RNA–Protein interactions for RNA: ENST00000504669.5

ITGA1-203, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 6,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-203ENST00000504669 GFM2Q969S9 779 aaKnown RBP11.71□□□□□ -0.53
ITGA1-203ENST00000504669 DACT3Q96B18 629 aaPredicted RBP11.71□□□□□ -0.53
ITGA1-203ENST00000504669 TSG101Q99816 390 aa11.71□□□□□ -0.53
ITGA1-203ENST00000504669 TMEM232C9JQI7 657 aa11.71□□□□□ -0.53
ITGA1-203ENST00000504669 PLCB4Q15147 1175 aa11.71□□□□□ -0.53
ITGA1-203ENST00000504669 IFI16Q16666 785 aaKnown RBP11.71□□□□□ -0.53
ITGA1-203ENST00000504669 VPS52Q8N1B4 723 aa11.71□□□□□ -0.53
ITGA1-203ENST00000504669 CCDC7Q96M83 1385 aa11.71□□□□□ -0.53
ITGA1-203ENST00000504669 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.71□□□□□ -0.53
ITGA1-203ENST00000504669 PPP1R9BQ96SB3 815 aa11.71□□□□□ -0.53
ITGA1-203ENST00000504669 GDPD2Q9HCC8 539 aa11.71□□□□□ -0.53
ITGA1-203ENST00000504669 TMEM51Q9NW97 253 aa11.71□□□□□ -0.53
ITGA1-203ENST00000504669 SF3B2Q13435 895 aaKnown RBP11.71□□□□□ -0.54
ITGA1-203ENST00000504669 TRIM42Q8IWZ5 723 aa11.71□□□□□ -0.54
ITGA1-203ENST00000504669 HVCN1Q96D96 273 aa11.71□□□□□ -0.54
ITGA1-203ENST00000504669 NOP53Q9NZM5 478 aaKnown RBP11.71□□□□□ -0.54
ITGA1-203ENST00000504669 HIP1O00291 1037 aa11.71□□□□□ -0.54
ITGA1-203ENST00000504669 ATP8B1O43520 1251 aa11.71□□□□□ -0.54
ITGA1-203ENST00000504669 PHBP35232 272 aa11.71□□□□□ -0.54
ITGA1-203ENST00000504669 CASP10Q92851 521 aa11.71□□□□□ -0.54
ITGA1-203ENST00000504669 KIF9Q9HAQ2 790 aa11.71□□□□□ -0.54
ITGA1-203ENST00000504669 NKIRAS1Q9NYS0 192 aa11.71□□□□□ -0.54
ITGA1-203ENST00000504669 BAG2O95816 211 aa11.7□□□□□ -0.54
ITGA1-203ENST00000504669 GJA8P48165 433 aa11.7□□□□□ -0.54
ITGA1-203ENST00000504669 SLC44A4Q53GD3 710 aa11.7□□□□□ -0.54
ITGA1-203ENST00000504669 TTC1Q99614 292 aa11.7□□□□□ -0.54
ITGA1-203ENST00000504669 RHBDL2Q9NX52 303 aa11.7□□□□□ -0.54
ITGA1-203ENST00000504669 MAP3K7O43318 606 aa11.7□□□□□ -0.54
ITGA1-203ENST00000504669 ERCC5P28715 1186 aaPredicted RBP11.7□□□□□ -0.54
ITGA1-203ENST00000504669 NOP14P78316 857 aaKnown RBP11.7□□□□□ -0.54
ITGA1-203ENST00000504669 PDE3AQ14432 1141 aa11.7□□□□□ -0.54
ITGA1-203ENST00000504669 INAQ16352 499 aa11.7□□□□□ -0.54
ITGA1-203ENST00000504669 CHD1LQ86WJ1 897 aa11.7□□□□□ -0.54
ITGA1-203ENST00000504669 FBXO41Q8TF61 875 aa11.7□□□□□ -0.54
ITGA1-203ENST00000504669 CCDC43Q96MW1 224 aaKnown RBP11.7□□□□□ -0.54
ITGA1-203ENST00000504669 CNGA1P29973 690 aa11.7□□□□□ -0.54
ITGA1-203ENST00000504669 GPR101Q96P66 508 aaPredicted RBP11.7□□□□□ -0.54
ITGA1-203ENST00000504669 MX2P20592 715 aa11.7□□□□□ -0.54
ITGA1-203ENST00000504669 TSNARE1Q96NA8 513 aa11.7□□□□□ -0.54
ITGA1-203ENST00000504669 APOEP02649 317 aa11.7□□□□□ -0.54
ITGA1-203ENST00000504669 KRT18P05783 430 aaKnown RBP11.7□□□□□ -0.54
ITGA1-203ENST00000504669 LMNB2Q03252 620 aa11.7□□□□□ -0.54
ITGA1-203ENST00000504669 CCDC80Q76M96 950 aa11.7□□□□□ -0.54
ITGA1-203ENST00000504669 RPGRIP1Q96KN7 1286 aa11.7□□□□□ -0.54
ITGA1-203ENST00000504669 TBC1D32Q96NH3 1257 aa11.7□□□□□ -0.54
ITGA1-203ENST00000504669 TSGA10Q9BZW7 698 aa11.7□□□□□ -0.54
ITGA1-203ENST00000504669 WBP4O75554 376 aaKnown RBP11.69□□□□□ -0.54
ITGA1-203ENST00000504669 FAM133BQ5BKY9 247 aaKnown RBP11.69□□□□□ -0.54
ITGA1-203ENST00000504669 OSBPL1AQ9BXW6 950 aa11.69□□□□□ -0.54
ITGA1-203ENST00000504669 CTTNBP2NLQ9P2B4 639 aa11.69□□□□□ -0.54
ITGA1-203ENST00000504669 EIF2S2P20042 333 aaKnown RBP11.69□□□□□ -0.54
ITGA1-203ENST00000504669 PSMC1P62191 440 aaKnown RBP11.69□□□□□ -0.54
ITGA1-203ENST00000504669 MECOMQ03112 1051 aa11.69□□□□□ -0.54
ITGA1-203ENST00000504669 EXOC4Q96A65 974 aa11.69□□□□□ -0.54
ITGA1-203ENST00000504669 NEK1Q96PY6 1258 aa11.69□□□□□ -0.54
ITGA1-203ENST00000504669 MRPL46Q9H2W6 279 aaKnown RBP11.69□□□□□ -0.54
ITGA1-203ENST00000504669 APAF1O14727 1248 aa11.69□□□□□ -0.54
ITGA1-203ENST00000504669 RAB3GAP1Q15042 981 aa11.69□□□□□ -0.54
ITGA1-203ENST00000504669 ATP2B3Q16720 1220 aa11.69□□□□□ -0.54
ITGA1-203ENST00000504669 HHATQ5VTY9 493 aa11.69□□□□□ -0.54
ITGA1-203ENST00000504669 RINLQ6ZS11 566 aa11.69□□□□□ -0.54
ITGA1-203ENST00000504669 VPS36Q86VN1 386 aa11.69□□□□□ -0.54
ITGA1-203ENST00000504669 ZNF653Q96CK0 615 aa11.69□□□□□ -0.54
ITGA1-203ENST00000504669 MED4Q9NPJ6 270 aa11.69□□□□□ -0.54
ITGA1-203ENST00000504669 AATFQ9NY61 560 aaKnown RBP eCLIP11.69□□□□□ -0.54
ITGA1-203ENST00000504669 TDRD12Q587J7 1177 aaKnown RBP11.69□□□□□ -0.54
ITGA1-203ENST00000504669 SYCP3Q8IZU3 236 aa11.69□□□□□ -0.54
ITGA1-203ENST00000504669 DIABLOQ9NR28 239 aa11.69□□□□□ -0.54
ITGA1-203ENST00000504669 WDHD1O75717 1129 aaPredicted RBP11.69□□□□□ -0.54
ITGA1-203ENST00000504669 DBNLQ9UJU6 430 aaKnown RBP11.69□□□□□ -0.54
ITGA1-203ENST00000504669 CALCOCO2Q13137 446 aa11.68□□□□□ -0.54
ITGA1-203ENST00000504669 ZBTB10Q96DT7 871 aa11.68□□□□□ -0.54
ITGA1-203ENST00000504669 FAM204AQ9H8W3 233 aa11.68□□□□□ -0.54
ITGA1-203ENST00000504669 PRPHP41219 470 aa11.68□□□□□ -0.54
ITGA1-203ENST00000504669 TRIM60Q495X7 471 aa11.68□□□□□ -0.54
ITGA1-203ENST00000504669 CCDC122Q5T0U0 273 aa11.68□□□□□ -0.54
ITGA1-203ENST00000504669 USP48Q86UV5 1035 aa11.68□□□□□ -0.54
ITGA1-203ENST00000504669 MPHOSPH6Q99547 160 aaKnown RBP11.68□□□□□ -0.54
ITGA1-203ENST00000504669 BICC1Q9H694 974 aaKnown RBP11.68□□□□□ -0.54
ITGA1-203ENST00000504669 ANGPTL3Q9Y5C1 460 aa11.68□□□□□ -0.54
ITGA1-203ENST00000504669 INPP1P49441 399 aa11.68□□□□□ -0.54
ITGA1-203ENST00000504669 PPP1R14BQ96C90 147 aa11.68□□□□□ -0.54
ITGA1-203ENST00000504669 SAMM50Q9Y512 469 aa11.68□□□□□ -0.54
ITGA1-203ENST00000504669 HGSO14964 777 aaPredicted RBP11.68□□□□□ -0.54
ITGA1-203ENST00000504669 MCF2LO15068 1137 aa11.68□□□□□ -0.54
ITGA1-203ENST00000504669 FGFR1OPO95684 399 aaKnown RBP11.68□□□□□ -0.54
ITGA1-203ENST00000504669 EEF1DP29692 281 aaKnown RBP11.68□□□□□ -0.54
ITGA1-203ENST00000504669 CYLC1P35663 651 aaPredicted RBP11.68□□□□□ -0.54
ITGA1-203ENST00000504669 NAPGQ99747 312 aaPredicted RBP11.68□□□□□ -0.54
ITGA1-203ENST00000504669 PDE11AQ9HCR9 933 aa11.68□□□□□ -0.54
ITGA1-203ENST00000504669 LZTFL1Q9NQ48 299 aa11.68□□□□□ -0.54
ITGA1-203ENST00000504669 BRD4O60885 1362 aaPredicted RBP11.67□□□□□ -0.54
ITGA1-203ENST00000504669 SKIP12755 728 aa11.67□□□□□ -0.54
ITGA1-203ENST00000504669 IFT88Q13099 833 aa11.67□□□□□ -0.54
ITGA1-203ENST00000504669 UBA5Q9GZZ9 404 aa11.67□□□□□ -0.54
ITGA1-203ENST00000504669 TMA7Q9Y2S6 64 aaKnown RBP11.67□□□□□ -0.54
ITGA1-203ENST00000504669 WDR46O15213 610 aaKnown RBP11.67□□□□□ -0.54
ITGA1-203ENST00000504669 SYF2O95926 243 aaKnown RBP11.67□□□□□ -0.54
ITGA1-203ENST00000504669 MAP3K21Q5TCX8 1036 aa11.67□□□□□ -0.54
ITGA1-203ENST00000504669 NANOGNBQ7Z5D8 188 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms