RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 SRPK2P78362 688 aaKnown RBP6.66□□□□□ -1.34
CAPN3-211ENST00000562199 HMGN5P82970 282 aaKnown RBP6.66□□□□□ -1.34
CAPN3-211ENST00000562199 UBE4AQ14139 1066 aa6.66□□□□□ -1.34
CAPN3-211ENST00000562199 GAS6Q14393 721 aa6.66□□□□□ -1.34
CAPN3-211ENST00000562199 CCDC92Q53HC0 331 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-211ENST00000562199 HSP90B2PQ58FF3 399 aa6.66□□□□□ -1.34
CAPN3-211ENST00000562199 ZC3H12AQ5D1E8 599 aaKnown RBP6.66□□□□□ -1.34
CAPN3-211ENST00000562199 L1TD1Q5T7N2 865 aaKnown RBP6.66□□□□□ -1.34
CAPN3-211ENST00000562199 CC2D1AQ6P1N0 951 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-211ENST00000562199 CYP2U1Q7Z449 544 aa6.66□□□□□ -1.34
CAPN3-211ENST00000562199 HSCBQ8IWL3 235 aa6.66□□□□□ -1.34
CAPN3-211ENST00000562199 STAG1Q8WVM7 1258 aa6.66□□□□□ -1.34
CAPN3-211ENST00000562199 DHX38Q92620 1227 aaKnown RBP6.66□□□□□ -1.34
CAPN3-211ENST00000562199 ZNF837Q96EG3 531 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-211ENST00000562199 CFAP53Q96M91 514 aa6.66□□□□□ -1.34
CAPN3-211ENST00000562199 ZHX3Q9H4I2 956 aa6.66□□□□□ -1.34
CAPN3-211ENST00000562199 OSBPL3Q9H4L5 887 aa6.66□□□□□ -1.34
CAPN3-211ENST00000562199 PCDH12Q9NPG4 1184 aa6.66□□□□□ -1.34
CAPN3-211ENST00000562199 CCDC7Q96M83 1385 aa6.66□□□□□ -1.34
CAPN3-211ENST00000562199 TEX14Q8IWB6 1497 aa6.66□□□□□ -1.34
CAPN3-211ENST00000562199 PES1O00541 588 aaKnown RBP6.65□□□□□ -1.34
CAPN3-211ENST00000562199 GPR37L1O60883 481 aa6.65□□□□□ -1.34
CAPN3-211ENST00000562199 ARHGEF15O94989 841 aa6.65□□□□□ -1.34
CAPN3-211ENST00000562199 KIF20AO95235 890 aa6.65□□□□□ -1.34
CAPN3-211ENST00000562199 HSPA5P11021 654 aaKnown RBP6.65□□□□□ -1.34
CAPN3-211ENST00000562199 NEFHP12036 1026 aa6.65□□□□□ -1.34
CAPN3-211ENST00000562199 GPC1P35052 558 aa6.65□□□□□ -1.34
CAPN3-211ENST00000562199 IRS1P35568 1242 aa6.65□□□□□ -1.34
CAPN3-211ENST00000562199 BMS1Q14692 1282 aaKnown RBP6.65□□□□□ -1.34
CAPN3-211ENST00000562199 RNF187Q5TA31 235 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-211ENST00000562199 TRIM22Q8IYM9 498 aa6.65□□□□□ -1.34
CAPN3-211ENST00000562199 GTPBP3Q969Y2 492 aaKnown RBP6.65□□□□□ -1.34
CAPN3-211ENST00000562199 CCDC47Q96A33 483 aaKnown RBP6.65□□□□□ -1.34
CAPN3-211ENST00000562199 RUNDC1Q96C34 613 aa6.65□□□□□ -1.34
CAPN3-211ENST00000562199 CCDC94Q9BW85 323 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-211ENST00000562199 GRIP2Q9C0E4 1043 aa6.65□□□□□ -1.34
CAPN3-211ENST00000562199 ODF2LQ9ULJ1 636 aa6.65□□□□□ -1.34
CAPN3-211ENST00000562199 TBC1D2BQ9UPU7 963 aa6.65□□□□□ -1.34
CAPN3-211ENST00000562199 DIS3Q9Y2L1 958 aaKnown RBP6.65□□□□□ -1.34
CAPN3-211ENST00000562199 SMG6Q86US8 1419 aaKnown RBP6.65□□□□□ -1.35
CAPN3-211ENST00000562199 MAGI3Q5TCQ9 1506 aa6.65□□□□□ -1.35
CAPN3-211ENST00000562199 KDM6BO15054 1643 aa6.65□□□□□ -1.35
CAPN3-211ENST00000562199 IPO5O00410 1097 aaKnown RBP6.64□□□□□ -1.35
CAPN3-211ENST00000562199 MPHOSPH10O00566 681 aaKnown RBP6.64□□□□□ -1.35
CAPN3-211ENST00000562199 EIF5P55010 431 aaKnown RBP6.64□□□□□ -1.35
CAPN3-211ENST00000562199 SRSF11Q05519 484 aaKnown RBP6.64□□□□□ -1.35
CAPN3-211ENST00000562199 IFT88Q13099 833 aa6.64□□□□□ -1.35
CAPN3-211ENST00000562199 CLN3Q13286 438 aa6.64□□□□□ -1.35
CAPN3-211ENST00000562199 SAFB2Q14151 953 aaKnown RBP eCLIP6.64□□□□□ -1.35
CAPN3-211ENST00000562199 MAP9Q49MG5 647 aa6.64□□□□□ -1.35
CAPN3-211ENST00000562199 FOXR1Q6PIV2 292 aa6.64□□□□□ -1.35
CAPN3-211ENST00000562199 KRT77Q7Z794 578 aa6.64□□□□□ -1.35
CAPN3-211ENST00000562199 NBPF15Q8N660 670 aa6.64□□□□□ -1.35
CAPN3-211ENST00000562199 DDX56Q9NY93 547 aaKnown RBP6.64□□□□□ -1.35
CAPN3-211ENST00000562199 MKRN1Q9UHC7 482 aaKnown RBP6.64□□□□□ -1.35
CAPN3-211ENST00000562199 CEP83Q9Y592 693 aa6.64□□□□□ -1.35
CAPN3-211ENST00000562199 MIA2Q96PC5 1412 aa6.64□□□□□ -1.35
CAPN3-211ENST00000562199 RAD54L2Q9Y4B4 1467 aa6.64□□□□□ -1.35
CAPN3-211ENST00000562199 TMEM88BA6NKF7 163 aa6.63□□□□□ -1.35
CAPN3-211ENST00000562199 RNF225M0QZC1 329 aaPredicted RBP6.63□□□□□ -1.35
CAPN3-211ENST00000562199 LDHAP00338 332 aaKnown RBP6.63□□□□□ -1.35
CAPN3-211ENST00000562199 CELA2BP08218 269 aaPredicted RBP6.63□□□□□ -1.35
CAPN3-211ENST00000562199 VIL1P09327 827 aaKnown RBP6.63□□□□□ -1.35
CAPN3-211ENST00000562199 KCNA2P16389 499 aa6.63□□□□□ -1.35
CAPN3-211ENST00000562199 RFX1P22670 979 aa6.63□□□□□ -1.35
CAPN3-211ENST00000562199 PHKA2P46019 1235 aa6.63□□□□□ -1.35
CAPN3-211ENST00000562199 NESP48681 1621 aa6.63□□□□□ -1.35
CAPN3-211ENST00000562199 EIF4G2P78344 907 aaKnown RBP eCLIP6.63□□□□□ -1.35
CAPN3-211ENST00000562199 MAP3K10Q02779 954 aa6.63□□□□□ -1.35
CAPN3-211ENST00000562199 TSGA10IPQ3SY00 556 aa6.63□□□□□ -1.35
CAPN3-211ENST00000562199 RPRD2Q5VT52 1461 aaKnown RBP6.63□□□□□ -1.35
CAPN3-211ENST00000562199 KLHL10Q6JEL2 608 aa6.63□□□□□ -1.35
CAPN3-211ENST00000562199 CATIPQ7Z7H3 387 aa6.63□□□□□ -1.35
CAPN3-211ENST00000562199 NGDNQ8NEJ9 315 aaKnown RBP6.63□□□□□ -1.35
CAPN3-211ENST00000562199 PIK3R5Q8WYR1 880 aa6.63□□□□□ -1.35
CAPN3-211ENST00000562199 GLMNQ92990 594 aa6.63□□□□□ -1.35
CAPN3-211ENST00000562199 C22orf23Q9BZE7 217 aa6.63□□□□□ -1.35
CAPN3-211ENST00000562199 TIMMDC1Q9NPL8 285 aa6.63□□□□□ -1.35
CAPN3-211ENST00000562199 DYRK1BQ9Y463 629 aa6.63□□□□□ -1.35
CAPN3-211ENST00000562199 KIF14Q15058 1648 aa6.62□□□□□ -1.35
CAPN3-211ENST00000562199 LAMC3Q9Y6N6 1575 aa6.62□□□□□ -1.35
CAPN3-211ENST00000562199 MBD5Q9P267 1494 aa6.62□□□□□ -1.35
CAPN3-211ENST00000562199 GOLGA6L3A6NEY3 463 aa6.62□□□□□ -1.35
CAPN3-211ENST00000562199 KIF1CO43896 1103 aaKnown RBP6.62□□□□□ -1.35
CAPN3-211ENST00000562199 MTA2O94776 668 aa6.62□□□□□ -1.35
CAPN3-211ENST00000562199 HSP90AB1P08238 724 aaKnown RBP6.62□□□□□ -1.35
CAPN3-211ENST00000562199 PAX7P23759 505 aa6.62□□□□□ -1.35
CAPN3-211ENST00000562199 NAP1L1P55209 391 aaKnown RBP6.62□□□□□ -1.35
CAPN3-211ENST00000562199 KIAA2012Q0VF49 1180 aa6.62□□□□□ -1.35
CAPN3-211ENST00000562199 CCDC70Q6NSX1 233 aa6.62□□□□□ -1.35
CAPN3-211ENST00000562199 LMNTD2Q8IXW0 634 aa6.62□□□□□ -1.35
CAPN3-211ENST00000562199 CNKSR1Q969H4 720 aa6.62□□□□□ -1.35
CAPN3-211ENST00000562199 SLC39A13Q96H72 371 aa6.62□□□□□ -1.35
CAPN3-211ENST00000562199 PRKRIP1Q9H875 184 aaPredicted RBP6.62□□□□□ -1.35
CAPN3-211ENST00000562199 IFT57Q9NWB7 429 aa6.62□□□□□ -1.35
CAPN3-211ENST00000562199 DNMT1P26358 1616 aaKnown RBP6.61□□□□□ -1.35
CAPN3-211ENST00000562199 WDR62O43379 1518 aa6.61□□□□□ -1.35
CAPN3-211ENST00000562199 SPATA31E1Q6ZUB1 1445 aa6.61□□□□□ -1.35
CAPN3-211ENST00000562199 ROCK1Q13464 1354 aa6.61□□□□□ -1.35
CAPN3-211ENST00000562199 RNF123Q5XPI4 1314 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms