RNA–Protein interactions for RNA: ENST00000399353.5

ITSN1-210, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-210ENST00000399353 CCDC172P0C7W6 258 aa17.08■□□□□ 0.33
ITSN1-210ENST00000399353 TXLNAP40222 546 aa17.08■□□□□ 0.33
ITSN1-210ENST00000399353 ST3GAL1Q11201 340 aa17.08■□□□□ 0.33
ITSN1-210ENST00000399353 MCTP2Q6DN12 878 aa17.08■□□□□ 0.33
ITSN1-210ENST00000399353 CCDC129Q6ZRS4 1044 aa17.08■□□□□ 0.33
ITSN1-210ENST00000399353 CNPY4Q8N129 248 aa17.08■□□□□ 0.33
ITSN1-210ENST00000399353 FUT8Q9BYC5 575 aa17.08■□□□□ 0.33
ITSN1-210ENST00000399353 STAP2Q9UGK3 403 aa17.08■□□□□ 0.33
ITSN1-210ENST00000399353 ERBB3P21860 1342 aa17.08■□□□□ 0.33
ITSN1-210ENST00000399353 PIK3R4Q99570 1358 aa17.08■□□□□ 0.33
ITSN1-210ENST00000399353 TMEM232C9JQI7 657 aa17.08■□□□□ 0.32
ITSN1-210ENST00000399353 PPFIBP1Q86W92 1011 aa17.08■□□□□ 0.32
ITSN1-210ENST00000399353 USP44Q9H0E7 712 aa17.08■□□□□ 0.32
ITSN1-210ENST00000399353 YY1AP1Q9H869 796 aa17.08■□□□□ 0.32
ITSN1-210ENST00000399353 SAMM50Q9Y512 469 aa17.08■□□□□ 0.32
ITSN1-210ENST00000399353 CEP83Q9Y592 693 aa17.08■□□□□ 0.32
ITSN1-210ENST00000399353 RPS6KB1P23443 525 aa17.08■□□□□ 0.32
ITSN1-210ENST00000399353 BRD2P25440 801 aaKnown RBP17.08■□□□□ 0.32
ITSN1-210ENST00000399353 KIAA1468Q9P260 1216 aa17.08■□□□□ 0.32
ITSN1-210ENST00000399353 TFRCP02786 760 aaKnown RBP17.07■□□□□ 0.32
ITSN1-210ENST00000399353 C1orf141Q5JVX7 400 aa17.07■□□□□ 0.32
ITSN1-210ENST00000399353 AFAP1L1Q8TED9 768 aa17.07■□□□□ 0.32
ITSN1-210ENST00000399353 ARHGEF5Q12774 1597 aa17.07■□□□□ 0.32
ITSN1-210ENST00000399353 PTPDC1A2A3K4 754 aa17.07■□□□□ 0.32
ITSN1-210ENST00000399353 ATP2C2O75185 946 aa17.07■□□□□ 0.32
ITSN1-210ENST00000399353 MMS22LQ6ZRQ5 1243 aa17.07■□□□□ 0.32
ITSN1-210ENST00000399353 RABGGTAQ92696 567 aa17.07■□□□□ 0.32
ITSN1-210ENST00000399353 DPF2Q92785 391 aa17.07■□□□□ 0.32
ITSN1-210ENST00000399353 SHTN1A0MZ66 631 aa17.07■□□□□ 0.32
ITSN1-210ENST00000399353 CAPZA3Q96KX2 299 aa17.07■□□□□ 0.32
ITSN1-210ENST00000399353 FANCLQ9NW38 375 aa17.07■□□□□ 0.32
ITSN1-210ENST00000399353 PARP3Q9Y6F1 533 aa17.07■□□□□ 0.32
ITSN1-210ENST00000399353 CTAGE15A4D2H0 777 aa17.06■□□□□ 0.32
ITSN1-210ENST00000399353 PI4KAP2A4QPH2 592 aa17.06■□□□□ 0.32
ITSN1-210ENST00000399353 ZEB2O60315 1214 aa17.06■□□□□ 0.32
ITSN1-210ENST00000399353 CTAGE8P0CG41 777 aa17.06■□□□□ 0.32
ITSN1-210ENST00000399353 CTAGE6Q86UF2 777 aa17.06■□□□□ 0.32
ITSN1-210ENST00000399353 CTAGE4Q8IX94 777 aa17.06■□□□□ 0.32
ITSN1-210ENST00000399353 PI4KAP1Q8N8J0 262 aa17.06■□□□□ 0.32
ITSN1-210ENST00000399353 ABTB2Q8N961 1025 aa17.06■□□□□ 0.32
ITSN1-210ENST00000399353 RUFY1Q96T51 708 aa17.06■□□□□ 0.32
ITSN1-210ENST00000399353 SUFUQ9UMX1 484 aa17.06■□□□□ 0.32
ITSN1-210ENST00000399353 NEXNQ0ZGT2 675 aa17.06■□□□□ 0.32
ITSN1-210ENST00000399353 TADA2BQ86TJ2 420 aa17.06■□□□□ 0.32
ITSN1-210ENST00000399353 PI4K2BQ8TCG2 481 aa17.06■□□□□ 0.32
ITSN1-210ENST00000399353 RIN2Q8WYP3 895 aaPredicted RBP17.06■□□□□ 0.32
ITSN1-210ENST00000399353 CYB5RLQ6IPT4 315 aa17.06■□□□□ 0.32
ITSN1-210ENST00000399353 EVI5LQ96CN4 794 aa17.06■□□□□ 0.32
ITSN1-210ENST00000399353 MKRN1Q9UHC7 482 aaKnown RBP17.06■□□□□ 0.32
ITSN1-210ENST00000399353 PCDHA7Q9UN72 937 aa17.06■□□□□ 0.32
ITSN1-210ENST00000399353 SSH2Q76I76 1423 aa17.06■□□□□ 0.32
ITSN1-210ENST00000399353 PHLPP2Q6ZVD8 1323 aa17.05■□□□□ 0.32
ITSN1-210ENST00000399353 EPB41L2O43491 1005 aaKnown RBP17.05■□□□□ 0.32
ITSN1-210ENST00000399353 ATP8B1O43520 1251 aa17.05■□□□□ 0.32
ITSN1-210ENST00000399353 CSB-PGBD3P0DP91 1061 aa17.05■□□□□ 0.32
ITSN1-210ENST00000399353 POLD4Q9HCU8 107 aa17.05■□□□□ 0.32
ITSN1-210ENST00000399353 CAPN7Q9Y6W3 813 aa17.05■□□□□ 0.32
ITSN1-210ENST00000399353 A0A0D9SFI3 127 aa17.05■□□□□ 0.32
ITSN1-210ENST00000399353 INPP5BP32019 993 aa17.05■□□□□ 0.32
ITSN1-210ENST00000399353 MTHFSDQ2M296 383 aaKnown RBP17.05■□□□□ 0.32
ITSN1-210ENST00000399353 OSBPL5Q9H0X9 879 aaPredicted RBP17.05■□□□□ 0.32
ITSN1-210ENST00000399353 SLC24A3Q9HC58 644 aa17.05■□□□□ 0.32
ITSN1-210ENST00000399353 HOOK1Q9UJC3 728 aaKnown RBP17.05■□□□□ 0.32
ITSN1-210ENST00000399353 CCDC151A5D8V7 595 aa17.05■□□□□ 0.32
ITSN1-210ENST00000399353 TRMT44Q8IYL2 757 aaKnown RBP17.05■□□□□ 0.32
ITSN1-210ENST00000399353 TOGARAM2Q6ZUX3 1019 aa17.04■□□□□ 0.32
ITSN1-210ENST00000399353 TICAM2Q86XR7 235 aa17.04■□□□□ 0.32
ITSN1-210ENST00000399353 FAM53CQ9NYF3 392 aa17.04■□□□□ 0.32
ITSN1-210ENST00000399353 GNAT3A8MTJ3 354 aa17.04■□□□□ 0.32
ITSN1-210ENST00000399353 ARHGAP6O43182 974 aa17.04■□□□□ 0.32
ITSN1-210ENST00000399353 ZNF202O95125 648 aa17.04■□□□□ 0.32
ITSN1-210ENST00000399353 MYL6BP14649 208 aa17.04■□□□□ 0.32
ITSN1-210ENST00000399353 MATR3P43243 847 aaKnown RBP eCLIP17.04■□□□□ 0.32
ITSN1-210ENST00000399353 SPECC1Q5M775 1068 aa17.04■□□□□ 0.32
ITSN1-210ENST00000399353 RPAINQ86UA6 219 aa17.04■□□□□ 0.32
ITSN1-210ENST00000399353 GBP3Q9H0R5 595 aa17.04■□□□□ 0.32
ITSN1-210ENST00000399353 TTC21AQ8NDW8 1320 aa17.04■□□□□ 0.32
ITSN1-210ENST00000399353 NEBLO76041 1014 aa17.04■□□□□ 0.32
ITSN1-210ENST00000399353 TUBB4AP04350 444 aa17.04■□□□□ 0.32
ITSN1-210ENST00000399353 RESTQ13127 1097 aa17.04■□□□□ 0.32
ITSN1-210ENST00000399353 CASP8Q14790 479 aa17.04■□□□□ 0.32
ITSN1-210ENST00000399353 TTC41PQ6P2S7 1318 aa17.04■□□□□ 0.32
ITSN1-210ENST00000399353 RNF40O75150 1001 aa17.03■□□□□ 0.32
ITSN1-210ENST00000399353 CCDC93Q567U6 631 aa17.03■□□□□ 0.32
ITSN1-210ENST00000399353 C8orf76Q96K31 380 aa17.03■□□□□ 0.32
ITSN1-210ENST00000399353 SYKP43405 635 aa17.03■□□□□ 0.32
ITSN1-210ENST00000399353 BRD3Q15059 726 aa17.03■□□□□ 0.32
ITSN1-210ENST00000399353 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.03■□□□□ 0.32
ITSN1-210ENST00000399353 CCDC175P0C221 793 aa17.03■□□□□ 0.32
ITSN1-210ENST00000399353 CDR1P51861 262 aa17.03■□□□□ 0.32
ITSN1-210ENST00000399353 BCAS4Q8TDM0 211 aa17.03■□□□□ 0.32
ITSN1-210ENST00000399353 SPTLC2O15270 562 aa17.02■□□□□ 0.32
ITSN1-210ENST00000399353 STX17P56962 302 aa17.02■□□□□ 0.32
ITSN1-210ENST00000399353 MTF1Q14872 753 aa17.02■□□□□ 0.32
ITSN1-210ENST00000399353 KLHDC4Q8TBB5 520 aa17.02■□□□□ 0.32
ITSN1-210ENST00000399353 GJB4Q9NTQ9 266 aa17.02■□□□□ 0.32
ITSN1-210ENST00000399353 AKAP2Q9Y2D5 859 aa17.02■□□□□ 0.32
ITSN1-210ENST00000399353 OTUD6BQ8N6M0 293 aa17.02■□□□□ 0.32
ITSN1-210ENST00000399353 TM6SF1Q9BZW5 370 aa17.02■□□□□ 0.32
ITSN1-210ENST00000399353 MYL5Q02045 173 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms