RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 BRD7Q9NPI1 651 aa5.59□□□□□ -1.51
IGHV3-29-201ENST00000604817 SEPT3Q9UH03 358 aa5.59□□□□□ -1.51
IGHV3-29-201ENST00000604817 POLA1P09884 1462 aaPredicted RBP5.58□□□□□ -1.52
IGHV3-29-201ENST00000604817 MAGI1Q96QZ7 1491 aaPredicted RBP5.58□□□□□ -1.52
IGHV3-29-201ENST00000604817 P4HBP07237 508 aaKnown RBP5.58□□□□□ -1.52
IGHV3-29-201ENST00000604817 BRD2P25440 801 aaKnown RBP5.58□□□□□ -1.52
IGHV3-29-201ENST00000604817 MBTPS1Q14703 1052 aa5.58□□□□□ -1.52
IGHV3-29-201ENST00000604817 ABTB2Q8N961 1025 aa5.58□□□□□ -1.52
IGHV3-29-201ENST00000604817 LENG1Q96BZ8 264 aaPredicted RBP5.58□□□□□ -1.52
IGHV3-29-201ENST00000604817 CEP63Q96MT8 703 aa5.58□□□□□ -1.52
IGHV3-29-201ENST00000604817 PRKAG2Q9UGJ0 569 aa5.58□□□□□ -1.52
IGHV3-29-201ENST00000604817 KCNH4Q9UQ05 1017 aa5.58□□□□□ -1.52
IGHV3-29-201ENST00000604817 SNAPC4Q5SXM2 1469 aa5.58□□□□□ -1.52
IGHV3-29-201ENST00000604817 RAD54L2Q9Y4B4 1467 aa5.58□□□□□ -1.52
IGHV3-29-201ENST00000604817 MARCH6O60337 910 aa5.57□□□□□ -1.52
IGHV3-29-201ENST00000604817 LGR5O75473 907 aa5.57□□□□□ -1.52
IGHV3-29-201ENST00000604817 RTN1Q16799 776 aa5.57□□□□□ -1.52
IGHV3-29-201ENST00000604817 CCDC144BQ3MJ40 725 aa5.57□□□□□ -1.52
IGHV3-29-201ENST00000604817 EGFLAMQ63HQ2 1017 aa5.57□□□□□ -1.52
IGHV3-29-201ENST00000604817 C8orf86Q6ZUL3 223 aa5.57□□□□□ -1.52
IGHV3-29-201ENST00000604817 NT5DC4Q86YG4 428 aa5.57□□□□□ -1.52
IGHV3-29-201ENST00000604817 KRTAP1-3Q8IUG1 177 aa5.57□□□□□ -1.52
IGHV3-29-201ENST00000604817 DHX38Q92620 1227 aaKnown RBP5.57□□□□□ -1.52
IGHV3-29-201ENST00000604817 TMA7Q9Y2S6 64 aaKnown RBP5.57□□□□□ -1.52
IGHV3-29-201ENST00000604817 SYNJ2O15056 1496 aa5.57□□□□□ -1.52
IGHV3-29-201ENST00000604817 WDR97A6NE52 1622 aa5.56□□□□□ -1.52
IGHV3-29-201ENST00000604817 ARID4BQ4LE39 1312 aaPredicted RBP5.56□□□□□ -1.52
IGHV3-29-201ENST00000604817 A0A0A0MRY4 1105 aa5.56□□□□□ -1.52
IGHV3-29-201ENST00000604817 SELPP16109 830 aa5.56□□□□□ -1.52
IGHV3-29-201ENST00000604817 MTMR3Q13615 1198 aa5.56□□□□□ -1.52
IGHV3-29-201ENST00000604817 TMEM87AQ8NBN3 555 aa5.56□□□□□ -1.52
IGHV3-29-201ENST00000604817 CITED4Q96RK1 184 aa5.56□□□□□ -1.52
IGHV3-29-201ENST00000604817 TGIF2Q9GZN2 237 aa5.56□□□□□ -1.52
IGHV3-29-201ENST00000604817 NLRP2Q9NX02 1062 aa5.56□□□□□ -1.52
IGHV3-29-201ENST00000604817 STIM2Q9P246 746 aa5.56□□□□□ -1.52
IGHV3-29-201ENST00000604817 GRIN2BQ13224 1484 aa5.56□□□□□ -1.52
IGHV3-29-201ENST00000604817 KIF13AQ9H1H9 1805 aa5.55□□□□□ -1.52
IGHV3-29-201ENST00000604817 NDUFB5O43674 189 aa5.55□□□□□ -1.52
IGHV3-29-201ENST00000604817 ATP2B1P20020 1258 aa5.55□□□□□ -1.52
IGHV3-29-201ENST00000604817 TYRO3Q06418 890 aa5.55□□□□□ -1.52
IGHV3-29-201ENST00000604817 NAA30Q147X3 362 aaPredicted RBP5.55□□□□□ -1.52
IGHV3-29-201ENST00000604817 TBCELQ5QJ74 424 aa5.55□□□□□ -1.52
IGHV3-29-201ENST00000604817 CAPN12Q6ZSI9 719 aa5.55□□□□□ -1.52
IGHV3-29-201ENST00000604817 TMC7Q7Z402 723 aa5.55□□□□□ -1.52
IGHV3-29-201ENST00000604817 RAB44Q7Z6P3 723 aaPredicted RBP5.55□□□□□ -1.52
IGHV3-29-201ENST00000604817 ARMC5Q96C12 935 aa5.55□□□□□ -1.52
IGHV3-29-201ENST00000604817 GMLQ99445 158 aa5.55□□□□□ -1.52
IGHV3-29-201ENST00000604817 RBCK1Q9BYM8 510 aa5.55□□□□□ -1.52
IGHV3-29-201ENST00000604817 UBE2OQ9C0C9 1292 aaKnown RBP5.55□□□□□ -1.52
IGHV3-29-201ENST00000604817 PHACTR1Q9C0D0 580 aa5.55□□□□□ -1.52
IGHV3-29-201ENST00000604817 PIF1Q9H611 641 aa5.55□□□□□ -1.52
IGHV3-29-201ENST00000604817 QTRT2Q9H974 415 aaKnown RBP5.55□□□□□ -1.52
IGHV3-29-201ENST00000604817 SLC6A14Q9UN76 642 aa5.55□□□□□ -1.52
IGHV3-29-201ENST00000604817 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.55□□□□□ -1.52
IGHV3-29-201ENST00000604817 TBX22Q9Y458 520 aa5.55□□□□□ -1.52
IGHV3-29-201ENST00000604817 GTF2F1P35269 517 aaKnown RBP eCLIP5.54□□□□□ -1.52
IGHV3-29-201ENST00000604817 FANCCQ00597 558 aa5.54□□□□□ -1.52
IGHV3-29-201ENST00000604817 FMR1Q06787 632 aaKnown RBP eCLIP5.54□□□□□ -1.52
IGHV3-29-201ENST00000604817 RBL2Q08999 1139 aa5.54□□□□□ -1.52
IGHV3-29-201ENST00000604817 C11orf91Q3C1V1 193 aa5.54□□□□□ -1.52
IGHV3-29-201ENST00000604817 COX20Q5RI15 118 aa5.54□□□□□ -1.52
IGHV3-29-201ENST00000604817 SH3PXD2AQ5TCZ1 1133 aa5.54□□□□□ -1.52
IGHV3-29-201ENST00000604817 SDE2Q6IQ49 451 aa5.54□□□□□ -1.52
IGHV3-29-201ENST00000604817 NOL8Q76FK4 1167 aaKnown RBP5.54□□□□□ -1.52
IGHV3-29-201ENST00000604817 ALDH16A1Q8IZ83 802 aa5.54□□□□□ -1.52
IGHV3-29-201ENST00000604817 BHMTQ93088 406 aa5.54□□□□□ -1.52
IGHV3-29-201ENST00000604817 GPATCH3Q96I76 525 aa5.54□□□□□ -1.52
IGHV3-29-201ENST00000604817 SUSD3Q96L08 255 aa5.54□□□□□ -1.52
IGHV3-29-201ENST00000604817 KRTAP4-12Q9BQ66 201 aa5.54□□□□□ -1.52
IGHV3-29-201ENST00000604817 CAPN10Q9HC96 672 aa5.54□□□□□ -1.52
IGHV3-29-201ENST00000604817 JPH1Q9HDC5 661 aaPredicted RBP5.54□□□□□ -1.52
IGHV3-29-201ENST00000604817 METTL5Q9NRN9 209 aaKnown RBP5.54□□□□□ -1.52
IGHV3-29-201ENST00000604817 TREHO43280 583 aa5.53□□□□□ -1.52
IGHV3-29-201ENST00000604817 RAB11FIP3O75154 756 aa5.53□□□□□ -1.52
IGHV3-29-201ENST00000604817 MPSTP25325 297 aa5.53□□□□□ -1.52
IGHV3-29-201ENST00000604817 USP5P45974 858 aa5.53□□□□□ -1.52
IGHV3-29-201ENST00000604817 FGD1P98174 961 aa5.53□□□□□ -1.52
IGHV3-29-201ENST00000604817 PCSK7Q16549 785 aa5.53□□□□□ -1.52
IGHV3-29-201ENST00000604817 LCE3BQ5TA77 95 aa5.53□□□□□ -1.52
IGHV3-29-201ENST00000604817 FMR1NBQ8N0W7 255 aaPredicted RBP5.53□□□□□ -1.52
IGHV3-29-201ENST00000604817 DTWD1Q8N5C7 304 aa5.53□□□□□ -1.52
IGHV3-29-201ENST00000604817 RNF34Q969K3 372 aa5.53□□□□□ -1.52
IGHV3-29-201ENST00000604817 TP53INP1Q96A56 240 aa5.53□□□□□ -1.52
IGHV3-29-201ENST00000604817 HSH2DQ96JZ2 352 aa5.53□□□□□ -1.52
IGHV3-29-201ENST00000604817 SPACA7Q96KW9 195 aa5.53□□□□□ -1.52
IGHV3-29-201ENST00000604817 FAM161BQ96MY7 647 aa5.53□□□□□ -1.52
IGHV3-29-201ENST00000604817 ACBD3Q9H3P7 528 aa5.53□□□□□ -1.52
IGHV3-29-201ENST00000604817 RNF19AQ9NV58 838 aa5.53□□□□□ -1.52
IGHV3-29-201ENST00000604817 FAM13BQ9NYF5 915 aa5.53□□□□□ -1.52
IGHV3-29-201ENST00000604817 USP21Q9UK80 565 aa5.53□□□□□ -1.52
IGHV3-29-201ENST00000604817 HCN4Q9Y3Q4 1203 aa5.53□□□□□ -1.52
IGHV3-29-201ENST00000604817 TNFRSF10BO14763 440 aa5.52□□□□□ -1.53
IGHV3-29-201ENST00000604817 HYAL3O43820 417 aaPredicted RBP5.52□□□□□ -1.53
IGHV3-29-201ENST00000604817 RPLP1P05386 114 aaKnown RBP5.52□□□□□ -1.53
IGHV3-29-201ENST00000604817 TNNI2P48788 182 aa5.52□□□□□ -1.53
IGHV3-29-201ENST00000604817 TBC1D8BQ0IIM8 1120 aa5.52□□□□□ -1.53
IGHV3-29-201ENST00000604817 PDE3BQ13370 1112 aa5.52□□□□□ -1.53
IGHV3-29-201ENST00000604817 DSC3Q14574 896 aa5.52□□□□□ -1.53
IGHV3-29-201ENST00000604817 TMC4Q7Z404 712 aa5.52□□□□□ -1.53
IGHV3-29-201ENST00000604817 NLGN1Q8N2Q7 840 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms