RNA–Protein interactions for RNA: ENST00000589167.1

NEDD4L-226, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-226ENST00000589167 NEUROD2Q15784 382 aa9.12□□□□□ -0.95
NEDD4L-226ENST00000589167 KRT24Q2M2I5 525 aa9.12□□□□□ -0.95
NEDD4L-226ENST00000589167 PCDHB3Q9Y5E6 796 aa9.12□□□□□ -0.95
NEDD4L-226ENST00000589167 NUP98P52948 1817 aa9.12□□□□□ -0.95
NEDD4L-226ENST00000589167 COL4A5P29400 1685 aa9.11□□□□□ -0.95
NEDD4L-226ENST00000589167 HIC1Q14526 733 aa9.11□□□□□ -0.95
NEDD4L-226ENST00000589167 WDR43Q15061 677 aaKnown RBP eCLIP9.11□□□□□ -0.95
NEDD4L-226ENST00000589167 CRY2Q49AN0 593 aa9.11□□□□□ -0.95
NEDD4L-226ENST00000589167 TPRNQ4KMQ1 711 aa9.11□□□□□ -0.95
NEDD4L-226ENST00000589167 SUSD4Q5VX71 490 aa9.11□□□□□ -0.95
NEDD4L-226ENST00000589167 GIGYF2Q6Y7W6 1299 aaKnown RBP9.11□□□□□ -0.95
NEDD4L-226ENST00000589167 LRP10Q7Z4F1 713 aa9.11□□□□□ -0.95
NEDD4L-226ENST00000589167 RPGRQ92834 1020 aaKnown RBP9.11□□□□□ -0.95
NEDD4L-226ENST00000589167 TCERG1O14776 1098 aaKnown RBP9.1□□□□□ -0.95
NEDD4L-226ENST00000589167 Q6ZNB5 142 aa9.1□□□□□ -0.95
NEDD4L-226ENST00000589167 ZNF34Q8IZ26 560 aa9.1□□□□□ -0.95
NEDD4L-226ENST00000589167 PRR14Q9BWN1 585 aa9.1□□□□□ -0.95
NEDD4L-226ENST00000589167 LAS1LQ9Y4W2 734 aaKnown RBP9.1□□□□□ -0.95
NEDD4L-226ENST00000589167 RNF123Q5XPI4 1314 aa9.09□□□□□ -0.95
NEDD4L-226ENST00000589167 PPEF1O14829 653 aaPredicted RBP9.09□□□□□ -0.95
NEDD4L-226ENST00000589167 ALDH1B1P30837 517 aa9.09□□□□□ -0.95
NEDD4L-226ENST00000589167 IARSP41252 1262 aaKnown RBP9.09□□□□□ -0.95
NEDD4L-226ENST00000589167 AIMP1Q12904 312 aaKnown RBP9.09□□□□□ -0.95
NEDD4L-226ENST00000589167 BLOC1S3Q6QNY0 202 aa9.09□□□□□ -0.95
NEDD4L-226ENST00000589167 RTKN2Q8IZC4 609 aa9.09□□□□□ -0.95
NEDD4L-226ENST00000589167 SYNE4Q8N205 404 aa9.09□□□□□ -0.95
NEDD4L-226ENST00000589167 XAGE3Q8WTP9 111 aa9.09□□□□□ -0.95
NEDD4L-226ENST00000589167 ZNF428Q96B54 188 aa9.09□□□□□ -0.95
NEDD4L-226ENST00000589167 ANKRD36CQ5JPF3 1778 aa9.09□□□□□ -0.95
NEDD4L-226ENST00000589167 IQCA1LA6NCM1 817 aa9.08□□□□□ -0.96
NEDD4L-226ENST00000589167 FECHP22830 423 aa9.08□□□□□ -0.96
NEDD4L-226ENST00000589167 PARP10Q53GL7 1025 aa9.08□□□□□ -0.96
NEDD4L-226ENST00000589167 EAPPQ56P03 285 aaPredicted RBP9.08□□□□□ -0.96
NEDD4L-226ENST00000589167 JMYQ8N9B5 988 aa9.08□□□□□ -0.96
NEDD4L-226ENST00000589167 PXYLP1Q8TE99 480 aa9.08□□□□□ -0.96
NEDD4L-226ENST00000589167 RUNDC1Q96C34 613 aa9.08□□□□□ -0.96
NEDD4L-226ENST00000589167 TAF1DQ9H5J8 278 aaPredicted RBP9.08□□□□□ -0.96
NEDD4L-226ENST00000589167 BABAM1Q9NWV8 329 aa9.08□□□□□ -0.96
NEDD4L-226ENST00000589167 CHPF2Q9P2E5 772 aa9.08□□□□□ -0.96
NEDD4L-226ENST00000589167 ABCC4O15439 1325 aa9.07□□□□□ -0.96
NEDD4L-226ENST00000589167 GFRA3O60609 400 aa9.07□□□□□ -0.96
NEDD4L-226ENST00000589167 ZMYND10O75800 440 aa9.07□□□□□ -0.96
NEDD4L-226ENST00000589167 OATP04181 439 aa9.07□□□□□ -0.96
NEDD4L-226ENST00000589167 HOXA10P31260 410 aaPredicted RBP9.07□□□□□ -0.96
NEDD4L-226ENST00000589167 HDGFL1Q5TGJ6 251 aa9.07□□□□□ -0.96
NEDD4L-226ENST00000589167 COPS6Q7L5N1 327 aa9.07□□□□□ -0.96
NEDD4L-226ENST00000589167 PPP1R42Q7Z4L9 355 aa9.07□□□□□ -0.96
NEDD4L-226ENST00000589167 LDHDQ86WU2 507 aa9.07□□□□□ -0.96
NEDD4L-226ENST00000589167 RBM17Q96I25 401 aaKnown RBP9.07□□□□□ -0.96
NEDD4L-226ENST00000589167 PSMD1Q99460 953 aa9.07□□□□□ -0.96
NEDD4L-226ENST00000589167 UTP14AQ9BVJ6 771 aaKnown RBP9.07□□□□□ -0.96
NEDD4L-226ENST00000589167 PRKRIP1Q9H875 184 aaPredicted RBP9.07□□□□□ -0.96
NEDD4L-226ENST00000589167 ADAMTS8Q9UP79 889 aa9.07□□□□□ -0.96
NEDD4L-226ENST00000589167 SCN4AP35499 1836 aa9.06□□□□□ -0.96
NEDD4L-226ENST00000589167 FZD9O00144 591 aa9.06□□□□□ -0.96
NEDD4L-226ENST00000589167 CHL1O00533 1208 aa9.06□□□□□ -0.96
NEDD4L-226ENST00000589167 CFHP08603 1231 aa9.06□□□□□ -0.96
NEDD4L-226ENST00000589167 SLC10A3P09131 477 aa9.06□□□□□ -0.96
NEDD4L-226ENST00000589167 HSPA1AP0DMV8 641 aaKnown RBP9.06□□□□□ -0.96
NEDD4L-226ENST00000589167 HSPA1BP0DMV9 641 aaKnown RBP9.06□□□□□ -0.96
NEDD4L-226ENST00000589167 HCLS1P14317 486 aaPredicted RBP9.06□□□□□ -0.96
NEDD4L-226ENST00000589167 GGCXP38435 758 aa9.06□□□□□ -0.96
NEDD4L-226ENST00000589167 KMT5BQ4FZB7 885 aa9.06□□□□□ -0.96
NEDD4L-226ENST00000589167 NLRP10Q86W26 655 aa9.06□□□□□ -0.96
NEDD4L-226ENST00000589167 LARGE2Q8N3Y3 721 aa9.06□□□□□ -0.96
NEDD4L-226ENST00000589167 JDP2Q8WYK2 163 aa9.06□□□□□ -0.96
NEDD4L-226ENST00000589167 NLRP3Q96P20 1036 aa9.06□□□□□ -0.96
NEDD4L-226ENST00000589167 CRAMP1Q96RY5 1269 aa9.06□□□□□ -0.96
NEDD4L-226ENST00000589167 DDX21Q9NR30 783 aaKnown RBP eCLIP9.06□□□□□ -0.96
NEDD4L-226ENST00000589167 MKRN1Q9UHC7 482 aaKnown RBP9.06□□□□□ -0.96
NEDD4L-226ENST00000589167 HACL1Q9UJ83 578 aa9.06□□□□□ -0.96
NEDD4L-226ENST00000589167 GJA3Q9Y6H8 435 aa9.06□□□□□ -0.96
NEDD4L-226ENST00000589167 LAMB2P55268 1798 aa9.06□□□□□ -0.96
NEDD4L-226ENST00000589167 ADAMTSL1Q8N6G6 1762 aa9.06□□□□□ -0.96
NEDD4L-226ENST00000589167 LTBP1Q14766 1721 aa9.05□□□□□ -0.96
NEDD4L-226ENST00000589167 PPIP5K2O43314 1243 aa9.05□□□□□ -0.96
NEDD4L-226ENST00000589167 ACTN4O43707 911 aaKnown RBP9.05□□□□□ -0.96
NEDD4L-226ENST00000589167 PRKCSHP14314 528 aaPredicted RBP9.05□□□□□ -0.96
NEDD4L-226ENST00000589167 EPHX2P34913 555 aa9.05□□□□□ -0.96
NEDD4L-226ENST00000589167 AOC3Q16853 763 aa9.05□□□□□ -0.96
NEDD4L-226ENST00000589167 HSP90AB3PQ58FF7 597 aa9.05□□□□□ -0.96
NEDD4L-226ENST00000589167 CC2D2BQ6DHV5 1058 aa9.05□□□□□ -0.96
NEDD4L-226ENST00000589167 TRMT112Q9UI30 125 aaKnown RBP9.05□□□□□ -0.96
NEDD4L-226ENST00000589167 V9GY48 417 aaPredicted RBP9.05□□□□□ -0.96
NEDD4L-226ENST00000589167 SH3TC1Q8TE82 1336 aa9.05□□□□□ -0.96
NEDD4L-226ENST00000589167 PASKQ96RG2 1323 aa9.05□□□□□ -0.96
NEDD4L-226ENST00000589167 DUOX1Q9NRD9 1551 aa9.04□□□□□ -0.96
NEDD4L-226ENST00000589167 TLL1O43897 1013 aa9.04□□□□□ -0.96
NEDD4L-226ENST00000589167 EIF6P56537 245 aaKnown RBP9.04□□□□□ -0.96
NEDD4L-226ENST00000589167 TCIRG1Q13488 830 aa9.04□□□□□ -0.96
NEDD4L-226ENST00000589167 LAPTM4AQ15012 233 aa9.04□□□□□ -0.96
NEDD4L-226ENST00000589167 COL13A1Q5TAT6 717 aaPredicted RBP9.04□□□□□ -0.96
NEDD4L-226ENST00000589167 MAP1SQ66K74 1059 aaPredicted RBP9.04□□□□□ -0.96
NEDD4L-226ENST00000589167 METTL3Q86U44 580 aaKnown RBP9.04□□□□□ -0.96
NEDD4L-226ENST00000589167 NIM1KQ8IY84 436 aa9.04□□□□□ -0.96
NEDD4L-226ENST00000589167 GPC2Q8N158 579 aa9.04□□□□□ -0.96
NEDD4L-226ENST00000589167 MBIPQ9NS73 344 aa9.04□□□□□ -0.96
NEDD4L-226ENST00000589167 ATP6V0A2Q9Y487 856 aa9.04□□□□□ -0.96
NEDD4L-226ENST00000589167 COL4A1P02462 1669 aa9.04□□□□□ -0.96
NEDD4L-226ENST00000589167 DDX60Q8IY21 1712 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms