RNA–Protein interactions for RNA: ENST00000535544.1

LINC00943-203, long intergenic non-protein coding RNA 943, humanhuman

TSL 2 BASIC

Gene LINC00943, Length 2,815 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-203ENST00000535544 RNF113AO15541 343 aaKnown RBP10.97□□□□□ -0.65
LINC00943-203ENST00000535544 RPS6KB1P23443 525 aa10.97□□□□□ -0.65
LINC00943-203ENST00000535544 GJB2P29033 226 aa10.97□□□□□ -0.65
LINC00943-203ENST00000535544 BCAMP50895 628 aa10.97□□□□□ -0.65
LINC00943-203ENST00000535544 CCDC102BQ68D86 513 aa10.97□□□□□ -0.65
LINC00943-203ENST00000535544 CLEC17AQ6ZS10 378 aa10.97□□□□□ -0.65
LINC00943-203ENST00000535544 EPB41L2O43491 1005 aaKnown RBP10.97□□□□□ -0.65
LINC00943-203ENST00000535544 BLOC1S2Q6QNY1 142 aa10.97□□□□□ -0.65
LINC00943-203ENST00000535544 INTS4Q96HW7 963 aaKnown RBP10.97□□□□□ -0.65
LINC00943-203ENST00000535544 SPEF2Q9C093 1822 aa10.97□□□□□ -0.65
LINC00943-203ENST00000535544 JCADQ9P266 1359 aa10.96□□□□□ -0.65
LINC00943-203ENST00000535544 PHF14O94880 888 aa10.96□□□□□ -0.65
LINC00943-203ENST00000535544 CAVIN1Q6NZI2 390 aaKnown RBP10.96□□□□□ -0.65
LINC00943-203ENST00000535544 Q6ZUG5 572 aa10.96□□□□□ -0.65
LINC00943-203ENST00000535544 JAK2O60674 1132 aa10.96□□□□□ -0.66
LINC00943-203ENST00000535544 FERMT3Q86UX7 667 aa10.96□□□□□ -0.66
LINC00943-203ENST00000535544 RAB11FIP4Q86YS3 637 aa10.96□□□□□ -0.66
LINC00943-203ENST00000535544 TM6SF1Q9BZW5 370 aa10.96□□□□□ -0.66
LINC00943-203ENST00000535544 WWC3Q9ULE0 1092 aa10.96□□□□□ -0.66
LINC00943-203ENST00000535544 LAMA4Q16363 1823 aa10.96□□□□□ -0.66
LINC00943-203ENST00000535544 IDH1O75874 414 aaKnown RBP10.95□□□□□ -0.66
LINC00943-203ENST00000535544 NEK1Q96PY6 1258 aa10.95□□□□□ -0.66
LINC00943-203ENST00000535544 LRRC4BQ9NT99 713 aa10.95□□□□□ -0.66
LINC00943-203ENST00000535544 AKAP2Q9Y2D5 859 aa10.95□□□□□ -0.66
LINC00943-203ENST00000535544 NWD2Q9ULI1 1742 aa10.95□□□□□ -0.66
LINC00943-203ENST00000535544 FSD2A1L4K1 749 aa10.95□□□□□ -0.66
LINC00943-203ENST00000535544 SMIM22K7EJ46 135 aa10.95□□□□□ -0.66
LINC00943-203ENST00000535544 GNPATO15228 680 aa10.95□□□□□ -0.66
LINC00943-203ENST00000535544 FOSBP53539 338 aa10.95□□□□□ -0.66
LINC00943-203ENST00000535544 SMC3Q9UQE7 1217 aa10.95□□□□□ -0.66
LINC00943-203ENST00000535544 CNPY2Q9Y2B0 182 aa10.95□□□□□ -0.66
LINC00943-203ENST00000535544 FGAP02671 866 aa10.94□□□□□ -0.66
LINC00943-203ENST00000535544 FGFR2P21802 821 aa10.94□□□□□ -0.66
LINC00943-203ENST00000535544 SLC9C2Q5TAH2 1124 aa10.94□□□□□ -0.66
LINC00943-203ENST00000535544 CELF1Q92879 486 aaKnown RBP10.94□□□□□ -0.66
LINC00943-203ENST00000535544 BRF1Q92994 677 aa10.94□□□□□ -0.66
LINC00943-203ENST00000535544 DDX11Q96FC9 970 aa10.94□□□□□ -0.66
LINC00943-203ENST00000535544 MPHOSPH8Q99549 860 aa10.94□□□□□ -0.66
LINC00943-203ENST00000535544 HMG20BQ9P0W2 317 aa10.94□□□□□ -0.66
LINC00943-203ENST00000535544 KLRK1P26718 216 aa10.94□□□□□ -0.66
LINC00943-203ENST00000535544 APOBRQ0VD83 1088 aa10.94□□□□□ -0.66
LINC00943-203ENST00000535544 RASGRF1Q13972 1273 aa10.94□□□□□ -0.66
LINC00943-203ENST00000535544 MEX3CQ5U5Q3 659 aaKnown RBP10.94□□□□□ -0.66
LINC00943-203ENST00000535544 STK11IPQ8N1F8 1099 aa10.94□□□□□ -0.66
LINC00943-203ENST00000535544 NCOA5Q9HCD5 579 aaKnown RBP10.94□□□□□ -0.66
LINC00943-203ENST00000535544 AFF2P51816 1311 aa10.94□□□□□ -0.66
LINC00943-203ENST00000535544 DDX60Q8IY21 1712 aaKnown RBP10.94□□□□□ -0.66
LINC00943-203ENST00000535544 E7EWF7 191 aa10.94□□□□□ -0.66
LINC00943-203ENST00000535544 STX6O43752 255 aa10.94□□□□□ -0.66
LINC00943-203ENST00000535544 CCT2P78371 535 aaKnown RBP10.94□□□□□ -0.66
LINC00943-203ENST00000535544 GJD4Q96KN9 370 aaPredicted RBP10.94□□□□□ -0.66
LINC00943-203ENST00000535544 HELLSQ9NRZ9 838 aa10.94□□□□□ -0.66
LINC00943-203ENST00000535544 TMEM63CQ9P1W3 806 aa10.94□□□□□ -0.66
LINC00943-203ENST00000535544 CHRNDQ07001 517 aa10.93□□□□□ -0.66
LINC00943-203ENST00000535544 RNF20Q5VTR2 975 aa10.93□□□□□ -0.66
LINC00943-203ENST00000535544 USP48Q86UV5 1035 aa10.93□□□□□ -0.66
LINC00943-203ENST00000535544 ARHGEF1Q92888 912 aaKnown RBP10.93□□□□□ -0.66
LINC00943-203ENST00000535544 CCNL1Q9UK58 526 aaPredicted RBP10.93□□□□□ -0.66
LINC00943-203ENST00000535544 ABCC12Q96J65 1359 aa10.93□□□□□ -0.66
LINC00943-203ENST00000535544 VPS37CA5D8V6 355 aaPredicted RBP10.93□□□□□ -0.66
LINC00943-203ENST00000535544 GOLGA6L3A6NEY3 463 aa10.93□□□□□ -0.66
LINC00943-203ENST00000535544 GPAA1O43292 621 aa10.93□□□□□ -0.66
LINC00943-203ENST00000535544 GYG1P46976 350 aa10.93□□□□□ -0.66
LINC00943-203ENST00000535544 TSGA10IPQ3SY00 556 aa10.93□□□□□ -0.66
LINC00943-203ENST00000535544 MTMR6Q9Y217 621 aa10.93□□□□□ -0.66
LINC00943-203ENST00000535544 ZNF532Q9HCE3 1301 aa10.92□□□□□ -0.66
LINC00943-203ENST00000535544 BTAF1O14981 1849 aa10.92□□□□□ -0.66
LINC00943-203ENST00000535544 PSMA5P28066 241 aa10.92□□□□□ -0.66
LINC00943-203ENST00000535544 CDC37L1Q7L3B6 337 aa10.92□□□□□ -0.66
LINC00943-203ENST00000535544 SMARCC1Q92922 1105 aaPredicted RBP10.92□□□□□ -0.66
LINC00943-203ENST00000535544 NBPF3Q9H094 633 aa10.92□□□□□ -0.66
LINC00943-203ENST00000535544 NAP1L2Q9ULW6 460 aaPredicted RBP10.92□□□□□ -0.66
LINC00943-203ENST00000535544 JAG2Q9Y219 1238 aa10.92□□□□□ -0.66
LINC00943-203ENST00000535544 U3KPZ7 1027 aaPredicted RBP10.92□□□□□ -0.66
LINC00943-203ENST00000535544 COL5A3P25940 1745 aaPredicted RBP10.92□□□□□ -0.66
LINC00943-203ENST00000535544 PRKAB2O43741 272 aa10.92□□□□□ -0.66
LINC00943-203ENST00000535544 ZSCAN22P10073 491 aaPredicted RBP10.92□□□□□ -0.66
LINC00943-203ENST00000535544 DNM1Q05193 864 aaKnown RBP10.92□□□□□ -0.66
LINC00943-203ENST00000535544 SCRN1Q12765 414 aa10.92□□□□□ -0.66
LINC00943-203ENST00000535544 KLHL40Q2TBA0 621 aa10.92□□□□□ -0.66
LINC00943-203ENST00000535544 SEPT12Q8IYM1 358 aa10.92□□□□□ -0.66
LINC00943-203ENST00000535544 CERKQ8TCT0 537 aa10.92□□□□□ -0.66
LINC00943-203ENST00000535544 TAOK2Q9UL54 1235 aa10.92□□□□□ -0.66
LINC00943-203ENST00000535544 TACC3Q9Y6A5 838 aa10.92□□□□□ -0.66
LINC00943-203ENST00000535544 PUM3Q15397 648 aaKnown RBP10.91□□□□□ -0.66
LINC00943-203ENST00000535544 LPIN2Q92539 896 aa10.91□□□□□ -0.66
LINC00943-203ENST00000535544 FBXO3Q9UK99 471 aa10.91□□□□□ -0.66
LINC00943-203ENST00000535544 GOLGA6L22H0YM25 854 aa10.91□□□□□ -0.66
LINC00943-203ENST00000535544 GTF2E1P29083 439 aaPredicted RBP10.91□□□□□ -0.66
LINC00943-203ENST00000535544 ADD2P35612 726 aa10.91□□□□□ -0.66
LINC00943-203ENST00000535544 CCDC152Q4G0S7 254 aa10.91□□□□□ -0.66
LINC00943-203ENST00000535544 SENP2Q9HC62 589 aa10.91□□□□□ -0.66
LINC00943-203ENST00000535544 FIBPO43427 364 aa10.9□□□□□ -0.66
LINC00943-203ENST00000535544 KDM4AO75164 1064 aa10.9□□□□□ -0.66
LINC00943-203ENST00000535544 CTDNEP1O95476 244 aa10.9□□□□□ -0.66
LINC00943-203ENST00000535544 HSP90B1P14625 803 aaKnown RBP10.9□□□□□ -0.66
LINC00943-203ENST00000535544 EXOSC10Q01780 885 aaKnown RBP10.9□□□□□ -0.66
LINC00943-203ENST00000535544 ZSCAN23Q3MJ62 389 aa10.9□□□□□ -0.66
LINC00943-203ENST00000535544 PARP10Q53GL7 1025 aa10.9□□□□□ -0.66
LINC00943-203ENST00000535544 FAM196AQ6ZSG2 479 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms