RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 CYLC1P35663 651 aaPredicted RBP16.76■□□□□ 0.27
HNRNPU-226ENST00000640218 HELBQ8NG08 1087 aaPredicted RBP16.76■□□□□ 0.27
HNRNPU-226ENST00000640218 DACT1Q9NYF0 836 aa16.76■□□□□ 0.27
HNRNPU-226ENST00000640218 PTGS1P23219 599 aa16.76■□□□□ 0.27
HNRNPU-226ENST00000640218 MAGEB6Q8N7X4 407 aa16.76■□□□□ 0.27
HNRNPU-226ENST00000640218 RGS22Q8NE09 1264 aa16.76■□□□□ 0.27
HNRNPU-226ENST00000640218 PLS1Q14651 629 aa16.76■□□□□ 0.27
HNRNPU-226ENST00000640218 PPP4R3BQ5MIZ7 849 aa16.76■□□□□ 0.27
HNRNPU-226ENST00000640218 MIGA1Q8NAN2 632 aa16.76■□□□□ 0.27
HNRNPU-226ENST00000640218 CWF19L2Q2TBE0 894 aaKnown RBP16.76■□□□□ 0.27
HNRNPU-226ENST00000640218 TRAF1Q13077 416 aa16.75■□□□□ 0.27
HNRNPU-226ENST00000640218 PAXBP1Q9Y5B6 917 aa16.75■□□□□ 0.27
HNRNPU-226ENST00000640218 F13A1P00488 732 aa16.75■□□□□ 0.27
HNRNPU-226ENST00000640218 GIMAP7Q8NHV1 300 aa16.75■□□□□ 0.27
HNRNPU-226ENST00000640218 NYXQ9GZU5 481 aa16.75■□□□□ 0.27
HNRNPU-226ENST00000640218 PARP3Q9Y6F1 533 aa16.75■□□□□ 0.27
HNRNPU-226ENST00000640218 GTF2F1P35269 517 aaKnown RBP eCLIP16.75■□□□□ 0.279e-8■■■□□ 18.9
HNRNPU-226ENST00000640218 DNAJC25Q9H1X3 360 aa16.75■□□□□ 0.27
HNRNPU-226ENST00000640218 PSMA7O14818 248 aa16.75■□□□□ 0.27
HNRNPU-226ENST00000640218 PKNOX2Q96KN3 472 aa16.74■□□□□ 0.27
HNRNPU-226ENST00000640218 IKBKGQ9Y6K9 419 aa16.74■□□□□ 0.27
HNRNPU-226ENST00000640218 HSF2BPO75031 334 aa16.74■□□□□ 0.27
HNRNPU-226ENST00000640218 CCDC171Q6TFL3 1326 aa16.74■□□□□ 0.27
HNRNPU-226ENST00000640218 USP37Q86T82 979 aa16.74■□□□□ 0.27
HNRNPU-226ENST00000640218 VEZTQ9HBM0 779 aa16.74■□□□□ 0.27
HNRNPU-226ENST00000640218 C6orf50Q9HD87 102 aa16.74■□□□□ 0.27
HNRNPU-226ENST00000640218 MRVI1Q9Y6F6 885 aa16.74■□□□□ 0.27
HNRNPU-226ENST00000640218 RNF113AO15541 343 aaKnown RBP16.74■□□□□ 0.27
HNRNPU-226ENST00000640218 SKILP12757 684 aa16.74■□□□□ 0.27
HNRNPU-226ENST00000640218 APOBRQ0VD83 1088 aa16.74■□□□□ 0.27
HNRNPU-226ENST00000640218 TRERF1Q96PN7 1200 aa16.74■□□□□ 0.27
HNRNPU-226ENST00000640218 MCM9Q9NXL9 1143 aa16.74■□□□□ 0.27
HNRNPU-226ENST00000640218 NCKAP5LQ9HCH0 1330 aa16.74■□□□□ 0.27
HNRNPU-226ENST00000640218 IL2RBP14784 551 aa16.74■□□□□ 0.27
HNRNPU-226ENST00000640218 TFCP2Q12800 502 aa16.74■□□□□ 0.27
HNRNPU-226ENST00000640218 POLKQ9UBT6 870 aa16.74■□□□□ 0.27
HNRNPU-226ENST00000640218 TRIM75PA6NK02 468 aa16.73■□□□□ 0.27
HNRNPU-226ENST00000640218 IRS4O14654 1257 aaPredicted RBP16.73■□□□□ 0.27
HNRNPU-226ENST00000640218 FAM107BQ9H098 131 aa16.73■□□□□ 0.27
HNRNPU-226ENST00000640218 ARID5AQ03989 594 aa16.73■□□□□ 0.27
HNRNPU-226ENST00000640218 CEP112Q8N8E3 955 aa16.73■□□□□ 0.27
HNRNPU-226ENST00000640218 RRP36Q96EU6 259 aaKnown RBP16.73■□□□□ 0.27
HNRNPU-226ENST00000640218 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.73■□□□□ 0.271e-9■■■■■ 34.7
HNRNPU-226ENST00000640218 RTL1A6NKG5 1358 aa16.73■□□□□ 0.27
HNRNPU-226ENST00000640218 CKAP4Q07065 602 aaKnown RBP16.73■□□□□ 0.27
HNRNPU-226ENST00000640218 TSNARE1Q96NA8 513 aa16.73■□□□□ 0.27
HNRNPU-226ENST00000640218 LINS1Q8NG48 757 aa16.73■□□□□ 0.27
HNRNPU-226ENST00000640218 PLVAPQ9BX97 442 aa16.73■□□□□ 0.27
HNRNPU-226ENST00000640218 TNNQ9UQP3 1299 aa16.73■□□□□ 0.27
HNRNPU-226ENST00000640218 UHRF1BP1LA0JNW5 1464 aa16.73■□□□□ 0.27
HNRNPU-226ENST00000640218 SPTLC2O15270 562 aa16.73■□□□□ 0.27
HNRNPU-226ENST00000640218 GNAT2P19087 354 aa16.73■□□□□ 0.27
HNRNPU-226ENST00000640218 KRT2P35908 639 aa16.73■□□□□ 0.27
HNRNPU-226ENST00000640218 CCDC186Q7Z3E2 898 aa16.73■□□□□ 0.27
HNRNPU-226ENST00000640218 RTL9Q8NET4 1388 aa16.72■□□□□ 0.27
HNRNPU-226ENST00000640218 TSPYL6Q8N831 410 aa16.72■□□□□ 0.27
HNRNPU-226ENST00000640218 ZC3H12CQ9C0D7 883 aaKnown RBP16.72■□□□□ 0.27
HNRNPU-226ENST00000640218 GPATCH8Q9UKJ3 1502 aaKnown RBP16.72■□□□□ 0.27
HNRNPU-226ENST00000640218 SPDYE3A6NKU9 549 aa16.72■□□□□ 0.27
HNRNPU-226ENST00000640218 BBXQ8WY36 941 aaPredicted RBP16.72■□□□□ 0.27
HNRNPU-226ENST00000640218 STK32BQ9NY57 414 aa16.72■□□□□ 0.27
HNRNPU-226ENST00000640218 NSFL1CQ9UNZ2 370 aaKnown RBP16.72■□□□□ 0.27
HNRNPU-226ENST00000640218 RIMS2Q9UQ26 1411 aa16.72■□□□□ 0.27
HNRNPU-226ENST00000640218 RIMBP2O15034 1052 aa16.72■□□□□ 0.27
HNRNPU-226ENST00000640218 SPAG1Q07617 926 aa16.72■□□□□ 0.27
HNRNPU-226ENST00000640218 KRT24Q2M2I5 525 aa16.72■□□□□ 0.27
HNRNPU-226ENST00000640218 TPTE2Q6XPS3 522 aa16.72■□□□□ 0.27
HNRNPU-226ENST00000640218 GIGYF2Q6Y7W6 1299 aaKnown RBP16.72■□□□□ 0.27
HNRNPU-226ENST00000640218 FAM200AQ8TCP9 573 aa16.72■□□□□ 0.27
HNRNPU-226ENST00000640218 DNAI1Q9UI46 699 aa16.72■□□□□ 0.27
HNRNPU-226ENST00000640218 TTC41PQ6P2S7 1318 aa16.72■□□□□ 0.27
HNRNPU-226ENST00000640218 CEP85Q6P2H3 762 aa16.72■□□□□ 0.27
HNRNPU-226ENST00000640218 PPP1R14CQ8TAE6 165 aa16.72■□□□□ 0.27
HNRNPU-226ENST00000640218 JAG2Q9Y219 1238 aa16.72■□□□□ 0.27
HNRNPU-226ENST00000640218 CREB3L3Q68CJ9 461 aa16.72■□□□□ 0.27
HNRNPU-226ENST00000640218 ZNF354CQ86Y25 554 aa16.72■□□□□ 0.27
HNRNPU-226ENST00000640218 SELENOOQ9BVL4 669 aa16.72■□□□□ 0.27
HNRNPU-226ENST00000640218 A0A1W2PRG0 241 aa16.71■□□□□ 0.27
HNRNPU-226ENST00000640218 MCM7P33993 719 aa16.71■□□□□ 0.27
HNRNPU-226ENST00000640218 AK2P54819 239 aa16.71■□□□□ 0.27
HNRNPU-226ENST00000640218 BMS1Q14692 1282 aaKnown RBP16.71■□□□□ 0.27
HNRNPU-226ENST00000640218 CEP63Q96MT8 703 aa16.71■□□□□ 0.27
HNRNPU-226ENST00000640218 TCHPQ9BT92 498 aa16.71■□□□□ 0.27
HNRNPU-226ENST00000640218 TNNI2P48788 182 aa16.71■□□□□ 0.27
HNRNPU-226ENST00000640218 CCDC155Q8N6L0 562 aa16.71■□□□□ 0.27
HNRNPU-226ENST00000640218 RTCBQ9Y3I0 505 aaKnown RBP16.71■□□□□ 0.27
HNRNPU-226ENST00000640218 RXRAP19793 462 aa16.71■□□□□ 0.27
HNRNPU-226ENST00000640218 SYT1P21579 422 aa16.71■□□□□ 0.27
HNRNPU-226ENST00000640218 CALML3P27482 149 aa16.71■□□□□ 0.27
HNRNPU-226ENST00000640218 SPECC1LQ69YQ0 1117 aa16.71■□□□□ 0.27
HNRNPU-226ENST00000640218 TICAM2Q86XR7 235 aa16.71■□□□□ 0.26
HNRNPU-226ENST00000640218 TMEM110-MUSTN1A8MSY1 372 aa16.7■□□□□ 0.26
HNRNPU-226ENST00000640218 GJC1P36383 396 aa16.7■□□□□ 0.26
HNRNPU-226ENST00000640218 KRT79Q5XKE5 535 aa16.7■□□□□ 0.26
HNRNPU-226ENST00000640218 JDP2Q8WYK2 163 aa16.7■□□□□ 0.26
HNRNPU-226ENST00000640218 FAM212AQ96EL1 285 aa16.7■□□□□ 0.26
HNRNPU-226ENST00000640218 BICC1Q9H694 974 aaKnown RBP16.7■□□□□ 0.26
HNRNPU-226ENST00000640218 DUOX2Q9NRD8 1548 aa16.7■□□□□ 0.26
HNRNPU-226ENST00000640218 PABPN1LA6NDY0 278 aaKnown RBP16.7■□□□□ 0.26
HNRNPU-226ENST00000640218 CALCOCO1Q9P1Z2 691 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms