RNA–Protein interactions for RNA: ENST00000552295.5

BEST3-211, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-211ENST00000552295 COL18A1P39060 1754 aa10.76□□□□□ -0.69
BEST3-211ENST00000552295 RGPD5Q99666 1765 aa10.76□□□□□ -0.69
BEST3-211ENST00000552295 MYCP01106 439 aaPredicted RBP10.76□□□□□ -0.69
BEST3-211ENST00000552295 GCP02774 474 aa10.76□□□□□ -0.69
BEST3-211ENST00000552295 CENPCQ03188 943 aa10.76□□□□□ -0.69
BEST3-211ENST00000552295 LRRC59Q96AG4 307 aaKnown RBP10.76□□□□□ -0.69
BEST3-211ENST00000552295 DCAF5Q96JK2 942 aa10.76□□□□□ -0.69
BEST3-211ENST00000552295 CFAP53Q96M91 514 aa10.76□□□□□ -0.69
BEST3-211ENST00000552295 KIF24Q5T7B8 1368 aa10.76□□□□□ -0.69
BEST3-211ENST00000552295 MAP2K3P46734 347 aa10.75□□□□□ -0.69
BEST3-211ENST00000552295 RTL1A6NKG5 1358 aa10.75□□□□□ -0.69
BEST3-211ENST00000552295 FLT4P35916 1363 aa10.75□□□□□ -0.69
BEST3-211ENST00000552295 RGPD1P0DJD0 1748 aa10.75□□□□□ -0.69
BEST3-211ENST00000552295 ABCC6O95255 1503 aa10.74□□□□□ -0.69
BEST3-211ENST00000552295 PPM1GO15355 546 aaPredicted RBP10.74□□□□□ -0.69
BEST3-211ENST00000552295 IL2RAP01589 272 aa10.74□□□□□ -0.69
BEST3-211ENST00000552295 GTF2E1P29083 439 aaPredicted RBP10.74□□□□□ -0.69
BEST3-211ENST00000552295 ARHGEF25Q86VW2 580 aa10.74□□□□□ -0.69
BEST3-211ENST00000552295 ZSCAN10Q96SZ4 725 aaPredicted RBP10.74□□□□□ -0.69
BEST3-211ENST00000552295 CFHR5Q9BXR6 569 aa10.74□□□□□ -0.69
BEST3-211ENST00000552295 GPAMQ9HCL2 828 aa10.74□□□□□ -0.69
BEST3-211ENST00000552295 MSTNO14793 375 aa10.73□□□□□ -0.69
BEST3-211ENST00000552295 OIP5O43482 229 aa10.73□□□□□ -0.69
BEST3-211ENST00000552295 PHKA2P46019 1235 aa10.73□□□□□ -0.69
BEST3-211ENST00000552295 PLA2G4EQ3MJ16 856 aa10.73□□□□□ -0.69
BEST3-211ENST00000552295 FAM9BQ8IZU0 186 aa10.73□□□□□ -0.69
BEST3-211ENST00000552295 OXCT2Q9BYC2 517 aaPredicted RBP10.73□□□□□ -0.69
BEST3-211ENST00000552295 CEP126Q9P2H0 1117 aa10.73□□□□□ -0.69
BEST3-211ENST00000552295 CPDO75976 1380 aa10.73□□□□□ -0.69
BEST3-211ENST00000552295 LMO7Q8WWI1 1683 aa10.73□□□□□ -0.69
BEST3-211ENST00000552295 A0A1B0GTH6 734 aa10.72□□□□□ -0.69
BEST3-211ENST00000552295 HOXC9P31274 260 aa10.72□□□□□ -0.69
BEST3-211ENST00000552295 AMPHP49418 695 aa10.72□□□□□ -0.69
BEST3-211ENST00000552295 HSP90AB2PQ58FF8 381 aa10.72□□□□□ -0.69
BEST3-211ENST00000552295 GNASQ5JWF2 1037 aa10.72□□□□□ -0.69
BEST3-211ENST00000552295 XAGE2Q96GT9 111 aa10.72□□□□□ -0.69
BEST3-211ENST00000552295 CCDC85AQ96PX6 553 aaPredicted RBP10.72□□□□□ -0.69
BEST3-211ENST00000552295 SNRKQ9NRH2 765 aa10.72□□□□□ -0.69
BEST3-211ENST00000552295 PHF24Q9UPV7 400 aa10.72□□□□□ -0.69
BEST3-211ENST00000552295 RGPD2P0DJD1 1756 aa10.72□□□□□ -0.69
BEST3-211ENST00000552295 DIAPH1O60610 1272 aaKnown RBP10.71□□□□□ -0.69
BEST3-211ENST00000552295 IL13P35225 146 aa10.71□□□□□ -0.69
BEST3-211ENST00000552295 BLMP54132 1417 aaPredicted RBP10.71□□□□□ -0.69
BEST3-211ENST00000552295 ZC3H6P61129 1189 aaKnown RBP10.71□□□□□ -0.69
BEST3-211ENST00000552295 WDR43Q15061 677 aaKnown RBP eCLIP10.71□□□□□ -0.69
BEST3-211ENST00000552295 IP6K1Q92551 441 aa10.71□□□□□ -0.69
BEST3-211ENST00000552295 KIAA0232Q92628 1395 aa10.71□□□□□ -0.69
BEST3-211ENST00000552295 CDCA7Q9BWT1 371 aaPredicted RBP10.71□□□□□ -0.69
BEST3-211ENST00000552295 CAMTA1Q9Y6Y1 1673 aa10.7□□□□□ -0.7
BEST3-211ENST00000552295 EIF4A2Q14240 407 aaKnown RBP10.7□□□□□ -0.7
BEST3-211ENST00000552295 TMEM214Q6NUQ4 689 aaKnown RBP10.7□□□□□ -0.7
BEST3-211ENST00000552295 HRH3Q9Y5N1 445 aa10.7□□□□□ -0.7
BEST3-211ENST00000552295 COL14A1Q05707 1796 aaKnown RBP10.7□□□□□ -0.7
BEST3-211ENST00000552295 FAM208AQ9UK61 1670 aaKnown RBP10.69□□□□□ -0.7
BEST3-211ENST00000552295 ZBTB7CA1YPR0 619 aa10.69□□□□□ -0.7
BEST3-211ENST00000552295 THBS1P07996 1170 aa10.69□□□□□ -0.7
BEST3-211ENST00000552295 CSB-PGBD3P0DP91 1061 aa10.69□□□□□ -0.7
BEST3-211ENST00000552295 BRPF1P55201 1214 aaPredicted RBP10.69□□□□□ -0.7
BEST3-211ENST00000552295 PGBD3Q8N328 593 aa10.69□□□□□ -0.7
BEST3-211ENST00000552295 NUDCQ9Y266 331 aa10.69□□□□□ -0.7
BEST3-211ENST00000552295 PLCH1Q4KWH8 1693 aa10.69□□□□□ -0.7
BEST3-211ENST00000552295 JCADQ9P266 1359 aa10.68□□□□□ -0.7
BEST3-211ENST00000552295 HSPA1LP34931 641 aa10.68□□□□□ -0.7
BEST3-211ENST00000552295 LBRQ14739 615 aaKnown RBP10.68□□□□□ -0.7
BEST3-211ENST00000552295 SPOCK3Q9BQ16 436 aa10.68□□□□□ -0.7
BEST3-211ENST00000552295 FHDC1Q9C0D6 1143 aaPredicted RBP10.68□□□□□ -0.7
BEST3-211ENST00000552295 U2SURPO15042 1029 aaKnown RBP10.67□□□□□ -0.7
BEST3-211ENST00000552295 U2AF1L5P0DN76 240 aaPredicted RBP10.67□□□□□ -0.7
BEST3-211ENST00000552295 U2AF1Q01081 240 aaKnown RBP eCLIP10.67□□□□□ -0.7
BEST3-211ENST00000552295 CHRNA2Q15822 529 aa10.67□□□□□ -0.7
BEST3-211ENST00000552295 C4orf17Q53FE4 359 aa10.67□□□□□ -0.7
BEST3-211ENST00000552295 KLRG1Q96E93 195 aa10.67□□□□□ -0.7
BEST3-211ENST00000552295 YTHDC1Q96MU7 727 aaKnown RBP10.67□□□□□ -0.7
BEST3-211ENST00000552295 PRDM11Q9NQV5 511 aa10.67□□□□□ -0.7
BEST3-211ENST00000552295 IGSF1Q8N6C5 1336 aa10.66□□□□□ -0.7
BEST3-211ENST00000552295 GDF2Q9UK05 429 aaPredicted RBP10.66□□□□□ -0.7
BEST3-211ENST00000552295 NRAPQ86VF7 1730 aa10.66□□□□□ -0.7
BEST3-211ENST00000552295 NCAPD2Q15021 1401 aa10.66□□□□□ -0.7
BEST3-211ENST00000552295 NWD2Q9ULI1 1742 aa10.65□□□□□ -0.7
BEST3-211ENST00000552295 FAM83GA6ND36 823 aa10.65□□□□□ -0.7
BEST3-211ENST00000552295 ITGB2P05107 769 aa10.65□□□□□ -0.7
BEST3-211ENST00000552295 MSX1P28360 303 aa10.65□□□□□ -0.7
BEST3-211ENST00000552295 GALNT6Q8NCL4 622 aa10.65□□□□□ -0.7
BEST3-211ENST00000552295 ANKRD24Q8TF21 1146 aa10.65□□□□□ -0.7
BEST3-211ENST00000552295 LTV1Q96GA3 475 aaPredicted RBP10.65□□□□□ -0.7
BEST3-211ENST00000552295 RUBCNLQ9H714 662 aa10.65□□□□□ -0.7
BEST3-211ENST00000552295 DOLKQ9UPQ8 538 aa10.65□□□□□ -0.7
BEST3-211ENST00000552295 COL5A2P05997 1499 aaPredicted RBP10.65□□□□□ -0.7
BEST3-211ENST00000552295 LRP6O75581 1613 aa10.65□□□□□ -0.7
BEST3-211ENST00000552295 KDRP35968 1356 aa10.65□□□□□ -0.71
BEST3-211ENST00000552295 SHISA8B8ZZ34 492 aa10.64□□□□□ -0.71
BEST3-211ENST00000552295 HMOX1P09601 288 aa10.64□□□□□ -0.71
BEST3-211ENST00000552295 SNRPNP63162 240 aaKnown RBP10.64□□□□□ -0.71
BEST3-211ENST00000552295 HNRNPUQ00839 825 aaKnown RBP eCLIP10.64□□□□□ -0.71
BEST3-211ENST00000552295 USP4Q13107 963 aa10.64□□□□□ -0.71
BEST3-211ENST00000552295 EFHC2Q5JST6 749 aa10.64□□□□□ -0.71
BEST3-211ENST00000552295 AEBP1Q8IUX7 1158 aa10.64□□□□□ -0.71
BEST3-211ENST00000552295 CCDC146Q8IYE0 955 aa10.64□□□□□ -0.71
BEST3-211ENST00000552295 PLEKHF1Q96S99 279 aa10.64□□□□□ -0.71
BEST3-211ENST00000552295 PRM3Q9NNZ6 103 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms