030W	YLR464W	P0CX17	216 aa		4.8	□□□□□ -1.64
RKM3	YBR030W	RPS17B	P14127	136 aa	Known RBP	4.8	□□□□□ -1.64
RKM3	YBR030W	MET8	P15807	274 aa		4.8	□□□□□ -1.64
RKM3	YBR030W	MF(ALPHA)2	P32435	120 aa		4.8	□□□□□ -1.64
RKM3	YBR030W	RPS0A	P32905	252 aa	Known RBP	4.8	□□□□□ -1.64
RKM3	YBR030W	AKL1	P38080	1108 aa	Known RBP	4.8	□□□□□ -1.64
RKM3	YBR030W	UBS1	P38290	277 aa		4.8	□□□□□ -1.64
RKM3	YBR030W	YEL076C	P39971	216 aa		4.8	□□□□□ -1.64
RKM3	YBR030W	YEL068C	P39977	110 aa		4.8	□□□□□ -1.64
RKM3	YBR030W	RIC1	P40395	1056 aa		4.8	□□□□□ -1.64
RKM3	YBR030W	RRT6	P53117	311 aa	Predicted RBP	4.8	□□□□□ -1.64
RKM3	YBR030W	DUS1	P53759	423 aa	Known RBP	4.8	□□□□□ -1.64
RKM3	YBR030W	GPD1	Q00055	391 aa	Known RBP	4.8	□□□□□ -1.64
RKM3	YBR030W	GSF2	Q04697	403 aa	Known RBP	4.8	□□□□□ -1.64
RKM3	YBR030W	RTK1	Q12100	620 aa	Predicted RBP	4.8	□□□□□ -1.64
RKM3	YBR030W	VAS1	P07806	1104 aa	Known RBP	4.8	□□□□□ -1.64
RKM3	YBR030W	UBC1	P21734	215 aa	Known RBP	4.8	□□□□□ -1.64
RKM3	YBR030W	DGR2	P32330	852 aa		4.8	□□□□□ -1.64
RKM3	YBR030W	YHL012W	P38709	493 aa		4.8	□□□□□ -1.64
RKM3	YBR030W	VHR1	P40522	640 aa		4.8	□□□□□ -1.64
RKM3	YBR030W	FAF1	P40546	346 aa	Predicted RBP	4.8	□□□□□ -1.64
RKM3	YBR030W	ARI1	P53111	347 aa	Known RBP	4.8	□□□□□ -1.64
RKM3	YBR030W	PUS2	P53167	370 aa		4.8	□□□□□ -1.64
RKM3	YBR030W	RBG2	P53295	368 aa	Known RBP	4.8	□□□□□ -1.64
RKM3	YBR030W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
RKM3	YBR030W	TDA9	Q04545	1251 aa		4.8	□□□□□ -1.64
RKM3	YBR030W	SSL1	Q04673	461 aa	Predicted RBP	4.8	□□□□□ -1.64
RKM3	YBR030W	SPN1	Q06505	410 aa	Predicted RBP	4.8	□□□□□ -1.64
RKM3	YBR030W	TRM8	Q12009	286 aa		4.8	□□□□□ -1.64
RKM3	YBR030W	PHO5	P00635	467 aa		4.79	□□□□□ -1.64
RKM3	YBR030W	CBP3	P21560	335 aa		4.79	□□□□□ -1.64
RKM3	YBR030W	MCM3	P24279	971 aa	Known RBP	4.79	□□□□□ -1.64
RKM3	YBR030W	SRO9	P25567	434 aa	Known RBP	4.79	□□□□□ -1.64
RKM3	YBR030W	DHR2	P36009	735 aa	Predicted RBP	4.79	□□□□□ -1.64
RKM3	YBR030W	IFA38	P38286	347 aa		4.79	□□□□□ -1.64
RKM3	YBR030W	MIP6	P38760	659 aa	Known RBP	4.79	□□□□□ -1.64
RKM3	YBR030W	STT3	P39007	718 aa	Known RBP	4.79	□□□□□ -1.64
RKM3	YBR030W	MAD2	P40958	196 aa		4.79	□□□□□ -1.64
RKM3	YBR030W	TIM10	P87108	93 aa		4.79	□□□□□ -1.64
RKM3	YBR030W	YKU80	Q04437	629 aa		4.79	□□□□□ -1.64
RKM3	YBR030W	YPS7	Q06325	596 aa		4.79	□□□□□ -1.64
RKM3	YBR030W	RSB1	Q08417	382 aa		4.79	□□□□□ -1.64
RKM3	YBR030W	SCM3	Q12334	223 aa		4.79	□□□□□ -1.64
RKM3	YBR030W	LEU2	P04173	364 aa	Predicted RBP	4.78	□□□□□ -1.64
RKM3	YBR030W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
RKM3	YBR030W	IMG2	P25642	146 aa	Predicted RBP	4.78	□□□□□ -1.64
RKM3	YBR030W	RPT3	P33298	428 aa	Known RBP	4.78	□□□□□ -1.64
RKM3	YBR030W	MDL2	P33311	773 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms