RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 RAB3GAP1Q15042 981 aa9.05□□□□□ -0.96
HTT-201ENST00000355072 TYW1Q9NV66 732 aaKnown RBP9.05□□□□□ -0.96
HTT-201ENST00000355072 ARAP1Q96P48 1450 aa9.05□□□□□ -0.96
HTT-201ENST00000355072 ADAMTS8Q9UP79 889 aa9.05□□□□□ -0.96
HTT-201ENST00000355072 TRAK1Q9UPV9 953 aa9.05□□□□□ -0.96
HTT-201ENST00000355072 RTL1A6NKG5 1358 aa9.05□□□□□ -0.96
HTT-201ENST00000355072 MYO5CQ9NQX4 1742 aa9.05□□□□□ -0.96
HTT-201ENST00000355072 MAN1A1P33908 653 aa9.05□□□□□ -0.96
HTT-201ENST00000355072 ZBTB16Q05516 673 aa9.05□□□□□ -0.96
HTT-201ENST00000355072 PPP1R2P3Q6NXS1 205 aa9.05□□□□□ -0.96
HTT-201ENST00000355072 TBC1D31Q96DN5 1066 aa9.05□□□□□ -0.96
HTT-201ENST00000355072 CETN3O15182 167 aa9.05□□□□□ -0.96
HTT-201ENST00000355072 NBPF10Q6P3W6 841 aaKnown RBP9.05□□□□□ -0.96
HTT-201ENST00000355072 HOMER3Q9NSC5 361 aa9.05□□□□□ -0.96
HTT-201ENST00000355072 RAI14Q9P0K7 980 aa9.05□□□□□ -0.96
HTT-201ENST00000355072 NPC1L1Q9UHC9 1359 aa9.05□□□□□ -0.96
HTT-201ENST00000355072 RAPGEF6Q8TEU7 1601 aa9.05□□□□□ -0.96
HTT-201ENST00000355072 CFTRP13569 1480 aa9.05□□□□□ -0.96
HTT-201ENST00000355072 LRRD1A4D1F6 860 aa9.05□□□□□ -0.96
HTT-201ENST00000355072 TBC1D2Q9BYX2 928 aa9.05□□□□□ -0.96
HTT-201ENST00000355072 ABCA10Q8WWZ4 1543 aa9.05□□□□□ -0.96
HTT-201ENST00000355072 CWC27Q6UX04 472 aaKnown RBP9.05□□□□□ -0.96
HTT-201ENST00000355072 RAB17Q9H0T7 212 aa9.05□□□□□ -0.96
HTT-201ENST00000355072 NEUROD6Q96NK8 337 aa9.05□□□□□ -0.96
HTT-201ENST00000355072 SYNMO15061 1565 aa9.05□□□□□ -0.96
HTT-201ENST00000355072 MAIP1Q8WWC4 291 aa9.04□□□□□ -0.96
HTT-201ENST00000355072 SCLT1Q96NL6 688 aa9.04□□□□□ -0.96
HTT-201ENST00000355072 CENPKQ9BS16 269 aa9.04□□□□□ -0.96
HTT-201ENST00000355072 I3L4J1 428 aa9.04□□□□□ -0.96
HTT-201ENST00000355072 XRCC6P12956 609 aaKnown RBP eCLIP9.04□□□□□ -0.96
HTT-201ENST00000355072 PDE4BQ07343 736 aa9.04□□□□□ -0.96
HTT-201ENST00000355072 CUL5Q93034 780 aa9.04□□□□□ -0.96
HTT-201ENST00000355072 ZNF330Q9Y3S2 320 aaPredicted RBP9.04□□□□□ -0.96
HTT-201ENST00000355072 CALML3P27482 149 aa9.04□□□□□ -0.96
HTT-201ENST00000355072 TMC6Q7Z403 805 aa9.04□□□□□ -0.96
HTT-201ENST00000355072 TRIML1Q8N9V2 468 aa9.04□□□□□ -0.96
HTT-201ENST00000355072 IMPG2Q9BZV3 1241 aa9.04□□□□□ -0.96
HTT-201ENST00000355072 PLEKHO1Q53GL0 409 aaPredicted RBP9.04□□□□□ -0.96
HTT-201ENST00000355072 RIC3Q7Z5B4 369 aa9.04□□□□□ -0.96
HTT-201ENST00000355072 RASEFQ8IZ41 740 aa9.04□□□□□ -0.96
HTT-201ENST00000355072 XPCQ01831 940 aaPredicted RBP9.04□□□□□ -0.96
HTT-201ENST00000355072 NEK1Q96PY6 1258 aa9.04□□□□□ -0.96
HTT-201ENST00000355072 NAP1L4Q99733 375 aaKnown RBP9.04□□□□□ -0.96
HTT-201ENST00000355072 RILPL1Q5EBL4 403 aa9.04□□□□□ -0.96
HTT-201ENST00000355072 AIDAQ96BJ3 306 aa9.04□□□□□ -0.96
HTT-201ENST00000355072 SH3GL3Q99963 347 aa9.04□□□□□ -0.96
HTT-201ENST00000355072 CCDC194A0A1B0GVG4 234 aa9.04□□□□□ -0.96
HTT-201ENST00000355072 EIF3CLB5ME19 914 aaKnown RBP9.04□□□□□ -0.96
HTT-201ENST00000355072 MCM6Q14566 821 aa9.04□□□□□ -0.96
HTT-201ENST00000355072 RMDN2Q96LZ7 410 aa9.04□□□□□ -0.96
HTT-201ENST00000355072 EIF3CQ99613 913 aaKnown RBP9.04□□□□□ -0.96
HTT-201ENST00000355072 PAF1Q8N7H5 531 aa9.04□□□□□ -0.96
HTT-201ENST00000355072 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.04□□□□□ -0.96
HTT-201ENST00000355072 PRPF6O94906 941 aaKnown RBP9.04□□□□□ -0.96
HTT-201ENST00000355072 SSBP05455 408 aaKnown RBP eCLIP9.04□□□□□ -0.96
HTT-201ENST00000355072 MXRA7P84157 204 aa9.04□□□□□ -0.96
HTT-201ENST00000355072 CYP26C1Q6V0L0 522 aa9.04□□□□□ -0.96
HTT-201ENST00000355072 CCDC51Q96ER9 411 aa9.04□□□□□ -0.96
HTT-201ENST00000355072 CNOT10Q9H9A5 744 aaKnown RBP9.04□□□□□ -0.96
HTT-201ENST00000355072 PPP2R1AP30153 589 aa9.04□□□□□ -0.96
HTT-201ENST00000355072 UBE4BO95155 1302 aa9.03□□□□□ -0.96
HTT-201ENST00000355072 APBB1IPQ7Z5R6 666 aaPredicted RBP9.03□□□□□ -0.96
HTT-201ENST00000355072 RPUSD2Q8IZ73 545 aaKnown RBP9.03□□□□□ -0.96
HTT-201ENST00000355072 ZNF445P59923 1031 aa9.03□□□□□ -0.96
HTT-201ENST00000355072 PPP2R3AQ06190 1150 aa9.03□□□□□ -0.96
HTT-201ENST00000355072 KIFAP3Q92845 792 aa9.03□□□□□ -0.96
HTT-201ENST00000355072 PFDN4Q9NQP4 134 aa9.03□□□□□ -0.96
HTT-201ENST00000355072 NUCB1Q02818 461 aa9.03□□□□□ -0.96
HTT-201ENST00000355072 MRPS27Q92552 414 aaKnown RBP9.03□□□□□ -0.96
HTT-201ENST00000355072 LAMC1P11047 1609 aa9.03□□□□□ -0.96
HTT-201ENST00000355072 PCK1P35558 622 aa9.03□□□□□ -0.96
HTT-201ENST00000355072 SLFN5Q08AF3 891 aa9.03□□□□□ -0.96
HTT-201ENST00000355072 INF2Q27J81 1249 aa9.03□□□□□ -0.96
HTT-201ENST00000355072 HEATR3Q7Z4Q2 680 aa9.03□□□□□ -0.96
HTT-201ENST00000355072 MYO10Q9HD67 2058 aa9.03□□□□□ -0.96
HTT-201ENST00000355072 MYH9P35579 1960 aaKnown RBP9.03□□□□□ -0.96
HTT-201ENST00000355072 ZNF189O75820 626 aaPredicted RBP9.03□□□□□ -0.96
HTT-201ENST00000355072 RPL13P26373 211 aaKnown RBP9.03□□□□□ -0.96
HTT-201ENST00000355072 MTHFSP49914 203 aa9.03□□□□□ -0.96
HTT-201ENST00000355072 CCDC170Q8IYT3 715 aa9.03□□□□□ -0.96
HTT-201ENST00000355072 ZGPATQ8N5A5 531 aaKnown RBP9.03□□□□□ -0.96
HTT-201ENST00000355072 MIS12Q9H081 205 aa9.03□□□□□ -0.96
HTT-201ENST00000355072 TXNDC16Q9P2K2 825 aa9.03□□□□□ -0.96
HTT-201ENST00000355072 PTPRGP23470 1445 aa9.03□□□□□ -0.96
HTT-201ENST00000355072 MIER3Q7Z3K6 550 aa9.03□□□□□ -0.96
HTT-201ENST00000355072 KRT23Q9C075 422 aa9.03□□□□□ -0.96
HTT-201ENST00000355072 TRAPPC8Q9Y2L5 1435 aa9.03□□□□□ -0.96
HTT-201ENST00000355072 ABCD1P33897 745 aa9.02□□□□□ -0.96
HTT-201ENST00000355072 NT5C2P49902 561 aa9.02□□□□□ -0.96
HTT-201ENST00000355072 LLPHQ9BRT6 129 aaKnown RBP9.02□□□□□ -0.96
HTT-201ENST00000355072 GOLGA8KD6RF30 607 aa9.02□□□□□ -0.96
HTT-201ENST00000355072 CFAP221Q4G0U5 840 aa9.02□□□□□ -0.96
HTT-201ENST00000355072 CCDC124Q96CT7 223 aaKnown RBP9.02□□□□□ -0.96
HTT-201ENST00000355072 CLNS1AP54105 237 aaKnown RBP9.02□□□□□ -0.97
HTT-201ENST00000355072 LCMT1Q9UIC8 334 aa9.02□□□□□ -0.97
HTT-201ENST00000355072 GNAT2P19087 354 aa9.02□□□□□ -0.97
HTT-201ENST00000355072 SEL1L2Q5TEA6 688 aa9.02□□□□□ -0.97
HTT-201ENST00000355072 TTC22Q5TAA0 569 aa9.02□□□□□ -0.97
HTT-201ENST00000355072 CATIPQ7Z7H3 387 aa9.02□□□□□ -0.97
HTT-201ENST00000355072 TRIM4Q9C037 500 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 341.7 ms