RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 SEC62Q99442 399 aaKnown RBP10.11□□□□□ -0.79
GTF3A-206ENST00000470606 FSD1Q9BTV5 496 aa10.11□□□□□ -0.79
GTF3A-206ENST00000470606 STK32BQ9NY57 414 aa10.11□□□□□ -0.79
GTF3A-206ENST00000470606 PALD1Q9ULE6 856 aa10.11□□□□□ -0.79
GTF3A-206ENST00000470606 CD2BP2O95400 341 aaKnown RBP10.1□□□□□ -0.79
GTF3A-206ENST00000470606 CYP2E1P05181 493 aaPredicted RBP10.1□□□□□ -0.79
GTF3A-206ENST00000470606 HOXA10P31260 410 aaPredicted RBP10.1□□□□□ -0.79
GTF3A-206ENST00000470606 ST5P78524 1137 aa10.1□□□□□ -0.79
GTF3A-206ENST00000470606 RASGRF1Q13972 1273 aa10.1□□□□□ -0.79
GTF3A-206ENST00000470606 CCDC158Q5M9N0 1113 aa10.1□□□□□ -0.79
GTF3A-206ENST00000470606 TTC39AQ5SRH9 613 aa10.1□□□□□ -0.79
GTF3A-206ENST00000470606 GORABQ5T7V8 394 aa10.1□□□□□ -0.79
GTF3A-206ENST00000470606 ZNF512BQ96KM6 892 aaPredicted RBP10.1□□□□□ -0.79
GTF3A-206ENST00000470606 COL1A1P02452 1464 aaPredicted RBP10.1□□□□□ -0.79
GTF3A-206ENST00000470606 MED23Q9ULK4 1368 aa10.1□□□□□ -0.79
GTF3A-206ENST00000470606 ZNF804BA4D1E1 1349 aa10.1□□□□□ -0.79
GTF3A-206ENST00000470606 LTBP1Q14766 1721 aa10.09□□□□□ -0.79
GTF3A-206ENST00000470606 REC8O95072 547 aa10.09□□□□□ -0.79
GTF3A-206ENST00000470606 GYG1P46976 350 aa10.09□□□□□ -0.79
GTF3A-206ENST00000470606 SF3B2Q13435 895 aaKnown RBP10.09□□□□□ -0.79
GTF3A-206ENST00000470606 ANO2Q9NQ90 1003 aa10.09□□□□□ -0.79
GTF3A-206ENST00000470606 PIH1D3Q9NQM4 214 aaKnown RBP10.09□□□□□ -0.79
GTF3A-206ENST00000470606 DIAPH3Q9NSV4 1193 aa10.09□□□□□ -0.79
GTF3A-206ENST00000470606 HMG20BQ9P0W2 317 aa10.09□□□□□ -0.79
GTF3A-206ENST00000470606 CACNA1SQ13698 1873 aa10.09□□□□□ -0.79
GTF3A-206ENST00000470606 DOCK2Q92608 1830 aa10.09□□□□□ -0.79
GTF3A-206ENST00000470606 SRGNP10124 158 aa10.09□□□□□ -0.79
GTF3A-206ENST00000470606 SLC5A1P13866 664 aa10.09□□□□□ -0.79
GTF3A-206ENST00000470606 OLFM4Q6UX06 510 aa10.09□□□□□ -0.79
GTF3A-206ENST00000470606 CCDC129Q6ZRS4 1044 aa10.09□□□□□ -0.79
GTF3A-206ENST00000470606 FAM84BQ96KN1 310 aaPredicted RBP10.09□□□□□ -0.79
GTF3A-206ENST00000470606 BRIP1Q9BX63 1249 aa10.09□□□□□ -0.79
GTF3A-206ENST00000470606 IQSEC3Q9UPP2 1182 aaPredicted RBP10.09□□□□□ -0.79
GTF3A-206ENST00000470606 LRRC37AA6NMS7 1700 aa10.08□□□□□ -0.8
GTF3A-206ENST00000470606 COL9A3Q14050 684 aaPredicted RBP10.08□□□□□ -0.8
GTF3A-206ENST00000470606 UBE4AQ14139 1066 aa10.08□□□□□ -0.8
GTF3A-206ENST00000470606 RPGRQ92834 1020 aaKnown RBP10.08□□□□□ -0.8
GTF3A-206ENST00000470606 GPR101Q96P66 508 aaPredicted RBP10.08□□□□□ -0.8
GTF3A-206ENST00000470606 RAD50Q92878 1312 aa10.08□□□□□ -0.8
GTF3A-206ENST00000470606 RASEFQ8IZ41 740 aa10.07□□□□□ -0.8
GTF3A-206ENST00000470606 TBC1D2Q9BYX2 928 aa10.07□□□□□ -0.8
GTF3A-206ENST00000470606 PARP3Q9Y6F1 533 aa10.07□□□□□ -0.8
GTF3A-206ENST00000470606 SLX4Q8IY92 1834 aa10.07□□□□□ -0.8
GTF3A-206ENST00000470606 CHD4Q14839 1912 aa10.07□□□□□ -0.8
GTF3A-206ENST00000470606 RFX7Q2KHR2 1363 aa10.07□□□□□ -0.8
GTF3A-206ENST00000470606 MYH13Q9UKX3 1938 aa10.07□□□□□ -0.8
GTF3A-206ENST00000470606 FOXP2O15409 715 aa10.07□□□□□ -0.8
GTF3A-206ENST00000470606 HSPA4P34932 840 aa10.07□□□□□ -0.8
GTF3A-206ENST00000470606 GPSM2P81274 684 aa10.07□□□□□ -0.8
GTF3A-206ENST00000470606 ZMYM1Q5SVZ6 1142 aa10.07□□□□□ -0.8
GTF3A-206ENST00000470606 FBXO33Q7Z6M2 555 aa10.07□□□□□ -0.8
GTF3A-206ENST00000470606 SPATA5Q8NB90 893 aa10.07□□□□□ -0.8
GTF3A-206ENST00000470606 OSBP2Q969R2 916 aa10.07□□□□□ -0.8
GTF3A-206ENST00000470606 CRAMP1Q96RY5 1269 aa10.07□□□□□ -0.8
GTF3A-206ENST00000470606 TAF6LQ9Y6J9 622 aa10.07□□□□□ -0.8
GTF3A-206ENST00000470606 VPS53Q5VIR6 699 aa10.06□□□□□ -0.8
GTF3A-206ENST00000470606 DUOX1Q9NRD9 1551 aa10.06□□□□□ -0.8
GTF3A-206ENST00000470606 MAST3O60307 1309 aa10.06□□□□□ -0.8
GTF3A-206ENST00000470606 CCDC171Q6TFL3 1326 aa10.06□□□□□ -0.8
GTF3A-206ENST00000470606 M0R2C6 588 aa10.05□□□□□ -0.8
GTF3A-206ENST00000470606 HIP1O00291 1037 aa10.05□□□□□ -0.8
GTF3A-206ENST00000470606 RNF113AO15541 343 aaKnown RBP10.05□□□□□ -0.8
GTF3A-206ENST00000470606 UQCRFS1P1P0C7P4 283 aa10.05□□□□□ -0.8
GTF3A-206ENST00000470606 CCDC125Q86Z20 511 aa10.05□□□□□ -0.8
GTF3A-206ENST00000470606 MAP4K1Q92918 833 aa10.05□□□□□ -0.8
GTF3A-206ENST00000470606 IL17RAQ96F46 866 aa10.05□□□□□ -0.8
GTF3A-206ENST00000470606 RBM17Q96I25 401 aaKnown RBP10.05□□□□□ -0.8
GTF3A-206ENST00000470606 ANKRD2Q9GZV1 360 aa10.05□□□□□ -0.8
GTF3A-206ENST00000470606 PUS7LQ9H0K6 701 aaKnown RBP10.05□□□□□ -0.8
GTF3A-206ENST00000470606 WWC3Q9ULE0 1092 aa10.05□□□□□ -0.8
GTF3A-206ENST00000470606 A0A0G2JLW4 131 aa10.05□□□□□ -0.8
GTF3A-206ENST00000470606 TCRBV5S4A2TA0A5A2 114 aa10.05□□□□□ -0.8
GTF3A-206ENST00000470606 BBOX1O75936 387 aa10.05□□□□□ -0.8
GTF3A-206ENST00000470606 CHRNA5P30532 468 aa10.05□□□□□ -0.8
GTF3A-206ENST00000470606 NECTIN1Q15223 517 aa10.05□□□□□ -0.8
GTF3A-206ENST00000470606 MCMDC2Q4G0Z9 681 aa10.05□□□□□ -0.8
GTF3A-206ENST00000470606 ZNF384Q8TF68 577 aa10.05□□□□□ -0.8
GTF3A-206ENST00000470606 RUFY2Q8WXA3 655 aa10.05□□□□□ -0.8
GTF3A-206ENST00000470606 UPF1Q92900 1129 aaKnown RBP eCLIP10.05□□□□□ -0.8
GTF3A-206ENST00000470606 POLLQ9UGP5 575 aa10.05□□□□□ -0.8
GTF3A-206ENST00000470606 XDHP47989 1333 aa10.04□□□□□ -0.8
GTF3A-206ENST00000470606 NPR1P16066 1061 aa10.04□□□□□ -0.8
GTF3A-206ENST00000470606 ANKIB1Q9P2G1 1089 aa10.04□□□□□ -0.8
GTF3A-206ENST00000470606 NSFL1CQ9UNZ2 370 aaKnown RBP10.04□□□□□ -0.8
GTF3A-206ENST00000470606 EPB41L2O43491 1005 aaKnown RBP10.03□□□□□ -0.8
GTF3A-206ENST00000470606 IDH1O75874 414 aaKnown RBP10.03□□□□□ -0.8
GTF3A-206ENST00000470606 PDE6AP16499 860 aa10.03□□□□□ -0.8
GTF3A-206ENST00000470606 ADD2P35612 726 aa10.03□□□□□ -0.8
GTF3A-206ENST00000470606 PDE6BP35913 854 aa10.03□□□□□ -0.8
GTF3A-206ENST00000470606 ADCK5Q3MIX3 580 aa10.03□□□□□ -0.8
GTF3A-206ENST00000470606 KCNB2Q92953 911 aa10.03□□□□□ -0.8
GTF3A-206ENST00000470606 DDRGK1Q96HY6 314 aa10.03□□□□□ -0.8
GTF3A-206ENST00000470606 RBM8AQ9Y5S9 174 aaKnown RBP10.03□□□□□ -0.8
GTF3A-206ENST00000470606 SNX14Q9Y5W7 946 aa10.03□□□□□ -0.8
GTF3A-206ENST00000470606 PPEF1O14829 653 aaPredicted RBP10.03□□□□□ -0.8
GTF3A-206ENST00000470606 HIBADHP31937 336 aaKnown RBP10.03□□□□□ -0.8
GTF3A-206ENST00000470606 KCNJ4P48050 445 aa10.03□□□□□ -0.8
GTF3A-206ENST00000470606 SLC9C2Q5TAH2 1124 aa10.03□□□□□ -0.8
GTF3A-206ENST00000470606 PRPF40BQ6NWY9 871 aaKnown RBP10.03□□□□□ -0.8
GTF3A-206ENST00000470606 KIAA1211Q6ZU35 1233 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms