RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 AEBP2Q6ZN18 517 aaPredicted RBP20.08■□□□□ 0.81
CAPN3-211ENST00000562199 CHIC1Q5VXU3 224 aa19.11■□□□□ 0.65
CAPN3-211ENST00000562199 SENP3Q9H4L4 574 aaPredicted RBP17.06■□□□□ 0.32
CAPN3-211ENST00000562199 PHF23Q9BUL5 403 aaPredicted RBP16.91■□□□□ 0.3
CAPN3-211ENST00000562199 FOXD1Q16676 465 aa15.94■□□□□ 0.14
CAPN3-211ENST00000562199 PLPPR3Q6T4P5 718 aa15.31■□□□□ 0.04
CAPN3-211ENST00000562199 PPP6R1Q9UPN7 881 aa15.01□□□□□ -0.01
CAPN3-211ENST00000562199 ADRA2BP18089 450 aa14.98□□□□□ -0.01
CAPN3-211ENST00000562199 PIAS4Q8N2W9 510 aaPredicted RBP14.93□□□□□ -0.02
CAPN3-211ENST00000562199 MSH5O43196 834 aa14.82□□□□□ -0.04
CAPN3-211ENST00000562199 POTEDQ86YR6 584 aa14.37□□□□□ -0.11
CAPN3-211ENST00000562199 MAPK8IP2Q13387 824 aaPredicted RBP13.75□□□□□ -0.21
CAPN3-211ENST00000562199 SCAF1Q9H7N4 1312 aaKnown RBP13.64□□□□□ -0.23
CAPN3-211ENST00000562199 DMRT2Q9Y5R5 561 aa13.55□□□□□ -0.24
CAPN3-211ENST00000562199 PPP4R3CPQ6ZMV5 832 aa13.47□□□□□ -0.25
CAPN3-211ENST00000562199 CNKSR2Q8WXI2 1034 aa13.16□□□□□ -0.3
CAPN3-211ENST00000562199 DCAF8L1A6NGE4 600 aa13.11□□□□□ -0.31
CAPN3-211ENST00000562199 HOXD11P31277 338 aaPredicted RBP13.06□□□□□ -0.32
CAPN3-211ENST00000562199 RNF216Q9NWF9 866 aaPredicted RBP13□□□□□ -0.33
CAPN3-211ENST00000562199 NCBP3Q53F19 620 aaKnown RBP12.95□□□□□ -0.34
CAPN3-211ENST00000562199 NPM3O75607 178 aaKnown RBP12.79□□□□□ -0.36
CAPN3-211ENST00000562199 CACNB1Q02641 598 aaPredicted RBP12.75□□□□□ -0.37
CAPN3-211ENST00000562199 RNF39Q9H2S5 420 aa12.67□□□□□ -0.38
CAPN3-211ENST00000562199 KCNA4P22459 653 aa12.65□□□□□ -0.38
CAPN3-211ENST00000562199 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.54□□□□□ -0.4
CAPN3-211ENST00000562199 DNAJC5BQ9UF47 199 aa12.51□□□□□ -0.41
CAPN3-211ENST00000562199 C1QBPQ07021 282 aaKnown RBP12.48□□□□□ -0.41
CAPN3-211ENST00000562199 U3KPZ7 1027 aaPredicted RBP12.24□□□□□ -0.45
CAPN3-211ENST00000562199 SLC4A2P04920 1241 aa12.19□□□□□ -0.46
CAPN3-211ENST00000562199 SPINK5Q9NQ38 1064 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-211ENST00000562199 CAPN15O75808 1086 aa12.07□□□□□ -0.48
CAPN3-211ENST00000562199 SLC4A1APQ9BWU0 796 aaKnown RBP11.95□□□□□ -0.5
CAPN3-211ENST00000562199 TRHP20396 242 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-211ENST00000562199 DSG3P32926 999 aa11.92□□□□□ -0.5
CAPN3-211ENST00000562199 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.88□□□□□ -0.51
CAPN3-211ENST00000562199 HNRNPUL2Q1KMD3 747 aaKnown RBP11.88□□□□□ -0.51
CAPN3-211ENST00000562199 APLP2Q06481 763 aa11.86□□□□□ -0.51
CAPN3-211ENST00000562199 SAMD1Q6SPF0 538 aaPredicted RBP11.83□□□□□ -0.52
CAPN3-211ENST00000562199 ABCB7O75027 752 aa11.82□□□□□ -0.52
CAPN3-211ENST00000562199 MYCNP04198 464 aaPredicted RBP11.79□□□□□ -0.52
CAPN3-211ENST00000562199 ZNF219Q9P2Y4 722 aaPredicted RBP11.79□□□□□ -0.52
CAPN3-211ENST00000562199 FOXD4L1Q9NU39 408 aa11.73□□□□□ -0.53
CAPN3-211ENST00000562199 ZBTB22O15209 634 aa11.62□□□□□ -0.55
CAPN3-211ENST00000562199 POLA2Q14181 598 aa11.59□□□□□ -0.55
CAPN3-211ENST00000562199 ATF5Q9Y2D1 282 aaPredicted RBP11.59□□□□□ -0.55
CAPN3-211ENST00000562199 RBM42Q9BTD8 480 aaKnown RBP11.33□□□□□ -0.6
CAPN3-211ENST00000562199 ATXN8OSP0DMR3 200 aa11.31□□□□□ -0.6
CAPN3-211ENST00000562199 POTEHQ6S545 545 aa11.28□□□□□ -0.6
CAPN3-211ENST00000562199 ZBTB12Q9Y330 459 aaPredicted RBP11.26□□□□□ -0.61
CAPN3-211ENST00000562199 OSCARQ8IYS5 282 aa11.2□□□□□ -0.62
CAPN3-211ENST00000562199 CSRNP3Q8WYN3 585 aa11.18□□□□□ -0.62
CAPN3-211ENST00000562199 EHMT2Q96KQ7 1210 aa11.14□□□□□ -0.63
CAPN3-211ENST00000562199 AKT1S1Q96B36 256 aa11.11□□□□□ -0.63
CAPN3-211ENST00000562199 CHRDL2Q6WN34 429 aa11.09□□□□□ -0.63
CAPN3-211ENST00000562199 FBLN2P98095 1184 aa11.08□□□□□ -0.64
CAPN3-211ENST00000562199 SLC24A1O60721 1099 aa11.05□□□□□ -0.64
CAPN3-211ENST00000562199 REM2Q8IYK8 340 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-211ENST00000562199 MKRN4PQ13434 485 aaPredicted RBP11.02□□□□□ -0.65
CAPN3-211ENST00000562199 SPDYE2BA6NHP3 402 aa10.94□□□□□ -0.66
CAPN3-211ENST00000562199 SPDYE6P0CI01 402 aa10.94□□□□□ -0.66
CAPN3-211ENST00000562199 SPDYE2Q495Y8 402 aa10.94□□□□□ -0.66
CAPN3-211ENST00000562199 PITPNM1O00562 1244 aa10.91□□□□□ -0.66
CAPN3-211ENST00000562199 ZNF692Q9BU19 519 aaPredicted RBP10.9□□□□□ -0.66
CAPN3-211ENST00000562199 PIP4P2Q8N4L2 257 aa10.85□□□□□ -0.67
CAPN3-211ENST00000562199 CLEC11AQ9Y240 323 aa10.82□□□□□ -0.68
CAPN3-211ENST00000562199 SSUH2Q9Y2M2 353 aa10.8□□□□□ -0.68
CAPN3-211ENST00000562199 FXR2P51116 673 aaKnown RBP eCLIP10.78□□□□□ -0.68
CAPN3-211ENST00000562199 SPDYE1Q8NFV5 336 aaPredicted RBP10.75□□□□□ -0.69
CAPN3-211ENST00000562199 PABPN1Q86U42 306 aaKnown RBP eCLIP10.74□□□□□ -0.69
CAPN3-211ENST00000562199 HAX1O00165 279 aa10.69□□□□□ -0.7
CAPN3-211ENST00000562199 PRKAR2AP13861 404 aaKnown RBP10.66□□□□□ -0.7
CAPN3-211ENST00000562199 PRR29P0C7W0 189 aa10.62□□□□□ -0.71
CAPN3-211ENST00000562199 SP7Q8TDD2 431 aaPredicted RBP10.61□□□□□ -0.71
CAPN3-211ENST00000562199 CHADLQ6NUI6 762 aa10.6□□□□□ -0.71
CAPN3-211ENST00000562199 SPDYE4A6NLX3 237 aa10.56□□□□□ -0.72
CAPN3-211ENST00000562199 EVX2Q03828 476 aa10.56□□□□□ -0.72
CAPN3-211ENST00000562199 C19orf67A6NJJ6 358 aa10.43□□□□□ -0.74
CAPN3-211ENST00000562199 STAG3Q9UJ98 1225 aa10.4□□□□□ -0.74
CAPN3-211ENST00000562199 FARP1Q9Y4F1 1045 aaPredicted RBP10.39□□□□□ -0.75
CAPN3-211ENST00000562199 CREBZFQ9NS37 354 aa10.34□□□□□ -0.75
CAPN3-211ENST00000562199 CD44P16070 742 aaKnown RBP10.32□□□□□ -0.76
CAPN3-211ENST00000562199 GABBR2O75899 941 aa10.29□□□□□ -0.76
CAPN3-211ENST00000562199 PROM2Q8N271 834 aa10.23□□□□□ -0.77
CAPN3-211ENST00000562199 ZRANB1Q9UGI0 708 aa10.21□□□□□ -0.77
CAPN3-211ENST00000562199 MYT1Q01538 1121 aa10.18□□□□□ -0.78
CAPN3-211ENST00000562199 DAXXQ9UER7 740 aaPredicted RBP10.18□□□□□ -0.78
CAPN3-211ENST00000562199 FKBP8Q14318 412 aa10.16□□□□□ -0.78
CAPN3-211ENST00000562199 TTBK1Q5TCY1 1321 aaPredicted RBP10.15□□□□□ -0.78
CAPN3-211ENST00000562199 NPM1P06748 294 aaKnown RBP eCLIP10.15□□□□□ -0.78
CAPN3-211ENST00000562199 MNX1P50219 401 aaPredicted RBP10.15□□□□□ -0.78
CAPN3-211ENST00000562199 PAK3O75914 559 aaPredicted RBP10.11□□□□□ -0.79
CAPN3-211ENST00000562199 MIER1Q8N108 512 aa10.11□□□□□ -0.79
CAPN3-211ENST00000562199 ZNF579Q8NAF0 562 aaKnown RBP10.11□□□□□ -0.79
CAPN3-211ENST00000562199 PHF12Q96QT6 1004 aa10.08□□□□□ -0.8
CAPN3-211ENST00000562199 POTEIP0CG38 1075 aa10.07□□□□□ -0.8
CAPN3-211ENST00000562199 CLCN6P51797 869 aa10.06□□□□□ -0.8
CAPN3-211ENST00000562199 DCBLD2Q96PD2 775 aa10.05□□□□□ -0.8
CAPN3-211ENST00000562199 TSPYL2Q9H2G4 693 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-211ENST00000562199 GALR2O43603 387 aaPredicted RBP10.04□□□□□ -0.8
CAPN3-211ENST00000562199 PLEKHG5O94827 1062 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms