RNA–Protein interactions for RNA: ENST00000376919.3

SSX1-201, Transcript of SSX family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX1, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1-201ENST00000376919 INSRP06213 1382 aa7.47□□□□□ -1.21
SSX1-201ENST00000376919 NPC1L1Q9UHC9 1359 aa7.47□□□□□ -1.21
SSX1-201ENST00000376919 ZBTB7BO15156 539 aaPredicted RBP7.47□□□□□ -1.21
SSX1-201ENST00000376919 ZBTB24O43167 697 aaPredicted RBP7.47□□□□□ -1.21
SSX1-201ENST00000376919 PDE3BQ13370 1112 aa7.47□□□□□ -1.21
SSX1-201ENST00000376919 RGL4Q8IZJ4 473 aa7.47□□□□□ -1.21
SSX1-201ENST00000376919 GTF3C2Q8WUA4 911 aaPredicted RBP7.47□□□□□ -1.21
SSX1-201ENST00000376919 THRAP3Q9Y2W1 955 aaKnown RBP7.47□□□□□ -1.21
SSX1-201ENST00000376919 ERCC5P28715 1186 aaPredicted RBP7.46□□□□□ -1.22
SSX1-201ENST00000376919 FKBP4Q02790 459 aaKnown RBP eCLIP7.46□□□□□ -1.22
SSX1-201ENST00000376919 HSP90AB2PQ58FF8 381 aa7.46□□□□□ -1.22
SSX1-201ENST00000376919 PLA2G2CQ5R387 149 aa7.46□□□□□ -1.22
SSX1-201ENST00000376919 CCDC102BQ68D86 513 aa7.46□□□□□ -1.22
SSX1-201ENST00000376919 SEPT12Q8IYM1 358 aa7.46□□□□□ -1.22
SSX1-201ENST00000376919 TPCN2Q8NHX9 752 aa7.46□□□□□ -1.22
SSX1-201ENST00000376919 RAPGEF4Q8WZA2 1011 aa7.46□□□□□ -1.22
SSX1-201ENST00000376919 SLC10A4Q96EP9 437 aa7.46□□□□□ -1.22
SSX1-201ENST00000376919 POLKQ9UBT6 870 aa7.46□□□□□ -1.22
SSX1-201ENST00000376919 SMARCA5O60264 1052 aaPredicted RBP7.45□□□□□ -1.22
SSX1-201ENST00000376919 PTCD1O75127 700 aaKnown RBP7.45□□□□□ -1.22
SSX1-201ENST00000376919 IL2RBP14784 551 aa7.45□□□□□ -1.22
SSX1-201ENST00000376919 MTHFSP49914 203 aa7.45□□□□□ -1.22
SSX1-201ENST00000376919 ARHGAP4P98171 946 aa7.45□□□□□ -1.22
SSX1-201ENST00000376919 TRIM32Q13049 653 aa7.45□□□□□ -1.22
SSX1-201ENST00000376919 DDB1Q16531 1140 aa7.45□□□□□ -1.22
SSX1-201ENST00000376919 PPP1R18Q6NYC8 613 aa7.45□□□□□ -1.22
SSX1-201ENST00000376919 TRMT44Q8IYL2 757 aaKnown RBP7.45□□□□□ -1.22
SSX1-201ENST00000376919 USHBP1Q8N6Y0 703 aa7.45□□□□□ -1.22
SSX1-201ENST00000376919 CARD10Q9BWT7 1032 aa7.45□□□□□ -1.22
SSX1-201ENST00000376919 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.45□□□□□ -1.22
SSX1-201ENST00000376919 PPP1R1BQ9UD71 204 aaPredicted RBP7.45□□□□□ -1.22
SSX1-201ENST00000376919 DNMT3AQ9Y6K1 912 aaPredicted RBP7.45□□□□□ -1.22
SSX1-201ENST00000376919 TNS2Q63HR2 1409 aa7.44□□□□□ -1.22
SSX1-201ENST00000376919 RGPD1P0DJD0 1748 aa7.44□□□□□ -1.22
SSX1-201ENST00000376919 SFI1A8K8P3 1242 aa7.44□□□□□ -1.22
SSX1-201ENST00000376919 U2SURPO15042 1029 aaKnown RBP7.44□□□□□ -1.22
SSX1-201ENST00000376919 GIGYF1O75420 1035 aaPredicted RBP7.44□□□□□ -1.22
SSX1-201ENST00000376919 TATP17735 454 aaPredicted RBP7.44□□□□□ -1.22
SSX1-201ENST00000376919 RPIAP49247 311 aa7.44□□□□□ -1.22
SSX1-201ENST00000376919 WNT7BP56706 349 aa7.44□□□□□ -1.22
SSX1-201ENST00000376919 ECM1Q16610 540 aa7.44□□□□□ -1.22
SSX1-201ENST00000376919 TSGA10IPQ3SY00 556 aa7.44□□□□□ -1.22
SSX1-201ENST00000376919 OXLD1Q5BKU9 147 aa7.44□□□□□ -1.22
SSX1-201ENST00000376919 RNF20Q5VTR2 975 aa7.44□□□□□ -1.22
SSX1-201ENST00000376919 KRT27Q7Z3Y8 459 aa7.44□□□□□ -1.22
SSX1-201ENST00000376919 CCDC85AQ96PX6 553 aaPredicted RBP7.44□□□□□ -1.22
SSX1-201ENST00000376919 CDV3Q9UKY7 258 aaKnown RBP7.44□□□□□ -1.22
SSX1-201ENST00000376919 ESPNB1AK53 854 aa7.43□□□□□ -1.22
SSX1-201ENST00000376919 EXOC5O00471 708 aa7.43□□□□□ -1.22
SSX1-201ENST00000376919 SCAMP3O14828 347 aaKnown RBP7.43□□□□□ -1.22
SSX1-201ENST00000376919 ANP32CO43423 234 aa7.43□□□□□ -1.22
SSX1-201ENST00000376919 DIAPH1O60610 1272 aaKnown RBP7.43□□□□□ -1.22
SSX1-201ENST00000376919 SKOR1P84550 965 aa7.43□□□□□ -1.22
SSX1-201ENST00000376919 MRPL58Q14197 206 aaKnown RBP7.43□□□□□ -1.22
SSX1-201ENST00000376919 EIF4A2Q14240 407 aaKnown RBP7.43□□□□□ -1.22
SSX1-201ENST00000376919 RALBP1Q15311 655 aa7.43□□□□□ -1.22
SSX1-201ENST00000376919 NBPF20Q3BBV1 942 aa7.43□□□□□ -1.22
SSX1-201ENST00000376919 SEPT3Q9UH03 358 aa7.43□□□□□ -1.22
SSX1-201ENST00000376919 NUDCQ9Y266 331 aa7.43□□□□□ -1.22
SSX1-201ENST00000376919 DOT1LQ8TEK3 1739 aa7.43□□□□□ -1.22
SSX1-201ENST00000376919 PARD3Q8TEW0 1356 aa7.43□□□□□ -1.22
SSX1-201ENST00000376919 OVOS2A0A0G2JMS6 1433 aa7.43□□□□□ -1.22
SSX1-201ENST00000376919 MEGF6O75095 1541 aa7.42□□□□□ -1.22
SSX1-201ENST00000376919 PKD1L3Q7Z443 1732 aa7.42□□□□□ -1.22
SSX1-201ENST00000376919 NEFMP07197 916 aa7.42□□□□□ -1.22
SSX1-201ENST00000376919 VARSP26640 1264 aaKnown RBP7.42□□□□□ -1.22
SSX1-201ENST00000376919 PPP2R1AP30153 589 aa7.42□□□□□ -1.22
SSX1-201ENST00000376919 NBPF6Q5VWK0 638 aa7.42□□□□□ -1.22
SSX1-201ENST00000376919 DDX54Q8TDD1 881 aaKnown RBP7.42□□□□□ -1.22
SSX1-201ENST00000376919 NBPF4Q96M43 638 aa7.42□□□□□ -1.22
SSX1-201ENST00000376919 MKNK1Q9BUB5 465 aa7.42□□□□□ -1.22
SSX1-201ENST00000376919 BACH2Q9BYV9 841 aa7.42□□□□□ -1.22
SSX1-201ENST00000376919 MYBBP1AQ9BQG0 1328 aaKnown RBP7.42□□□□□ -1.22
SSX1-201ENST00000376919 SHANK3Q9BYB0 1731 aa7.41□□□□□ -1.22
SSX1-201ENST00000376919 M0R2N6 131 aa7.41□□□□□ -1.22
SSX1-201ENST00000376919 WEE1P30291 646 aa7.41□□□□□ -1.22
SSX1-201ENST00000376919 FGD1P98174 961 aa7.41□□□□□ -1.22
SSX1-201ENST00000376919 FAM182BQ5T319 152 aa7.41□□□□□ -1.22
SSX1-201ENST00000376919 HINFPQ9BQA5 517 aa7.41□□□□□ -1.22
SSX1-201ENST00000376919 RBCK1Q9BYM8 510 aa7.41□□□□□ -1.22
SSX1-201ENST00000376919 DISP2A7MBM2 1401 aa7.41□□□□□ -1.22
SSX1-201ENST00000376919 CD2BP2O95400 341 aaKnown RBP7.4□□□□□ -1.22
SSX1-201ENST00000376919 P4HBP07237 508 aaKnown RBP7.4□□□□□ -1.22
SSX1-201ENST00000376919 HMOX1P09601 288 aa7.4□□□□□ -1.22
SSX1-201ENST00000376919 U2AF1L5P0DN76 240 aaPredicted RBP7.4□□□□□ -1.22
SSX1-201ENST00000376919 HDLBPQ00341 1268 aaKnown RBP7.4□□□□□ -1.22
SSX1-201ENST00000376919 U2AF1Q01081 240 aaKnown RBP eCLIP7.4□□□□□ -1.22
SSX1-201ENST00000376919 FKBP5Q13451 457 aaPredicted RBP7.4□□□□□ -1.22
SSX1-201ENST00000376919 MTMR3Q13615 1198 aa7.4□□□□□ -1.22
SSX1-201ENST00000376919 WDR43Q15061 677 aaKnown RBP eCLIP7.4□□□□□ -1.22
SSX1-201ENST00000376919 SULT6B1Q6IMI4 303 aa7.4□□□□□ -1.22
SSX1-201ENST00000376919 HELQQ8TDG4 1101 aa7.4□□□□□ -1.22
SSX1-201ENST00000376919 COL26A1Q96A83 441 aa7.4□□□□□ -1.22
SSX1-201ENST00000376919 SYTL4Q96C24 671 aaPredicted RBP7.4□□□□□ -1.22
SSX1-201ENST00000376919 SPG7Q9UQ90 795 aa7.4□□□□□ -1.22
SSX1-201ENST00000376919 MAP4K5Q9Y4K4 846 aa7.4□□□□□ -1.22
SSX1-201ENST00000376919 PCDHGA11Q9Y5H2 935 aa7.4□□□□□ -1.22
SSX1-201ENST00000376919 PCDH11XQ9BZA7 1347 aa7.4□□□□□ -1.22
SSX1-201ENST00000376919 PCDH11YQ9BZA8 1340 aa7.4□□□□□ -1.22
SSX1-201ENST00000376919 TNS1Q9HBL0 1735 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms