RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 SH3GLB2Q9NR46 395 aa5.72□□□□□ -1.49
SMG1-207ENST00000563235 FBXO2Q9UK22 296 aaPredicted RBP5.72□□□□□ -1.49
SMG1-207ENST00000563235 TRIM35Q9UPQ4 493 aa5.72□□□□□ -1.49
SMG1-207ENST00000563235 LGR5O75473 907 aa5.71□□□□□ -1.49
SMG1-207ENST00000563235 NCAM1P13591 858 aa5.71□□□□□ -1.49
SMG1-207ENST00000563235 PPM1FP49593 454 aaPredicted RBP5.71□□□□□ -1.49
SMG1-207ENST00000563235 DAB2P98082 770 aa5.71□□□□□ -1.49
SMG1-207ENST00000563235 DDB1Q16531 1140 aa5.71□□□□□ -1.49
SMG1-207ENST00000563235 HYIQ5T013 277 aa5.71□□□□□ -1.49
SMG1-207ENST00000563235 EP400NLQ6ZTU2 488 aa5.71□□□□□ -1.49
SMG1-207ENST00000563235 FAM200AQ8TCP9 573 aa5.71□□□□□ -1.49
SMG1-207ENST00000563235 ZFPM2Q8WW38 1151 aa5.71□□□□□ -1.49
SMG1-207ENST00000563235 IPCEF1Q8WWN9 437 aaPredicted RBP5.71□□□□□ -1.49
SMG1-207ENST00000563235 TIFAQ96CG3 184 aa5.71□□□□□ -1.49
SMG1-207ENST00000563235 DEPDC7Q96QD5 511 aa5.71□□□□□ -1.49
SMG1-207ENST00000563235 CABP2Q9NPB3 220 aa5.71□□□□□ -1.49
SMG1-207ENST00000563235 NOB1Q9ULX3 412 aaKnown RBP5.71□□□□□ -1.49
SMG1-207ENST00000563235 COLQQ9Y215 455 aaPredicted RBP5.71□□□□□ -1.49
SMG1-207ENST00000563235 MAGI1Q96QZ7 1491 aaPredicted RBP5.71□□□□□ -1.5
SMG1-207ENST00000563235 VAMP4O75379 141 aa5.71□□□□□ -1.5
SMG1-207ENST00000563235 VARSP26640 1264 aaKnown RBP5.71□□□□□ -1.5
SMG1-207ENST00000563235 HALP42357 657 aa5.71□□□□□ -1.5
SMG1-207ENST00000563235 MAPK8P45983 427 aa5.71□□□□□ -1.5
SMG1-207ENST00000563235 ZNF449Q6P9G9 518 aa5.71□□□□□ -1.5
SMG1-207ENST00000563235 GTF3C2Q8WUA4 911 aaPredicted RBP5.71□□□□□ -1.5
SMG1-207ENST00000563235 RMI1Q9H9A7 625 aa5.71□□□□□ -1.5
SMG1-207ENST00000563235 CDHR5Q9HBB8 845 aa5.71□□□□□ -1.5
SMG1-207ENST00000563235 AKAP10O43572 662 aa5.71□□□□□ -1.5
SMG1-207ENST00000563235 CTDSPL2Q05D32 466 aa5.71□□□□□ -1.5
SMG1-207ENST00000563235 FMR1Q06787 632 aaKnown RBP eCLIP5.71□□□□□ -1.5
SMG1-207ENST00000563235 PPP4R3AQ6IN85 833 aa5.71□□□□□ -1.5
SMG1-207ENST00000563235 IQCEQ6IPM2 695 aa5.71□□□□□ -1.5
SMG1-207ENST00000563235 DDX42Q86XP3 938 aaKnown RBP eCLIP5.71□□□□□ -1.5
SMG1-207ENST00000563235 APPBP2Q92624 585 aa5.71□□□□□ -1.5
SMG1-207ENST00000563235 NUDT16Q96DE0 195 aaKnown RBP5.71□□□□□ -1.5
SMG1-207ENST00000563235 EIF2AK1Q9BQI3 630 aaKnown RBP5.71□□□□□ -1.5
SMG1-207ENST00000563235 GTF2A1LQ9UNN4 478 aa5.71□□□□□ -1.5
SMG1-207ENST00000563235 BAIAP3O94812 1187 aa5.7□□□□□ -1.5
SMG1-207ENST00000563235 F2P00734 622 aa5.7□□□□□ -1.5
SMG1-207ENST00000563235 CTSHP09668 335 aa5.7□□□□□ -1.5
SMG1-207ENST00000563235 BPIFB3P59826 476 aa5.7□□□□□ -1.5
SMG1-207ENST00000563235 SQSTM1Q13501 440 aa5.7□□□□□ -1.5
SMG1-207ENST00000563235 DSG2Q14126 1118 aa5.7□□□□□ -1.5
SMG1-207ENST00000563235 MORC3Q14149 939 aa5.7□□□□□ -1.5
SMG1-207ENST00000563235 OCLNQ16625 522 aa5.7□□□□□ -1.5
SMG1-207ENST00000563235 ANKRD45Q5TZF3 282 aa5.7□□□□□ -1.5
SMG1-207ENST00000563235 RSBN1LQ6PCB5 846 aaPredicted RBP5.7□□□□□ -1.5
SMG1-207ENST00000563235 MAATS1Q7Z4T9 603 aa5.7□□□□□ -1.5
SMG1-207ENST00000563235 OR8H2Q8N162 312 aa5.7□□□□□ -1.5
SMG1-207ENST00000563235 PRIMPOLQ96LW4 560 aa5.7□□□□□ -1.5
SMG1-207ENST00000563235 TBK1Q9UHD2 729 aa5.7□□□□□ -1.5
SMG1-207ENST00000563235 BOLA2-SMG1P6H3BVE0 249 aa5.7□□□□□ -1.5
SMG1-207ENST00000563235 CHL1O00533 1208 aa5.7□□□□□ -1.5
SMG1-207ENST00000563235 IFIT2P09913 472 aaKnown RBP5.7□□□□□ -1.5
SMG1-207ENST00000563235 GJA8P48165 433 aa5.7□□□□□ -1.5
SMG1-207ENST00000563235 IFNL1Q8IU54 200 aa5.7□□□□□ -1.5
SMG1-207ENST00000563235 SMAP1Q8IYB5 467 aaPredicted RBP5.7□□□□□ -1.5
SMG1-207ENST00000563235 UHMK1Q8TAS1 419 aaKnown RBP5.7□□□□□ -1.5
SMG1-207ENST00000563235 PAIP2Q9BPZ3 127 aaKnown RBP5.7□□□□□ -1.5
SMG1-207ENST00000563235 NPDC1Q9NQX5 325 aaPredicted RBP5.7□□□□□ -1.5
SMG1-207ENST00000563235 LEMD3Q9Y2U8 911 aa5.7□□□□□ -1.5
SMG1-207ENST00000563235 TRIM6-TRIM34B2RNG4 842 aa5.69□□□□□ -1.5
SMG1-207ENST00000563235 TREHO43280 583 aa5.69□□□□□ -1.5
SMG1-207ENST00000563235 KCNQ2O43526 872 aa5.69□□□□□ -1.5
SMG1-207ENST00000563235 FMNL1O95466 1100 aaPredicted RBP5.69□□□□□ -1.5
SMG1-207ENST00000563235 PAX7P23759 505 aa5.69□□□□□ -1.5
SMG1-207ENST00000563235 WDR45BQ5MNZ6 344 aa5.69□□□□□ -1.5
SMG1-207ENST00000563235 RASGRP2Q7LDG7 609 aa5.69□□□□□ -1.5
SMG1-207ENST00000563235 LRRN4Q8WUT4 740 aa5.69□□□□□ -1.5
SMG1-207ENST00000563235 DNAJC7Q99615 494 aa5.69□□□□□ -1.5
SMG1-207ENST00000563235 USP17L5A8MUK1 530 aa5.69□□□□□ -1.5
SMG1-207ENST00000563235 KATNA1O75449 491 aa5.69□□□□□ -1.5
SMG1-207ENST00000563235 PGRP06401 933 aa5.69□□□□□ -1.5
SMG1-207ENST00000563235 TPM2P07951 284 aa5.69□□□□□ -1.5
SMG1-207ENST00000563235 HSP90AB1P08238 724 aaKnown RBP5.69□□□□□ -1.5
SMG1-207ENST00000563235 ETFBP38117 255 aa5.69□□□□□ -1.5
SMG1-207ENST00000563235 UBA7P41226 1012 aa5.69□□□□□ -1.5
SMG1-207ENST00000563235 MECOMQ03112 1051 aa5.69□□□□□ -1.5
SMG1-207ENST00000563235 C21orf62-AS1Q17RA5 79 aa5.69□□□□□ -1.5
SMG1-207ENST00000563235 ARSHQ5FYA8 562 aa5.69□□□□□ -1.5
SMG1-207ENST00000563235 MORC1Q86VD1 984 aa5.69□□□□□ -1.5
SMG1-207ENST00000563235 EMID1Q96A84 441 aaPredicted RBP5.69□□□□□ -1.5
SMG1-207ENST00000563235 RTFDC1Q9BY42 306 aaPredicted RBP5.69□□□□□ -1.5
SMG1-207ENST00000563235 ABCG4Q9H172 646 aa5.69□□□□□ -1.5
SMG1-207ENST00000563235 ZSWIM6Q9HCJ5 1215 aa5.69□□□□□ -1.5
SMG1-207ENST00000563235 WASHC2CQ9Y4E1 1318 aa5.69□□□□□ -1.5
SMG1-207ENST00000563235 TOPBP1Q92547 1522 aa5.69□□□□□ -1.5
SMG1-207ENST00000563235 SPTLC1O15269 473 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 PRPF40AO75400 957 aaKnown RBP5.68□□□□□ -1.5
SMG1-207ENST00000563235 DNAJB2P25686 324 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 CNGA1P29973 690 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 SNX16P57768 344 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 MCM10Q7L590 875 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 ARHGEF25Q86VW2 580 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 SAMD14Q8IZD0 417 aaPredicted RBP5.68□□□□□ -1.5
SMG1-207ENST00000563235 ZNF654Q8IZM8 581 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 UBR7Q8N806 425 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 C1orf216Q8TAB5 229 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 FAM174AQ8TBP5 190 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 SMARCC1Q92922 1105 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms