RNA–Protein interactions for RNA: ENST00000356175.7

NF1-201, Transcript of neurofibromin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NF1, Length 12,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-201ENST00000356175 PRR16Q569H4 304 aa7.73□□□□□ -1.17
NF1-201ENST00000356175 CACNA2D3Q8IZS8 1091 aa7.73□□□□□ -1.17
NF1-201ENST00000356175 PROCA1Q8NCQ7 364 aaPredicted RBP7.73□□□□□ -1.17
NF1-201ENST00000356175 RNF217Q8TC41 542 aa7.73□□□□□ -1.17
NF1-201ENST00000356175 SPZ1Q9BXG8 430 aa7.73□□□□□ -1.17
NF1-201ENST00000356175 DRC3Q9H069 523 aa7.73□□□□□ -1.17
NF1-201ENST00000356175 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.73□□□□□ -1.176e-6■■■□□ 17.8
NF1-201ENST00000356175 ARMC2Q8NEN0 867 aa7.73□□□□□ -1.17
NF1-201ENST00000356175 MIS18AQ9NYP9 233 aa7.73□□□□□ -1.17
NF1-201ENST00000356175 KRT10P13645 584 aa7.73□□□□□ -1.17
NF1-201ENST00000356175 MX1P20591 662 aa7.73□□□□□ -1.17
NF1-201ENST00000356175 FAM200AQ8TCP9 573 aa7.73□□□□□ -1.17
NF1-201ENST00000356175 CNKSR2Q8WXI2 1034 aa7.73□□□□□ -1.17
NF1-201ENST00000356175 ATAD2Q6PL18 1390 aa7.73□□□□□ -1.17
NF1-201ENST00000356175 LUC7L3O95232 432 aaKnown RBP7.73□□□□□ -1.17
NF1-201ENST00000356175 PSMD6Q15008 389 aa7.73□□□□□ -1.17
NF1-201ENST00000356175 KCTD16Q68DU8 428 aa7.73□□□□□ -1.17
NF1-201ENST00000356175 NECAB1Q8N987 351 aa7.73□□□□□ -1.17
NF1-201ENST00000356175 DDX21Q9NR30 783 aaKnown RBP eCLIP7.73□□□□□ -1.17
NF1-201ENST00000356175 NPM1P06748 294 aaKnown RBP eCLIP7.73□□□□□ -1.17
NF1-201ENST00000356175 PSMA5P28066 241 aa7.73□□□□□ -1.17
NF1-201ENST00000356175 TAF11Q15544 211 aa7.73□□□□□ -1.17
NF1-201ENST00000356175 MRPL46Q9H2W6 279 aaKnown RBP7.73□□□□□ -1.17
NF1-201ENST00000356175 RAD50Q92878 1312 aa7.73□□□□□ -1.17
NF1-201ENST00000356175 STIM2Q9P246 746 aa7.73□□□□□ -1.17
NF1-201ENST00000356175 ARID5AQ03989 594 aa7.72□□□□□ -1.17
NF1-201ENST00000356175 SAAL1Q96ER3 474 aa7.72□□□□□ -1.17
NF1-201ENST00000356175 UTP14AQ9BVJ6 771 aaKnown RBP7.72□□□□□ -1.17
NF1-201ENST00000356175 ZCCHC17Q9NP64 241 aaKnown RBP7.72□□□□□ -1.17
NF1-201ENST00000356175 NRBP1Q9UHY1 535 aa7.72□□□□□ -1.17
NF1-201ENST00000356175 FOSL2P15408 326 aa7.72□□□□□ -1.17
NF1-201ENST00000356175 PRPF40BQ6NWY9 871 aaKnown RBP7.72□□□□□ -1.17
NF1-201ENST00000356175 NUDCD3Q8IVD9 361 aa7.72□□□□□ -1.17
NF1-201ENST00000356175 SLC8A1P32418 973 aa7.72□□□□□ -1.17
NF1-201ENST00000356175 IRX1P78414 480 aaPredicted RBP7.72□□□□□ -1.17
NF1-201ENST00000356175 GFM2Q969S9 779 aaKnown RBP7.72□□□□□ -1.17
NF1-201ENST00000356175 CAPS2Q9BXY5 557 aa7.72□□□□□ -1.17
NF1-201ENST00000356175 ASCC3Q8N3C0 2202 aaKnown RBP7.72□□□□□ -1.17
NF1-201ENST00000356175 MYL6BP14649 208 aa7.72□□□□□ -1.17
NF1-201ENST00000356175 MYO1EQ12965 1108 aa7.72□□□□□ -1.17
NF1-201ENST00000356175 C9orf78Q9NZ63 289 aaPredicted RBP7.72□□□□□ -1.17
NF1-201ENST00000356175 NOP2P46087 812 aaKnown RBP7.72□□□□□ -1.17
NF1-201ENST00000356175 PTPN21Q16825 1174 aa7.72□□□□□ -1.17
NF1-201ENST00000356175 ZC3H18Q86VM9 953 aaKnown RBP7.72□□□□□ -1.17
NF1-201ENST00000356175 GNL3LQ9NVN8 582 aaKnown RBP7.72□□□□□ -1.17
NF1-201ENST00000356175 TRDNQ13061 729 aa7.72□□□□□ -1.17
NF1-201ENST00000356175 IFT74Q96LB3 600 aa7.72□□□□□ -1.17
NF1-201ENST00000356175 CHCHD3Q9NX63 227 aaKnown RBP7.72□□□□□ -1.17
NF1-201ENST00000356175 LGR5O75473 907 aa7.72□□□□□ -1.17
NF1-201ENST00000356175 ANKRD24Q8TF21 1146 aa7.72□□□□□ -1.17
NF1-201ENST00000356175 PAFAH1B1P43034 410 aa7.71□□□□□ -1.17
NF1-201ENST00000356175 ZBTB17Q13105 803 aa7.71□□□□□ -1.17
NF1-201ENST00000356175 PDCD7Q8N8D1 485 aaKnown RBP7.71□□□□□ -1.17
NF1-201ENST00000356175 PPP1R14CQ8TAE6 165 aa7.71□□□□□ -1.17
NF1-201ENST00000356175 ANKRD30AQ9BXX3 1397 aa7.71□□□□□ -1.17
NF1-201ENST00000356175 MCUR1Q96AQ8 359 aa7.71□□□□□ -1.17
NF1-201ENST00000356175 CCT2P78371 535 aaKnown RBP7.71□□□□□ -1.17
NF1-201ENST00000356175 PROSER2Q86WR7 435 aaPredicted RBP7.71□□□□□ -1.17
NF1-201ENST00000356175 SPINK5Q9NQ38 1064 aaPredicted RBP7.71□□□□□ -1.17
NF1-201ENST00000356175 MVPQ14764 893 aaKnown RBP7.71□□□□□ -1.18
NF1-201ENST00000356175 LIMCH1Q9UPQ0 1083 aa7.71□□□□□ -1.18
NF1-201ENST00000356175 PSMC1P62191 440 aaKnown RBP7.71□□□□□ -1.18
NF1-201ENST00000356175 LAMB3Q13751 1172 aa7.71□□□□□ -1.18
NF1-201ENST00000356175 PIP4K2CQ8TBX8 421 aa7.71□□□□□ -1.18
NF1-201ENST00000356175 CLCN6P51797 869 aa7.71□□□□□ -1.18
NF1-201ENST00000356175 FGD4Q96M96 766 aa7.71□□□□□ -1.18
NF1-201ENST00000356175 DDX23Q9BUQ8 820 aaKnown RBP7.71□□□□□ -1.18
NF1-201ENST00000356175 CHMP2AO43633 222 aa7.7□□□□□ -1.18
NF1-201ENST00000356175 MYO9BQ13459 2157 aa7.7□□□□□ -1.18
NF1-201ENST00000356175 AKNAD1Q5T1N1 836 aa7.7□□□□□ -1.18
NF1-201ENST00000356175 STK10O94804 968 aaKnown RBP7.7□□□□□ -1.18
NF1-201ENST00000356175 LRRFIP1Q32MZ4 808 aaKnown RBP7.7□□□□□ -1.18
NF1-201ENST00000356175 CCDC122Q5T0U0 273 aa7.7□□□□□ -1.18
NF1-201ENST00000356175 NUTM1Q86Y26 1132 aa7.7□□□□□ -1.18
NF1-201ENST00000356175 MTRQ99707 1265 aa7.7□□□□□ -1.18
NF1-201ENST00000356175 PCYT1AP49585 367 aa7.7□□□□□ -1.18
NF1-201ENST00000356175 CD248Q9HCU0 757 aa7.7□□□□□ -1.18
NF1-201ENST00000356175 MAP3K7CLP57077 242 aa7.7□□□□□ -1.18
NF1-201ENST00000356175 LSM1O15116 133 aaKnown RBP7.7□□□□□ -1.18
NF1-201ENST00000356175 RINLQ6ZS11 566 aa7.7□□□□□ -1.18
NF1-201ENST00000356175 SND1Q7KZF4 910 aaKnown RBP eCLIP7.7□□□□□ -1.18
NF1-201ENST00000356175 DDX46Q7L014 1031 aaKnown RBP7.7□□□□□ -1.18
NF1-201ENST00000356175 TRIM31Q9BZY9 425 aa7.7□□□□□ -1.18
NF1-201ENST00000356175 PPFIBP2Q8ND30 876 aa7.7□□□□□ -1.18
NF1-201ENST00000356175 COQ7Q99807 217 aa7.7□□□□□ -1.18
NF1-201ENST00000356175 NCOA1Q15788 1441 aa7.7□□□□□ -1.18
NF1-201ENST00000356175 CASQ2O14958 399 aaPredicted RBP7.7□□□□□ -1.18
NF1-201ENST00000356175 KRT18P05783 430 aaKnown RBP7.7□□□□□ -1.18
NF1-201ENST00000356175 TCEAL9Q9UHQ7 104 aa7.7□□□□□ -1.18
NF1-201ENST00000356175 KRT13P13646 458 aa7.7□□□□□ -1.18
NF1-201ENST00000356175 GRAMD4Q6IC98 578 aa7.7□□□□□ -1.18
NF1-201ENST00000356175 ZSCAN25Q6NSZ9 544 aa7.7□□□□□ -1.18
NF1-201ENST00000356175 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.7□□□□□ -1.18
NF1-201ENST00000356175 YEATS4O95619 227 aa7.69□□□□□ -1.18
NF1-201ENST00000356175 SLC3A2P08195 630 aaKnown RBP7.69□□□□□ -1.18
NF1-201ENST00000356175 CCT6AP40227 531 aaKnown RBP7.69□□□□□ -1.18
NF1-201ENST00000356175 PIP4K2BP78356 416 aa7.69□□□□□ -1.18
NF1-201ENST00000356175 CKAP4Q07065 602 aaKnown RBP7.69□□□□□ -1.18
NF1-201ENST00000356175 WASHC4Q2M389 1173 aa7.69□□□□□ -1.18
NF1-201ENST00000356175 SRLQ86TD4 932 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms