RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 HELBQ8NG08 1087 aaPredicted RBP26.42■■□□□ 1.82
PTPN13-205ENST00000502971 AKT1S1Q96B36 256 aa26.42■■□□□ 1.82
PTPN13-205ENST00000502971 NLRP3Q96P20 1036 aa26.42■■□□□ 1.82
PTPN13-205ENST00000502971 ARID4AP29374 1257 aaPredicted RBP26.41■■□□□ 1.82
PTPN13-205ENST00000502971 SCARF1Q14162 830 aa26.41■■□□□ 1.82
PTPN13-205ENST00000502971 CCDC102BQ68D86 513 aa26.41■■□□□ 1.82
PTPN13-205ENST00000502971 C3orf67Q6ZVT6 689 aa26.41■■□□□ 1.82
PTPN13-205ENST00000502971 ZAP70P43403 619 aa26.4■■□□□ 1.82
PTPN13-205ENST00000502971 UPF3BQ9BZI7 483 aaKnown RBP26.4■■□□□ 1.82
PTPN13-205ENST00000502971 HMG20BQ9P0W2 317 aa26.4■■□□□ 1.82
PTPN13-205ENST00000502971 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.39■■□□□ 1.82
PTPN13-205ENST00000502971 MCAMP43121 646 aa26.39■■□□□ 1.82
PTPN13-205ENST00000502971 TTF1Q15361 905 aaPredicted RBP26.39■■□□□ 1.82
PTPN13-205ENST00000502971 FLAD1Q8NFF5 587 aa26.39■■□□□ 1.82
PTPN13-205ENST00000502971 BSDC1Q9NW68 430 aaPredicted RBP26.39■■□□□ 1.82
PTPN13-205ENST00000502971 CARMIL3Q8ND23 1372 aa26.39■■□□□ 1.82
PTPN13-205ENST00000502971 SLC27A2O14975 620 aa26.39■■□□□ 1.81
PTPN13-205ENST00000502971 CHRNDQ07001 517 aa26.39■■□□□ 1.81
PTPN13-205ENST00000502971 U3KPZ7 1027 aaPredicted RBP26.39■■□□□ 1.81
PTPN13-205ENST00000502971 SEC62Q99442 399 aaKnown RBP26.38■■□□□ 1.81
PTPN13-205ENST00000502971 CWC22Q9HCG8 908 aaKnown RBP26.38■■□□□ 1.81
PTPN13-205ENST00000502971 TFCP2L1Q9NZI6 479 aa26.38■■□□□ 1.81
PTPN13-205ENST00000502971 CHGBP05060 677 aa26.37■■□□□ 1.81
PTPN13-205ENST00000502971 PHKA1P46020 1223 aa26.37■■□□□ 1.81
PTPN13-205ENST00000502971 TSGA10IPQ3SY00 556 aa26.37■■□□□ 1.81
PTPN13-205ENST00000502971 TMX3Q96JJ7 454 aa26.37■■□□□ 1.81
PTPN13-205ENST00000502971 FOXD4L1Q9NU39 408 aa26.37■■□□□ 1.81
PTPN13-205ENST00000502971 CCDC129Q6ZRS4 1044 aa26.36■■□□□ 1.81
PTPN13-205ENST00000502971 TTC14Q96N46 770 aa26.36■■□□□ 1.81
PTPN13-205ENST00000502971 ZSWIM6Q9HCJ5 1215 aa26.36■■□□□ 1.81
PTPN13-205ENST00000502971 AKAP11Q9UKA4 1901 aa26.36■■□□□ 1.81
PTPN13-205ENST00000502971 CASTP20810 708 aaKnown RBP26.36■■□□□ 1.81
PTPN13-205ENST00000502971 PSMA5P28066 241 aa26.36■■□□□ 1.81
PTPN13-205ENST00000502971 NFIXQ14938 502 aa26.36■■□□□ 1.81
PTPN13-205ENST00000502971 ZSCAN25Q6NSZ9 544 aa26.36■■□□□ 1.81
PTPN13-205ENST00000502971 DEFB132Q7Z7B7 95 aa26.36■■□□□ 1.81
PTPN13-205ENST00000502971 UPF1Q92900 1129 aaKnown RBP eCLIP26.36■■□□□ 1.81
PTPN13-205ENST00000502971 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.36■■□□□ 1.81
PTPN13-205ENST00000502971 ZNF827Q17R98 1081 aa26.35■■□□□ 1.81
PTPN13-205ENST00000502971 JAKMIP1Q96N16 626 aaKnown RBP26.35■■□□□ 1.81
PTPN13-205ENST00000502971 DSCC1Q9BVC3 393 aa26.35■■□□□ 1.81
PTPN13-205ENST00000502971 CUL4AQ13619 759 aa26.34■■□□□ 1.81
PTPN13-205ENST00000502971 CYP46A1Q9Y6A2 500 aa26.34■■□□□ 1.81
PTPN13-205ENST00000502971 MAST3O60307 1309 aa26.34■■□□□ 1.81
PTPN13-205ENST00000502971 COL4A1P02462 1669 aa26.34■■□□□ 1.81
PTPN13-205ENST00000502971 FRAT2O75474 233 aaPredicted RBP26.34■■□□□ 1.81
PTPN13-205ENST00000502971 ADCK5Q3MIX3 580 aa26.34■■□□□ 1.81
PTPN13-205ENST00000502971 VPS53Q5VIR6 699 aa26.34■■□□□ 1.81
PTPN13-205ENST00000502971 RPAP1Q9BWH6 1393 aaPredicted RBP26.33■■□□□ 1.81
PTPN13-205ENST00000502971 NPHP1O15259 732 aa26.33■■□□□ 1.81
PTPN13-205ENST00000502971 CYP2E1P05181 493 aaPredicted RBP26.33■■□□□ 1.81
PTPN13-205ENST00000502971 KRT32Q14532 448 aa26.33■■□□□ 1.81
PTPN13-205ENST00000502971 PI16Q6UXB8 463 aa26.33■■□□□ 1.81
PTPN13-205ENST00000502971 GYS1P13807 737 aa26.32■■□□□ 1.8
PTPN13-205ENST00000502971 RPS8P62241 208 aaKnown RBP26.32■■□□□ 1.8
PTPN13-205ENST00000502971 UBE4AQ14139 1066 aa26.32■■□□□ 1.8
PTPN13-205ENST00000502971 RUFY3Q7L099 469 aa26.32■■□□□ 1.8
PTPN13-205ENST00000502971 APPBP2Q92624 585 aa26.32■■□□□ 1.8
PTPN13-205ENST00000502971 CELF1Q92879 486 aaKnown RBP26.32■■□□□ 1.8
PTPN13-205ENST00000502971 INTS4Q96HW7 963 aaKnown RBP26.32■■□□□ 1.8
PTPN13-205ENST00000502971 STK32BQ9NY57 414 aa26.32■■□□□ 1.8
PTPN13-205ENST00000502971 RAB3GAP1Q15042 981 aa26.31■■□□□ 1.8
PTPN13-205ENST00000502971 SLC15A2Q16348 729 aa26.31■■□□□ 1.8
PTPN13-205ENST00000502971 SLFNL1Q499Z3 407 aa26.31■■□□□ 1.8
PTPN13-205ENST00000502971 PDRG1Q9NUG6 133 aa26.31■■□□□ 1.8
PTPN13-205ENST00000502971 MINPP1Q9UNW1 487 aa26.31■■□□□ 1.8
PTPN13-205ENST00000502971 CNBD1Q8NA66 436 aa26.31■■□□□ 1.8
PTPN13-205ENST00000502971 SPATA5Q8NB90 893 aa26.31■■□□□ 1.8
PTPN13-205ENST00000502971 OSBP2Q969R2 916 aa26.31■■□□□ 1.8
PTPN13-205ENST00000502971 M0R2C6 588 aa26.3■■□□□ 1.8
PTPN13-205ENST00000502971 AK2P54819 239 aa26.3■■□□□ 1.8
PTPN13-205ENST00000502971 WASHC4Q2M389 1173 aa26.3■■□□□ 1.8
PTPN13-205ENST00000502971 LIMCH1Q9UPQ0 1083 aa26.3■■□□□ 1.8
PTPN13-205ENST00000502971 A0A1B0GUL6 1792 aa26.3■■□□□ 1.8
PTPN13-205ENST00000502971 MYH7P12883 1935 aa26.29■■□□□ 1.8
PTPN13-205ENST00000502971 SNAP23O00161 211 aa26.29■■□□□ 1.8
PTPN13-205ENST00000502971 PIH1D3Q9NQM4 214 aaKnown RBP26.29■■□□□ 1.8
PTPN13-205ENST00000502971 HSPD1P10809 573 aaKnown RBP26.28■■□□□ 1.8
PTPN13-205ENST00000502971 TM4SF1P30408 202 aa26.28■■□□□ 1.8
PTPN13-205ENST00000502971 ADD2P35612 726 aa26.28■■□□□ 1.8
PTPN13-205ENST00000502971 NUCB2P80303 420 aa26.28■■□□□ 1.8
PTPN13-205ENST00000502971 RASGRF1Q13972 1273 aa26.28■■□□□ 1.8
PTPN13-205ENST00000502971 UBE3CQ15386 1083 aa26.28■■□□□ 1.8
PTPN13-205ENST00000502971 BLOC1S2Q6QNY1 142 aa26.28■■□□□ 1.8
PTPN13-205ENST00000502971 NOL8Q76FK4 1167 aaKnown RBP26.28■■□□□ 1.8
PTPN13-205ENST00000502971 ANKRD2Q9GZV1 360 aa26.28■■□□□ 1.8
PTPN13-205ENST00000502971 ALDH8A1Q9H2A2 487 aaPredicted RBP26.28■■□□□ 1.8
PTPN13-205ENST00000502971 BCAMP50895 628 aa26.27■■□□□ 1.8
PTPN13-205ENST00000502971 CCDC24Q8N4L8 307 aa26.27■■□□□ 1.8
PTPN13-205ENST00000502971 ZGPATQ8N5A5 531 aaKnown RBP26.27■■□□□ 1.8
PTPN13-205ENST00000502971 CPA1P15085 419 aa26.26■■□□□ 1.79
PTPN13-205ENST00000502971 TAF1P21675 1872 aa26.26■■□□□ 1.79
PTPN13-205ENST00000502971 ANO8Q9HCE9 1232 aaPredicted RBP26.26■■□□□ 1.79
PTPN13-205ENST00000502971 TNRC6CQ9HCJ0 1690 aaKnown RBP26.26■■□□□ 1.79
PTPN13-205ENST00000502971 SLC9C2Q5TAH2 1124 aa26.25■■□□□ 1.79
PTPN13-205ENST00000502971 PRR5LQ6MZQ0 368 aa26.25■■□□□ 1.79
PTPN13-205ENST00000502971 COL23A1Q86Y22 540 aaPredicted RBP26.25■■□□□ 1.79
PTPN13-205ENST00000502971 ZSCAN31Q96LW9 406 aaPredicted RBP26.25■■□□□ 1.79
PTPN13-205ENST00000502971 GNL3LQ9NVN8 582 aaKnown RBP26.25■■□□□ 1.79
PTPN13-205ENST00000502971 ZNF804BA4D1E1 1349 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms