RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 CETN1Q12798 172 aa9.73□□□□□ -0.85
ATXN3-216ENST00000545170 UAP1Q16222 522 aaPredicted RBP9.73□□□□□ -0.85
ATXN3-216ENST00000545170 TMEM266Q2M3C6 531 aa9.73□□□□□ -0.85
ATXN3-216ENST00000545170 SNX21Q969T3 373 aa9.73□□□□□ -0.85
ATXN3-216ENST00000545170 SYTL4Q96C24 671 aaPredicted RBP9.73□□□□□ -0.85
ATXN3-216ENST00000545170 AKAP2Q9Y2D5 859 aa9.73□□□□□ -0.85
ATXN3-216ENST00000545170 NKTRP30414 1462 aaKnown RBP9.73□□□□□ -0.85
ATXN3-216ENST00000545170 CCT5P48643 541 aa9.73□□□□□ -0.85
ATXN3-216ENST00000545170 RASSF2P50749 326 aa9.73□□□□□ -0.85
ATXN3-216ENST00000545170 THEGQ9P2T0 379 aa9.73□□□□□ -0.85
ATXN3-216ENST00000545170 ARID5AQ03989 594 aa9.73□□□□□ -0.85
ATXN3-216ENST00000545170 CCDC82Q8N4S0 544 aa9.73□□□□□ -0.85
ATXN3-216ENST00000545170 MRPS27Q92552 414 aaKnown RBP9.73□□□□□ -0.85
ATXN3-216ENST00000545170 HAUS1Q96CS2 278 aa9.73□□□□□ -0.85
ATXN3-216ENST00000545170 BICD1Q96G01 975 aa9.73□□□□□ -0.85
ATXN3-216ENST00000545170 FAN1Q9Y2M0 1017 aa9.73□□□□□ -0.85
ATXN3-216ENST00000545170 IGHDP01880 384 aa9.73□□□□□ -0.85
ATXN3-216ENST00000545170 RUFY4Q6ZNE9 571 aa9.73□□□□□ -0.85
ATXN3-216ENST00000545170 KLHL34Q8N239 644 aa9.73□□□□□ -0.85
ATXN3-216ENST00000545170 CCDC42Q96M95 316 aa9.73□□□□□ -0.85
ATXN3-216ENST00000545170 FERMT1Q9BQL6 677 aa9.73□□□□□ -0.85
ATXN3-216ENST00000545170 PYM1Q9BRP8 204 aaKnown RBP9.73□□□□□ -0.85
ATXN3-216ENST00000545170 MX2P20592 715 aa9.72□□□□□ -0.85
ATXN3-216ENST00000545170 SEPT8Q92599 483 aa9.72□□□□□ -0.85
ATXN3-216ENST00000545170 BAZ1AQ9NRL2 1556 aaPredicted RBP9.72□□□□□ -0.85
ATXN3-216ENST00000545170 AKR1B15C9JRZ8 316 aaPredicted RBP9.72□□□□□ -0.85
ATXN3-216ENST00000545170 GOLGA8KD6RF30 607 aa9.72□□□□□ -0.85
ATXN3-216ENST00000545170 PPFIA4O75335 1185 aa9.72□□□□□ -0.85
ATXN3-216ENST00000545170 GJC1P36383 396 aa9.72□□□□□ -0.85
ATXN3-216ENST00000545170 C8orf34Q49A92 452 aa9.72□□□□□ -0.85
ATXN3-216ENST00000545170 CALML4Q96GE6 196 aa9.72□□□□□ -0.85
ATXN3-216ENST00000545170 UTP11Q9Y3A2 253 aaKnown RBP9.72□□□□□ -0.85
ATXN3-216ENST00000545170 POLD1P28340 1107 aa9.72□□□□□ -0.85
ATXN3-216ENST00000545170 GPR161Q8N6U8 529 aaKnown RBP9.72□□□□□ -0.85
ATXN3-216ENST00000545170 BCAS4Q8TDM0 211 aa9.72□□□□□ -0.85
ATXN3-216ENST00000545170 Q9H521 79 aa9.72□□□□□ -0.85
ATXN3-216ENST00000545170 SEC63Q9UGP8 760 aaKnown RBP9.72□□□□□ -0.85
ATXN3-216ENST00000545170 PLEKHA4Q9H4M7 779 aa9.72□□□□□ -0.85
ATXN3-216ENST00000545170 SPINK5Q9NQ38 1064 aaPredicted RBP9.72□□□□□ -0.85
ATXN3-216ENST00000545170 GNL3LQ9NVN8 582 aaKnown RBP9.72□□□□□ -0.85
ATXN3-216ENST00000545170 FRMD4BQ9Y2L6 1034 aa9.72□□□□□ -0.85
ATXN3-216ENST00000545170 SLC12A7Q9Y666 1083 aa9.72□□□□□ -0.85
ATXN3-216ENST00000545170 DHX29Q7Z478 1369 aaKnown RBP9.72□□□□□ -0.85
ATXN3-216ENST00000545170 GOLGA8AA7E2F4 631 aa9.72□□□□□ -0.85
ATXN3-216ENST00000545170 IRX4P78413 519 aa9.72□□□□□ -0.85
ATXN3-216ENST00000545170 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.72□□□□□ -0.85
ATXN3-216ENST00000545170 TEX2Q8IWB9 1127 aa9.72□□□□□ -0.85
ATXN3-216ENST00000545170 NECAB1Q8N987 351 aa9.72□□□□□ -0.85
ATXN3-216ENST00000545170 CHMP2AO43633 222 aa9.72□□□□□ -0.85
ATXN3-216ENST00000545170 PPFIA3O75145 1194 aa9.72□□□□□ -0.85
ATXN3-216ENST00000545170 PALMDQ9NP74 551 aa9.72□□□□□ -0.85
ATXN3-216ENST00000545170 PLCB1Q9NQ66 1216 aa9.72□□□□□ -0.85
ATXN3-216ENST00000545170 SPG7Q9UQ90 795 aa9.72□□□□□ -0.85
ATXN3-216ENST00000545170 PABPN1LA6NDY0 278 aaKnown RBP9.71□□□□□ -0.85
ATXN3-216ENST00000545170 GLRX3O76003 335 aaKnown RBP9.71□□□□□ -0.85
ATXN3-216ENST00000545170 HSP90AA5PQ58FG0 334 aa9.71□□□□□ -0.85
ATXN3-216ENST00000545170 GAS2L2Q8NHY3 880 aa9.71□□□□□ -0.85
ATXN3-216ENST00000545170 MGARPQ8TDB4 240 aa9.71□□□□□ -0.85
ATXN3-216ENST00000545170 JAKMIP2Q96AA8 810 aa9.71□□□□□ -0.85
ATXN3-216ENST00000545170 MRRFQ96E11 262 aaKnown RBP9.71□□□□□ -0.85
ATXN3-216ENST00000545170 RAB34Q9BZG1 259 aa9.71□□□□□ -0.85
ATXN3-216ENST00000545170 YY1AP1Q9H869 796 aa9.71□□□□□ -0.85
ATXN3-216ENST00000545170 CALCOCO2Q13137 446 aa9.71□□□□□ -0.85
ATXN3-216ENST00000545170 TTC19Q6DKK2 380 aaPredicted RBP9.71□□□□□ -0.85
ATXN3-216ENST00000545170 SATB2Q9UPW6 733 aa9.71□□□□□ -0.85
ATXN3-216ENST00000545170 EVA1CP58658 441 aa9.71□□□□□ -0.86
ATXN3-216ENST00000545170 MRPL46Q9H2W6 279 aaKnown RBP9.71□□□□□ -0.86
ATXN3-216ENST00000545170 SUFUQ9UMX1 484 aa9.71□□□□□ -0.86
ATXN3-216ENST00000545170 TACC3Q9Y6A5 838 aa9.71□□□□□ -0.86
ATXN3-216ENST00000545170 BMP2KLQ5H9B9 411 aa9.71□□□□□ -0.86
ATXN3-216ENST00000545170 PLEKHH2Q8IVE3 1493 aa9.71□□□□□ -0.86
ATXN3-216ENST00000545170 ZNF500O60304 480 aaPredicted RBP9.71□□□□□ -0.86
ATXN3-216ENST00000545170 ATP1A2P50993 1020 aa9.71□□□□□ -0.86
ATXN3-216ENST00000545170 SND1Q7KZF4 910 aaKnown RBP eCLIP9.71□□□□□ -0.86
ATXN3-216ENST00000545170 KCNG4Q8TDN1 519 aa9.71□□□□□ -0.86
ATXN3-216ENST00000545170 SAAL1Q96ER3 474 aa9.71□□□□□ -0.86
ATXN3-216ENST00000545170 SPAG1Q07617 926 aa9.7□□□□□ -0.86
ATXN3-216ENST00000545170 KIF1BPQ96EK5 621 aa9.7□□□□□ -0.86
ATXN3-216ENST00000545170 POLA1P09884 1462 aaPredicted RBP9.7□□□□□ -0.86
ATXN3-216ENST00000545170 BRD3Q15059 726 aa9.7□□□□□ -0.86
ATXN3-216ENST00000545170 SSX2IPQ9Y2D8 614 aa9.7□□□□□ -0.86
ATXN3-216ENST00000545170 PHEXP78562 749 aa9.7□□□□□ -0.86
ATXN3-216ENST00000545170 KIF6Q6ZMV9 814 aa9.7□□□□□ -0.86
ATXN3-216ENST00000545170 ARMC9Q7Z3E5 817 aa9.7□□□□□ -0.86
ATXN3-216ENST00000545170 ATP2A3Q93084 1043 aa9.7□□□□□ -0.86
ATXN3-216ENST00000545170 SH3GL3Q99963 347 aa9.7□□□□□ -0.86
ATXN3-216ENST00000545170 SCOCQ9UIL1 159 aa9.7□□□□□ -0.86
ATXN3-216ENST00000545170 NUB1Q9Y5A7 615 aa9.7□□□□□ -0.86
ATXN3-216ENST00000545170 A0A087WZG4 1122 aa9.7□□□□□ -0.86
ATXN3-216ENST00000545170 ZNF75DP51815 510 aa9.7□□□□□ -0.86
ATXN3-216ENST00000545170 RNASE9P60153 205 aaKnown RBP9.7□□□□□ -0.86
ATXN3-216ENST00000545170 HDGFL1Q5TGJ6 251 aa9.7□□□□□ -0.86
ATXN3-216ENST00000545170 SMC5Q8IY18 1101 aa9.7□□□□□ -0.86
ATXN3-216ENST00000545170 AIDAQ96BJ3 306 aa9.7□□□□□ -0.86
ATXN3-216ENST00000545170 GDAP1L1Q96MZ0 367 aa9.7□□□□□ -0.86
ATXN3-216ENST00000545170 BOLA2Q9H3K6 86 aa9.7□□□□□ -0.86
ATXN3-216ENST00000545170 SLC4A8Q2Y0W8 1093 aa9.7□□□□□ -0.86
ATXN3-216ENST00000545170 STRN4Q9NRL3 753 aa9.7□□□□□ -0.86
ATXN3-216ENST00000545170 A0A087WUV0 522 aaPredicted RBP9.7□□□□□ -0.86
ATXN3-216ENST00000545170 TAF11Q15544 211 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms