RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 DDX56Q9NY93 547 aaKnown RBP4.57□□□□□ -1.68
SMC6-208ENST00000481708 PCDHGA11Q9Y5H2 935 aa4.57□□□□□ -1.68
SMC6-208ENST00000481708 BTAF1O14981 1849 aa4.57□□□□□ -1.68
SMC6-208ENST00000481708 JCADQ9P266 1359 aa4.57□□□□□ -1.68
SMC6-208ENST00000481708 A0A0U1RQG5 324 aaPredicted RBP4.57□□□□□ -1.68
SMC6-208ENST00000481708 MPSTP25325 297 aa4.57□□□□□ -1.68
SMC6-208ENST00000481708 NME8Q8N427 588 aa4.57□□□□□ -1.68
SMC6-208ENST00000481708 TPCN2Q8NHX9 752 aa4.57□□□□□ -1.68
SMC6-208ENST00000481708 SLC6A16Q9GZN6 736 aa4.57□□□□□ -1.68
SMC6-208ENST00000481708 METTL14Q9HCE5 456 aaKnown RBP4.57□□□□□ -1.68
SMC6-208ENST00000481708 STAU1O95793 577 aaKnown RBP4.56□□□□□ -1.68
SMC6-208ENST00000481708 PAX3P23760 479 aa4.56□□□□□ -1.68
SMC6-208ENST00000481708 FILIP1Q7Z7B0 1213 aa4.56□□□□□ -1.68
SMC6-208ENST00000481708 BAP1Q92560 729 aa4.56□□□□□ -1.68
SMC6-208ENST00000481708 FOXJ1Q92949 421 aa4.56□□□□□ -1.68
SMC6-208ENST00000481708 TSR2Q969E8 191 aaKnown RBP4.56□□□□□ -1.68
SMC6-208ENST00000481708 ARHGAP9Q9BRR9 750 aa4.56□□□□□ -1.68
SMC6-208ENST00000481708 CARD14Q9BXL6 1004 aa4.56□□□□□ -1.68
SMC6-208ENST00000481708 CCSER2Q9H7U1 834 aa4.56□□□□□ -1.68
SMC6-208ENST00000481708 LDHBP07195 334 aaKnown RBP4.56□□□□□ -1.68
SMC6-208ENST00000481708 TEX2Q8IWB9 1127 aa4.56□□□□□ -1.68
SMC6-208ENST00000481708 ARMC2Q8NEN0 867 aa4.56□□□□□ -1.68
SMC6-208ENST00000481708 CCDC136Q96JN2 1154 aa4.56□□□□□ -1.68
SMC6-208ENST00000481708 METTL5Q9NRN9 209 aaKnown RBP4.56□□□□□ -1.68
SMC6-208ENST00000481708 DNAAF2Q9NVR5 837 aaKnown RBP4.56□□□□□ -1.68
SMC6-208ENST00000481708 FCF1Q9Y324 198 aaKnown RBP4.56□□□□□ -1.68
SMC6-208ENST00000481708 PAPPA2Q9BXP8 1791 aa4.56□□□□□ -1.68
SMC6-208ENST00000481708 ITGB4P16144 1822 aa4.56□□□□□ -1.68
SMC6-208ENST00000481708 C10orf71Q711Q0 1435 aa4.56□□□□□ -1.68
SMC6-208ENST00000481708 CENPBP07199 599 aaPredicted RBP4.56□□□□□ -1.68
SMC6-208ENST00000481708 POU3F3P20264 500 aaPredicted RBP4.56□□□□□ -1.68
SMC6-208ENST00000481708 HSD3B2P26439 372 aa4.56□□□□□ -1.68
SMC6-208ENST00000481708 ZNF76P36508 570 aa4.56□□□□□ -1.68
SMC6-208ENST00000481708 LINC01559Q495D7 138 aa4.56□□□□□ -1.68
SMC6-208ENST00000481708 IL21Q9HBE4 155 aa4.56□□□□□ -1.68
SMC6-208ENST00000481708 PCDH10Q9P2E7 1040 aa4.56□□□□□ -1.68
SMC6-208ENST00000481708 MAGEB6P1A0A0J9YX57 407 aa4.55□□□□□ -1.68
SMC6-208ENST00000481708 ENPP3O14638 875 aa4.55□□□□□ -1.68
SMC6-208ENST00000481708 ZBTB39O15060 712 aa4.55□□□□□ -1.68
SMC6-208ENST00000481708 MAPK8P45983 427 aa4.55□□□□□ -1.68
SMC6-208ENST00000481708 IER2Q9BTL4 223 aa4.55□□□□□ -1.68
SMC6-208ENST00000481708 SOS2Q07890 1332 aaPredicted RBP4.55□□□□□ -1.68
SMC6-208ENST00000481708 BRD4O60885 1362 aaPredicted RBP4.55□□□□□ -1.68
SMC6-208ENST00000481708 FAM221BA6H8Z2 402 aa4.55□□□□□ -1.68
SMC6-208ENST00000481708 PRPF40AO75400 957 aaKnown RBP4.55□□□□□ -1.68
SMC6-208ENST00000481708 PDE3BQ13370 1112 aa4.55□□□□□ -1.68
SMC6-208ENST00000481708 ERFEQ4G0M1 354 aa4.55□□□□□ -1.68
SMC6-208ENST00000481708 RNF135Q8IUD6 432 aa4.55□□□□□ -1.68
SMC6-208ENST00000481708 PPEF1O14829 653 aaPredicted RBP4.55□□□□□ -1.68
SMC6-208ENST00000481708 SORBS3O60504 671 aa4.55□□□□□ -1.68
SMC6-208ENST00000481708 FMNL3Q8IVF7 1028 aa4.55□□□□□ -1.68
SMC6-208ENST00000481708 CDAN1Q8IWY9 1227 aa4.55□□□□□ -1.68
SMC6-208ENST00000481708 ZNF511Q8NB15 262 aa4.55□□□□□ -1.68
SMC6-208ENST00000481708 HELQQ8TDG4 1101 aa4.55□□□□□ -1.68
SMC6-208ENST00000481708 RPS6KL1Q9Y6S9 549 aa4.55□□□□□ -1.68
SMC6-208ENST00000481708 ZNF335Q9H4Z2 1342 aaPredicted RBP4.55□□□□□ -1.68
SMC6-208ENST00000481708 PLA2G2CQ5R387 149 aa4.54□□□□□ -1.68
SMC6-208ENST00000481708 ZSCAN29Q8IWY8 852 aaPredicted RBP4.54□□□□□ -1.68
SMC6-208ENST00000481708 FAM129BQ96TA1 746 aa4.54□□□□□ -1.68
SMC6-208ENST00000481708 WDR90Q96KV7 1748 aa4.54□□□□□ -1.68
SMC6-208ENST00000481708 GIGYF1O75420 1035 aaPredicted RBP4.54□□□□□ -1.68
SMC6-208ENST00000481708 GJA8P48165 433 aa4.54□□□□□ -1.68
SMC6-208ENST00000481708 NAIPQ13075 1403 aa4.54□□□□□ -1.68
SMC6-208ENST00000481708 TJP1Q07157 1748 aa4.54□□□□□ -1.68
SMC6-208ENST00000481708 MZF1P28698 734 aaPredicted RBP4.54□□□□□ -1.68
SMC6-208ENST00000481708 MCCD1P59942 119 aaPredicted RBP4.54□□□□□ -1.68
SMC6-208ENST00000481708 CCDC102BQ68D86 513 aa4.54□□□□□ -1.68
SMC6-208ENST00000481708 ZBTB33Q86T24 672 aa4.54□□□□□ -1.68
SMC6-208ENST00000481708 ATCAYQ86WG3 371 aa4.54□□□□□ -1.68
SMC6-208ENST00000481708 SBNO1A3KN83 1393 aa4.54□□□□□ -1.68
SMC6-208ENST00000481708 ATF4P18848 351 aaPredicted RBP4.53□□□□□ -1.68
SMC6-208ENST00000481708 GORABQ5T7V8 394 aa4.53□□□□□ -1.68
SMC6-208ENST00000481708 SPOCK3Q9BQ16 436 aa4.53□□□□□ -1.68
SMC6-208ENST00000481708 C12orf49Q9H741 205 aa4.53□□□□□ -1.68
SMC6-208ENST00000481708 SH3BP2P78314 561 aa4.53□□□□□ -1.68
SMC6-208ENST00000481708 RASA3Q14644 834 aa4.53□□□□□ -1.68
SMC6-208ENST00000481708 RIMS2Q9UQ26 1411 aa4.53□□□□□ -1.68
SMC6-208ENST00000481708 INPP5FQ9Y2H2 1132 aa4.53□□□□□ -1.68
SMC6-208ENST00000481708 PARD3Q8TEW0 1356 aa4.53□□□□□ -1.68
SMC6-208ENST00000481708 CREB3O43889 395 aa4.53□□□□□ -1.68
SMC6-208ENST00000481708 KCNA6P17658 529 aa4.53□□□□□ -1.68
SMC6-208ENST00000481708 MAP9Q49MG5 647 aa4.53□□□□□ -1.68
SMC6-208ENST00000481708 POTEGQ6S5H5 508 aa4.53□□□□□ -1.68
SMC6-208ENST00000481708 SMC5Q8IY18 1101 aa4.53□□□□□ -1.68
SMC6-208ENST00000481708 BRINP2Q9C0B6 783 aa4.53□□□□□ -1.68
SMC6-208ENST00000481708 K7ELQ4 463 aaPredicted RBP4.52□□□□□ -1.69
SMC6-208ENST00000481708 XRCC5P13010 732 aaKnown RBP4.52□□□□□ -1.69
SMC6-208ENST00000481708 FAM50AQ14320 339 aaKnown RBP4.52□□□□□ -1.69
SMC6-208ENST00000481708 ZNF408Q9H9D4 720 aa4.52□□□□□ -1.69
SMC6-208ENST00000481708 COPRSQ9NQ92 184 aa4.52□□□□□ -1.69
SMC6-208ENST00000481708 ESPNB1AK53 854 aa4.52□□□□□ -1.69
SMC6-208ENST00000481708 GTF2IP78347 998 aa4.52□□□□□ -1.69
SMC6-208ENST00000481708 DZIP3Q86Y13 1208 aaKnown RBP4.52□□□□□ -1.69
SMC6-208ENST00000481708 PGBD3Q8N328 593 aa4.52□□□□□ -1.69
SMC6-208ENST00000481708 C1QTNF2Q9BXJ5 285 aa4.52□□□□□ -1.69
SMC6-208ENST00000481708 VTI1BQ9UEU0 232 aa4.52□□□□□ -1.69
SMC6-208ENST00000481708 PDGFRBP09619 1106 aa4.52□□□□□ -1.69
SMC6-208ENST00000481708 CDKN1CP49918 316 aaPredicted RBP4.52□□□□□ -1.69
SMC6-208ENST00000481708 SEC13P55735 322 aa4.52□□□□□ -1.69
SMC6-208ENST00000481708 RHBDL3P58872 404 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms