RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 FAM89AQ96GI7 184 aa16.33■□□□□ 0.2
TRAF1-201ENST00000373887 DCAF5Q96JK2 942 aa16.33■□□□□ 0.2
TRAF1-201ENST00000373887 PHACTR3Q96KR7 559 aa16.33■□□□□ 0.2
TRAF1-201ENST00000373887 KIAA0556O60303 1618 aa16.33■□□□□ 0.2
TRAF1-201ENST00000373887 APBA3O96018 575 aa16.33■□□□□ 0.2
TRAF1-201ENST00000373887 OTUD6BQ8N6M0 293 aa16.33■□□□□ 0.2
TRAF1-201ENST00000373887 CNBD1Q8NA66 436 aa16.33■□□□□ 0.2
TRAF1-201ENST00000373887 TNNQ9UQP3 1299 aa16.33■□□□□ 0.2
TRAF1-201ENST00000373887 MAP3K5Q99683 1374 aa16.33■□□□□ 0.2
TRAF1-201ENST00000373887 GNG11P61952 73 aa16.32■□□□□ 0.2
TRAF1-201ENST00000373887 RBM17Q96I25 401 aaKnown RBP16.32■□□□□ 0.2
TRAF1-201ENST00000373887 CTTNBP2Q8WZ74 1663 aa16.32■□□□□ 0.2
TRAF1-201ENST00000373887 HSP90AA4PQ58FG1 418 aa16.32■□□□□ 0.2
TRAF1-201ENST00000373887 TTC22Q5TAA0 569 aa16.32■□□□□ 0.2
TRAF1-201ENST00000373887 CFAP57Q96MR6 1250 aa16.32■□□□□ 0.2
TRAF1-201ENST00000373887 MCM9Q9NXL9 1143 aa16.32■□□□□ 0.2
TRAF1-201ENST00000373887 TNPO1Q92973 898 aaKnown RBP16.32■□□□□ 0.2
TRAF1-201ENST00000373887 UGGT2Q9NYU1 1516 aa16.32■□□□□ 0.2
TRAF1-201ENST00000373887 PDIA4P13667 645 aaKnown RBP16.32■□□□□ 0.2
TRAF1-201ENST00000373887 ACTN2P35609 894 aa16.32■□□□□ 0.2
TRAF1-201ENST00000373887 PRIM1P49642 420 aaKnown RBP16.32■□□□□ 0.2
TRAF1-201ENST00000373887 KIAA0753Q2KHM9 967 aa16.32■□□□□ 0.2
TRAF1-201ENST00000373887 RAB3IL1Q8TBN0 382 aa16.32■□□□□ 0.2
TRAF1-201ENST00000373887 BRF1Q92994 677 aa16.32■□□□□ 0.2
TRAF1-201ENST00000373887 GJC1P36383 396 aa16.32■□□□□ 0.2
TRAF1-201ENST00000373887 SP4Q02446 784 aa16.32■□□□□ 0.2
TRAF1-201ENST00000373887 TCP11L1Q9NUJ3 509 aa16.32■□□□□ 0.2
TRAF1-201ENST00000373887 GSDMDP57764 484 aa16.31■□□□□ 0.2
TRAF1-201ENST00000373887 MRPL50Q8N5N7 158 aaKnown RBP16.31■□□□□ 0.2
TRAF1-201ENST00000373887 TIGD1Q96MW7 591 aa16.31■□□□□ 0.2
TRAF1-201ENST00000373887 SYNCQ9H7C4 482 aa16.31■□□□□ 0.2
TRAF1-201ENST00000373887 BIN2Q9UBW5 565 aaPredicted RBP16.31■□□□□ 0.2
TRAF1-201ENST00000373887 ASXL1Q8IXJ9 1541 aa16.31■□□□□ 0.2
TRAF1-201ENST00000373887 ABCC10Q5T3U5 1492 aa16.31■□□□□ 0.2
TRAF1-201ENST00000373887 CALM1P0DP23 149 aa16.31■□□□□ 0.2
TRAF1-201ENST00000373887 CALM2P0DP24 149 aa16.31■□□□□ 0.2
TRAF1-201ENST00000373887 CALM3P0DP25 149 aa16.31■□□□□ 0.2
TRAF1-201ENST00000373887 ZBTB21Q9ULJ3 1066 aa16.31■□□□□ 0.2
TRAF1-201ENST00000373887 MAP3K19Q56UN5 1328 aa16.31■□□□□ 0.2
TRAF1-201ENST00000373887 A0A1W2PP64 1363 aa16.31■□□□□ 0.2
TRAF1-201ENST00000373887 PSMC4P43686 418 aa16.31■□□□□ 0.2
TRAF1-201ENST00000373887 DAAM2Q86T65 1068 aa16.31■□□□□ 0.2
TRAF1-201ENST00000373887 CCDC155Q8N6L0 562 aa16.31■□□□□ 0.2
TRAF1-201ENST00000373887 UFL1O94874 794 aa16.3■□□□□ 0.2
TRAF1-201ENST00000373887 HSPA4P34932 840 aa16.3■□□□□ 0.2
TRAF1-201ENST00000373887 AMPD3Q01432 767 aa16.3■□□□□ 0.2
TRAF1-201ENST00000373887 MCM5P33992 734 aa16.3■□□□□ 0.2
TRAF1-201ENST00000373887 FERMT1Q9BQL6 677 aa16.3■□□□□ 0.2
TRAF1-201ENST00000373887 BICC1Q9H694 974 aaKnown RBP16.3■□□□□ 0.2
TRAF1-201ENST00000373887 PAG1Q9NWQ8 432 aa16.3■□□□□ 0.2
TRAF1-201ENST00000373887 TMEM110-MUSTN1A8MSY1 372 aa16.3■□□□□ 0.2
TRAF1-201ENST00000373887 BBXQ8WY36 941 aaPredicted RBP16.3■□□□□ 0.2
TRAF1-201ENST00000373887 IP6K1Q92551 441 aa16.3■□□□□ 0.2
TRAF1-201ENST00000373887 FAM114A1Q8IWE2 563 aa16.3■□□□□ 0.2
TRAF1-201ENST00000373887 CCDC63Q8NA47 563 aa16.3■□□□□ 0.2
TRAF1-201ENST00000373887 ZNF830Q96NB3 372 aaPredicted RBP16.3■□□□□ 0.2
TRAF1-201ENST00000373887 MPHOSPH6Q99547 160 aaKnown RBP16.3■□□□□ 0.2
TRAF1-201ENST00000373887 IQCGQ9H095 443 aaKnown RBP16.3■□□□□ 0.2
TRAF1-201ENST00000373887 RSPH14Q9UHP6 348 aa16.3■□□□□ 0.2
TRAF1-201ENST00000373887 ZWINTO95229 277 aa16.3■□□□□ 0.2
TRAF1-201ENST00000373887 IL15P40933 162 aaPredicted RBP16.3■□□□□ 0.2
TRAF1-201ENST00000373887 TRIM47Q96LD4 638 aa16.29■□□□□ 0.2
TRAF1-201ENST00000373887 MAP3K1Q13233 1512 aa16.29■□□□□ 0.2
TRAF1-201ENST00000373887 ADAMTS12P58397 1594 aa16.29■□□□□ 0.2
TRAF1-201ENST00000373887 CKAP4Q07065 602 aaKnown RBP16.29■□□□□ 0.2
TRAF1-201ENST00000373887 SMARCC2Q8TAQ2 1214 aa16.29■□□□□ 0.2
TRAF1-201ENST00000373887 DDX19AQ9NUU7 478 aaKnown RBP16.29■□□□□ 0.2
TRAF1-201ENST00000373887 LDHBP07195 334 aaKnown RBP16.29■□□□□ 0.2
TRAF1-201ENST00000373887 RXRAP19793 462 aa16.28■□□□□ 0.2
TRAF1-201ENST00000373887 RAB3GAP1Q15042 981 aa16.28■□□□□ 0.2
TRAF1-201ENST00000373887 ESR2Q92731 530 aa16.28■□□□□ 0.2
TRAF1-201ENST00000373887 KRT23Q9C075 422 aa16.28■□□□□ 0.2
TRAF1-201ENST00000373887 NEMFO60524 1076 aa16.28■□□□□ 0.2
TRAF1-201ENST00000373887 SDSP20132 328 aa16.28■□□□□ 0.2
TRAF1-201ENST00000373887 NMIQ13287 307 aaPredicted RBP16.28■□□□□ 0.2
TRAF1-201ENST00000373887 ZKSCAN3Q9BRR0 538 aa16.28■□□□□ 0.2
TRAF1-201ENST00000373887 KIF4AO95239 1232 aa16.28■□□□□ 0.2
TRAF1-201ENST00000373887 EXOC1Q9NV70 894 aa16.28■□□□□ 0.2
TRAF1-201ENST00000373887 ZBTB43O43298 467 aa16.28■□□□□ 0.2
TRAF1-201ENST00000373887 UBA7P41226 1012 aa16.28■□□□□ 0.2
TRAF1-201ENST00000373887 NAPAP54920 295 aa16.28■□□□□ 0.2
TRAF1-201ENST00000373887 GTF2A1P52655 376 aaPredicted RBP16.28■□□□□ 0.2
TRAF1-201ENST00000373887 EIF6P56537 245 aaKnown RBP16.28■□□□□ 0.2
TRAF1-201ENST00000373887 CCDC174Q6PII3 467 aa16.28■□□□□ 0.2
TRAF1-201ENST00000373887 SELENOSQ9BQE4 189 aa16.28■□□□□ 0.2
TRAF1-201ENST00000373887 SREK1Q8WXA9 508 aaKnown RBP16.27■□□□□ 0.2
TRAF1-201ENST00000373887 PKD2L1Q9P0L9 805 aa16.27■□□□□ 0.2
TRAF1-201ENST00000373887 YTHDC2Q9H6S0 1430 aaKnown RBP16.27■□□□□ 0.2
TRAF1-201ENST00000373887 KRT13P13646 458 aa16.27■□□□□ 0.2
TRAF1-201ENST00000373887 AFMP43652 599 aa16.27■□□□□ 0.2
TRAF1-201ENST00000373887 MCMDC2Q4G0Z9 681 aa16.27■□□□□ 0.2
TRAF1-201ENST00000373887 NAP1L3Q99457 506 aaPredicted RBP16.27■□□□□ 0.2
TRAF1-201ENST00000373887 PLEKHH1Q9ULM0 1364 aa16.27■□□□□ 0.2
TRAF1-201ENST00000373887 IL16Q14005 1332 aa16.27■□□□□ 0.2
TRAF1-201ENST00000373887 PRAG1Q86YV5 1406 aa16.27■□□□□ 0.2
TRAF1-201ENST00000373887 ZYXQ15942 572 aaKnown RBP16.27■□□□□ 0.2
TRAF1-201ENST00000373887 N4BP3O15049 544 aa16.27■□□□□ 0.19
TRAF1-201ENST00000373887 RTN1Q16799 776 aa16.27■□□□□ 0.19
TRAF1-201ENST00000373887 Q6ZUG5 572 aa16.27■□□□□ 0.19
TRAF1-201ENST00000373887 SLAIN2Q9P270 581 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms