RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-210ENST00000547374 ZSCAN16Q9H4T2 348 aaPredicted RBP15.14■□□□□ 0.01
BRF1-210ENST00000547374 NDUFA8P51970 172 aa15.14■□□□□ 0.01
BRF1-210ENST00000547374 TRDNQ13061 729 aa15.14■□□□□ 0.01
BRF1-210ENST00000547374 PDIA6Q15084 440 aa15.14■□□□□ 0.01
BRF1-210ENST00000547374 CFAP100Q494V2 611 aa15.14■□□□□ 0.01
BRF1-210ENST00000547374 KBTBD3Q8NAB2 608 aa15.14■□□□□ 0.01
BRF1-210ENST00000547374 NAT10Q9H0A0 1025 aaKnown RBP15.14■□□□□ 0.01
BRF1-210ENST00000547374 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.13■□□□□ 0.01
BRF1-210ENST00000547374 EPB41L2O43491 1005 aaKnown RBP15.13■□□□□ 0.01
BRF1-210ENST00000547374 HSPD1P10809 573 aaKnown RBP15.13■□□□□ 0.01
BRF1-210ENST00000547374 ADORA1P30542 326 aa15.13■□□□□ 0.01
BRF1-210ENST00000547374 NCBP1Q09161 790 aaKnown RBP15.13■□□□□ 0.01
BRF1-210ENST00000547374 DPCR1Q3MIW9 517 aa15.13■□□□□ 0.01
BRF1-210ENST00000547374 TOM1L2Q6ZVM7 507 aa15.13■□□□□ 0.01
BRF1-210ENST00000547374 LRRC8AQ8IWT6 810 aa15.13■□□□□ 0.01
BRF1-210ENST00000547374 PCDHA7Q9UN72 937 aa15.13■□□□□ 0.01
BRF1-210ENST00000547374 SLC3A2P08195 630 aaKnown RBP15.13■□□□□ 0.01
BRF1-210ENST00000547374 CCDC158Q5M9N0 1113 aa15.13■□□□□ 0.01
BRF1-210ENST00000547374 SMAP1Q8IYB5 467 aaPredicted RBP15.13■□□□□ 0.01
BRF1-210ENST00000547374 IFNL2Q8IZJ0 200 aa15.13■□□□□ 0.01
BRF1-210ENST00000547374 PHKBQ93100 1093 aa15.13■□□□□ 0.01
BRF1-210ENST00000547374 CGNQ9P2M7 1197 aaKnown RBP15.13■□□□□ 0.01
BRF1-210ENST00000547374 CDK11BP21127 795 aaKnown RBP15.13■□□□□ 0.01
BRF1-210ENST00000547374 ZSWIM4Q9H7M6 989 aa15.13■□□□□ 0.01
BRF1-210ENST00000547374 PRC1O43663 620 aa15.12■□□□□ 0.01
BRF1-210ENST00000547374 SYNE4Q8N205 404 aa15.12■□□□□ 0.01
BRF1-210ENST00000547374 MRPS27Q92552 414 aaKnown RBP15.12■□□□□ 0.01
BRF1-210ENST00000547374 RIMBP3CA6NJZ7 1639 aa15.12■□□□□ 0.01
BRF1-210ENST00000547374 RIMBP3BA6NNM3 1639 aa15.12■□□□□ 0.01
BRF1-210ENST00000547374 RIMBP3Q9UFD9 1639 aa15.12■□□□□ 0.01
BRF1-210ENST00000547374 SFPQP23246 707 aaKnown RBP eCLIP15.12■□□□□ 0.01
BRF1-210ENST00000547374 INCENPQ9NQS7 918 aa15.12■□□□□ 0.01
BRF1-210ENST00000547374 DENND2AQ9ULE3 1009 aa15.12■□□□□ 0.01
BRF1-210ENST00000547374 TECPR2O15040 1411 aa15.12■□□□□ 0.01
BRF1-210ENST00000547374 TPM4P67936 248 aa15.12■□□□□ 0.01
BRF1-210ENST00000547374 XPO4Q9C0E2 1151 aaKnown RBP15.12■□□□□ 0.01
BRF1-210ENST00000547374 CEMIPQ8WUJ3 1361 aa15.11■□□□□ 0.01
BRF1-210ENST00000547374 IMMTQ16891 758 aaKnown RBP15.11■□□□□ 0.01
BRF1-210ENST00000547374 KIF18AQ8NI77 898 aa15.11■□□□□ 0.01
BRF1-210ENST00000547374 SMTNL1A8MU46 457 aa15.11■□□□□ 0.01
BRF1-210ENST00000547374 PDIA3P30101 505 aaKnown RBP15.11■□□□□ 0.01
BRF1-210ENST00000547374 ADD1P35611 737 aaKnown RBP15.11■□□□□ 0.01
BRF1-210ENST00000547374 FAM160A1Q05DH4 1040 aa15.11■□□□□ 0.01
BRF1-210ENST00000547374 URI1O94763 535 aaPredicted RBP15.11■□□□□ 0.01
BRF1-210ENST00000547374 CMTR1Q8N1G2 835 aaKnown RBP15.11■□□□□ 0.01
BRF1-210ENST00000547374 TDRD7Q8NHU6 1098 aaKnown RBP15.11■□□□□ 0.01
BRF1-210ENST00000547374 COL15A1P39059 1388 aa15.11■□□□□ 0.01
BRF1-210ENST00000547374 C3P01024 1663 aa15.1■□□□□ 0.01
BRF1-210ENST00000547374 ELP1O95163 1332 aa15.1■□□□□ 0.01
BRF1-210ENST00000547374 M0R2C6 588 aa15.1■□□□□ 0.01
BRF1-210ENST00000547374 SNW1Q13573 536 aaKnown RBP15.1■□□□□ 0.01
BRF1-210ENST00000547374 OSBP2Q969R2 916 aa15.1■□□□□ 0.01
BRF1-210ENST00000547374 CNNM1Q9NRU3 951 aa15.1■□□□□ 0.01
BRF1-210ENST00000547374 CWC25Q9NXE8 425 aaPredicted RBP15.1■□□□□ 0.01
BRF1-210ENST00000547374 DNAI1Q9UI46 699 aa15.1■□□□□ 0.01
BRF1-210ENST00000547374 SPATA31D1Q6ZQQ2 1576 aa15.1■□□□□ 0.01
BRF1-210ENST00000547374 ZNF609O15014 1411 aa15.1■□□□□ 0.01
BRF1-210ENST00000547374 CTDNEP1O95476 244 aa15.1■□□□□ 0.01
BRF1-210ENST00000547374 ZKSCAN3Q9BRR0 538 aa15.1■□□□□ 0.01
BRF1-210ENST00000547374 IQSEC3Q9UPP2 1182 aaPredicted RBP15.1■□□□□ 0.01
BRF1-210ENST00000547374 ZNF213O14771 459 aa15.1■□□□□ 0.01
BRF1-210ENST00000547374 SPTLC2O15270 562 aa15.1■□□□□ 0.01
BRF1-210ENST00000547374 POLR3GO15318 223 aaPredicted RBP15.1■□□□□ 0.01
BRF1-210ENST00000547374 ATF3P18847 181 aa15.1■□□□□ 0.01
BRF1-210ENST00000547374 HAUS7Q99871 368 aa15.1■□□□□ 0.01
BRF1-210ENST00000547374 PXDNQ92626 1479 aa15.1■□□□□ 0.01
BRF1-210ENST00000547374 ZSCAN20P17040 1043 aaPredicted RBP15.09■□□□□ 0.01
BRF1-210ENST00000547374 ERCC6LQ2NKX8 1250 aa15.09■□□□□ 0.01
BRF1-210ENST00000547374 METTL24Q5JXM2 366 aa15.09■□□□□ 0.01
BRF1-210ENST00000547374 CPLX3Q8WVH0 158 aa15.09■□□□□ 0.01
BRF1-210ENST00000547374 CLIC6Q96NY7 704 aa15.09■□□□□ 0.01
BRF1-210ENST00000547374 COPRSQ9NQ92 184 aa15.09■□□□□ 0.01
BRF1-210ENST00000547374 ST7Q9NRC1 585 aa15.09■□□□□ 0.01
BRF1-210ENST00000547374 USP42Q9H9J4 1324 aaKnown RBP15.09■□□□□ 0.01
BRF1-210ENST00000547374 SNAP23O00161 211 aa15.09■□□□□ 0.01
BRF1-210ENST00000547374 ATP1A3P13637 1013 aa15.09■□□□□ 0.01
BRF1-210ENST00000547374 PHKG2P15735 406 aa15.09■□□□□ 0.01
BRF1-210ENST00000547374 ZAP70P43403 619 aa15.09■□□□□ 0.01
BRF1-210ENST00000547374 NUP133Q8WUM0 1156 aa15.09■□□□□ 0.01
BRF1-210ENST00000547374 RNF113AO15541 343 aaKnown RBP15.09■□□□□ 0.01
BRF1-210ENST00000547374 KLHL10Q6JEL2 608 aa15.09■□□□□ 0.01
BRF1-210ENST00000547374 PLA2G4DQ86XP0 818 aa15.09■□□□□ 0.01
BRF1-210ENST00000547374 MNS1Q8NEH6 495 aa15.09■□□□□ 0.01
BRF1-210ENST00000547374 PFKFB2O60825 505 aa15.08■□□□□ 0.01
BRF1-210ENST00000547374 PRDM4Q9UKN5 801 aa15.08■□□□□ 0.01
BRF1-210ENST00000547374 MAST3O60307 1309 aa15.08■□□□□ 0
BRF1-210ENST00000547374 MTMR7Q9Y216 660 aa15.08■□□□□ 0
BRF1-210ENST00000547374 HMGB1P09429 215 aaKnown RBP15.08■□□□□ 0
BRF1-210ENST00000547374 TRIM29Q14134 588 aa15.08■□□□□ 0
BRF1-210ENST00000547374 NRXN3Q9Y4C0 1643 aa15.08■□□□□ 0
BRF1-210ENST00000547374 UBE2Q2LH0YL09 131 aa15.07■□□□□ 0
BRF1-210ENST00000547374 FGAP02671 866 aa15.07■□□□□ 0
BRF1-210ENST00000547374 CYP27B1O15528 508 aa15.07■□□□□ 0
BRF1-210ENST00000547374 ZNF202O95125 648 aa15.07■□□□□ 0
BRF1-210ENST00000547374 SCARF1Q14162 830 aa15.07■□□□□ 0
BRF1-210ENST00000547374 IQCB1Q15051 598 aa15.07■□□□□ 0
BRF1-210ENST00000547374 PRDM11Q9NQV5 511 aa15.07■□□□□ 0
BRF1-210ENST00000547374 B4E1Z4 1266 aa15.07■□□□□ 0
BRF1-210ENST00000547374 EVA1CP58658 441 aa15.07■□□□□ 0
BRF1-210ENST00000547374 SLC9C2Q5TAH2 1124 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms