RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 MCM7P33993 719 aa15.24■□□□□ 0.03
LMBR1-201ENST00000353442 FNBP1Q96RU3 617 aa15.24■□□□□ 0.03
LMBR1-201ENST00000353442 GNPATO15228 680 aa15.24■□□□□ 0.03
LMBR1-201ENST00000353442 SLC8A3P57103 927 aa15.24■□□□□ 0.03
LMBR1-201ENST00000353442 PPARDQ03181 441 aa15.24■□□□□ 0.03
LMBR1-201ENST00000353442 RTN1Q16799 776 aa15.24■□□□□ 0.03
LMBR1-201ENST00000353442 MARCKSP29966 332 aaPredicted RBP15.24■□□□□ 0.03
LMBR1-201ENST00000353442 ATP6V0A2Q9Y487 856 aa15.24■□□□□ 0.03
LMBR1-201ENST00000353442 CAPZA3Q96KX2 299 aa15.24■□□□□ 0.03
LMBR1-201ENST00000353442 NSD3Q9BZ95 1437 aa15.24■□□□□ 0.03
LMBR1-201ENST00000353442 WDR63Q8IWG1 891 aa15.24■□□□□ 0.03
LMBR1-201ENST00000353442 KRT19P08727 400 aa15.23■□□□□ 0.03
LMBR1-201ENST00000353442 GTF2F1P35269 517 aaKnown RBP eCLIP15.23■□□□□ 0.032e-7■■■■■ 37.4
LMBR1-201ENST00000353442 DZIP3Q86Y13 1208 aaKnown RBP15.23■□□□□ 0.03
LMBR1-201ENST00000353442 MSANTD4Q8NCY6 345 aa15.23■□□□□ 0.03
LMBR1-201ENST00000353442 DHX58Q96C10 678 aa15.23■□□□□ 0.03
LMBR1-201ENST00000353442 CCDC183Q5T5S1 534 aa15.23■□□□□ 0.03
LMBR1-201ENST00000353442 SELENOOQ9BVL4 669 aa15.23■□□□□ 0.03
LMBR1-201ENST00000353442 PPP1R7Q15435 360 aa15.23■□□□□ 0.03
LMBR1-201ENST00000353442 DYNC1I1O14576 645 aa15.23■□□□□ 0.03
LMBR1-201ENST00000353442 NAA25Q14CX7 972 aa15.23■□□□□ 0.03
LMBR1-201ENST00000353442 SMCR8Q8TEV9 937 aaPredicted RBP15.23■□□□□ 0.03
LMBR1-201ENST00000353442 NEK1Q96PY6 1258 aa15.23■□□□□ 0.03
LMBR1-201ENST00000353442 ALG1Q9BT22 464 aa15.23■□□□□ 0.03
LMBR1-201ENST00000353442 SLC52A1Q9NWF4 448 aa15.23■□□□□ 0.03
LMBR1-201ENST00000353442 KIF5AQ12840 1032 aa15.23■□□□□ 0.03
LMBR1-201ENST00000353442 PDE3AQ14432 1141 aa15.23■□□□□ 0.03
LMBR1-201ENST00000353442 NECAB1Q8N987 351 aa15.23■□□□□ 0.03
LMBR1-201ENST00000353442 MKRN1Q9UHC7 482 aaKnown RBP15.23■□□□□ 0.03
LMBR1-201ENST00000353442 GAPVD1Q14C86 1478 aa15.23■□□□□ 0.03
LMBR1-201ENST00000353442 TCEANC2Q96MN5 208 aa15.23■□□□□ 0.03
LMBR1-201ENST00000353442 ANKFY1Q9P2R3 1169 aa15.22■□□□□ 0.03
LMBR1-201ENST00000353442 PRG4Q92954 1404 aaPredicted RBP15.22■□□□□ 0.03
LMBR1-201ENST00000353442 MAGEB6Q8N7X4 407 aa15.22■□□□□ 0.03
LMBR1-201ENST00000353442 ZKSCAN3Q9BRR0 538 aa15.22■□□□□ 0.03
LMBR1-201ENST00000353442 UQCRFS1P1P0C7P4 283 aa15.22■□□□□ 0.03
LMBR1-201ENST00000353442 ERCC3P19447 782 aa15.22■□□□□ 0.03
LMBR1-201ENST00000353442 PAGR1Q9BTK6 254 aa15.22■□□□□ 0.03
LMBR1-201ENST00000353442 ZBTB43O43298 467 aa15.22■□□□□ 0.03
LMBR1-201ENST00000353442 NOL3O60936 208 aaKnown RBP15.22■□□□□ 0.03
LMBR1-201ENST00000353442 CPXCR1Q8N123 301 aa15.22■□□□□ 0.03
LMBR1-201ENST00000353442 RXRAP19793 462 aa15.22■□□□□ 0.03
LMBR1-201ENST00000353442 MSL1Q68DK7 614 aa15.22■□□□□ 0.03
LMBR1-201ENST00000353442 EVI5LQ96CN4 794 aa15.22■□□□□ 0.03
LMBR1-201ENST00000353442 USP25Q9UHP3 1055 aa15.22■□□□□ 0.03
LMBR1-201ENST00000353442 ATP2A1O14983 1001 aa15.22■□□□□ 0.03
LMBR1-201ENST00000353442 KIF22Q14807 665 aa15.22■□□□□ 0.03
LMBR1-201ENST00000353442 SCAND2PQ9GZW5 306 aaPredicted RBP15.22■□□□□ 0.03
LMBR1-201ENST00000353442 ESR2Q92731 530 aa15.22■□□□□ 0.03
LMBR1-201ENST00000353442 RBM17Q96I25 401 aaKnown RBP15.22■□□□□ 0.03
LMBR1-201ENST00000353442 CCDC102BQ68D86 513 aa15.21■□□□□ 0.03
LMBR1-201ENST00000353442 GTPBP4Q9BZE4 634 aaKnown RBP15.21■□□□□ 0.03
LMBR1-201ENST00000353442 NYXQ9GZU5 481 aa15.21■□□□□ 0.03
LMBR1-201ENST00000353442 PI4KAP2A4QPH2 592 aa15.21■□□□□ 0.03
LMBR1-201ENST00000353442 HSPA1LP34931 641 aa15.21■□□□□ 0.03
LMBR1-201ENST00000353442 TRPC3Q13507 836 aa15.21■□□□□ 0.03
LMBR1-201ENST00000353442 FBXO31Q5XUX0 539 aaPredicted RBP15.21■□□□□ 0.03
LMBR1-201ENST00000353442 SEPT14Q6ZU15 432 aa15.21■□□□□ 0.03
LMBR1-201ENST00000353442 PI4KAP1Q8N8J0 262 aa15.21■□□□□ 0.03
LMBR1-201ENST00000353442 KIAA1524Q8TCG1 905 aa15.21■□□□□ 0.03
LMBR1-201ENST00000353442 TCP10Q12799 353 aa15.21■□□□□ 0.03
LMBR1-201ENST00000353442 FAM204AQ9H8W3 233 aa15.21■□□□□ 0.03
LMBR1-201ENST00000353442 TLDC2A0PJX2 215 aa15.21■□□□□ 0.02
LMBR1-201ENST00000353442 BRD4O60885 1362 aaPredicted RBP15.21■□□□□ 0.02
LMBR1-201ENST00000353442 KRT23Q9C075 422 aa15.21■□□□□ 0.02
LMBR1-201ENST00000353442 BCS1LQ9Y276 419 aa15.21■□□□□ 0.02
LMBR1-201ENST00000353442 SNRPA1P09661 255 aaKnown RBP15.2■□□□□ 0.02
LMBR1-201ENST00000353442 GNG11P61952 73 aa15.2■□□□□ 0.02
LMBR1-201ENST00000353442 TPTE2Q6XPS3 522 aa15.2■□□□□ 0.02
LMBR1-201ENST00000353442 RMND1Q9NWS8 449 aa15.2■□□□□ 0.02
LMBR1-201ENST00000353442 GOLGA6L9A6NEM1 432 aa15.2■□□□□ 0.02
LMBR1-201ENST00000353442 MSH6P52701 1360 aa15.2■□□□□ 0.02
LMBR1-201ENST00000353442 EYA3Q99504 573 aa15.2■□□□□ 0.02
LMBR1-201ENST00000353442 ARHGAP27Q6ZUM4 889 aa15.2■□□□□ 0.02
LMBR1-201ENST00000353442 LARGE2Q8N3Y3 721 aa15.2■□□□□ 0.02
LMBR1-201ENST00000353442 TBC1D31Q96DN5 1066 aa15.2■□□□□ 0.02
LMBR1-201ENST00000353442 CHMP6Q96FZ7 201 aa15.2■□□□□ 0.02
LMBR1-201ENST00000353442 WDR44Q5JSH3 913 aa15.2■□□□□ 0.02
LMBR1-201ENST00000353442 TRAPPC3LQ5T215 181 aa15.2■□□□□ 0.02
LMBR1-201ENST00000353442 SLC9C2Q5TAH2 1124 aa15.2■□□□□ 0.02
LMBR1-201ENST00000353442 GPIHBP1Q8IV16 184 aa15.2■□□□□ 0.02
LMBR1-201ENST00000353442 TRIM7Q9C029 511 aa15.2■□□□□ 0.02
LMBR1-201ENST00000353442 LDHBP07195 334 aaKnown RBP15.2■□□□□ 0.02
LMBR1-201ENST00000353442 MCM5P33992 734 aa15.2■□□□□ 0.02
LMBR1-201ENST00000353442 SYKP43405 635 aa15.2■□□□□ 0.02
LMBR1-201ENST00000353442 TACC3Q9Y6A5 838 aa15.2■□□□□ 0.02
LMBR1-201ENST00000353442 FAM83GA6ND36 823 aa15.19■□□□□ 0.02
LMBR1-201ENST00000353442 GNL1P36915 607 aaPredicted RBP15.19■□□□□ 0.02
LMBR1-201ENST00000353442 SEC62Q99442 399 aaKnown RBP15.19■□□□□ 0.02
LMBR1-201ENST00000353442 MED10Q9BTT4 135 aa15.19■□□□□ 0.02
LMBR1-201ENST00000353442 KAT6BQ8WYB5 2073 aa15.19■□□□□ 0.02
LMBR1-201ENST00000353442 TRAF1Q13077 416 aa15.19■□□□□ 0.02
LMBR1-201ENST00000353442 STX1AQ16623 288 aa15.19■□□□□ 0.02
LMBR1-201ENST00000353442 STX10O60499 249 aa15.19■□□□□ 0.02
LMBR1-201ENST00000353442 FAM160A1Q05DH4 1040 aa15.19■□□□□ 0.02
LMBR1-201ENST00000353442 ANKRD13DQ6ZTN6 518 aa15.19■□□□□ 0.02
LMBR1-201ENST00000353442 LIMCH1Q9UPQ0 1083 aa15.19■□□□□ 0.02
LMBR1-201ENST00000353442 USH1GQ495M9 461 aa15.19■□□□□ 0.02
LMBR1-201ENST00000353442 SKAP1Q86WV1 359 aa15.19■□□□□ 0.02
LMBR1-201ENST00000353442 DDX12PQ92771 950 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms