RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 PTPDC1A2A3K4 754 aa18■□□□□ 0.47
CARMIL3-201ENST00000342740 CCDC87Q9NVE4 849 aa18■□□□□ 0.47
CARMIL3-201ENST00000342740 ARAP3Q8WWN8 1544 aa18■□□□□ 0.47
CARMIL3-201ENST00000342740 MBD4O95243 580 aa17.99■□□□□ 0.47
CARMIL3-201ENST00000342740 TNIP1Q15025 636 aa17.99■□□□□ 0.47
CARMIL3-201ENST00000342740 PUM3Q15397 648 aaKnown RBP17.99■□□□□ 0.47
CARMIL3-201ENST00000342740 FAM98CQ17RN3 349 aaKnown RBP17.99■□□□□ 0.47
CARMIL3-201ENST00000342740 CCDC178Q5BJE1 867 aa17.99■□□□□ 0.47
CARMIL3-201ENST00000342740 KBTBD3Q8NAB2 608 aa17.99■□□□□ 0.47
CARMIL3-201ENST00000342740 FEZ1Q99689 392 aa17.99■□□□□ 0.47
CARMIL3-201ENST00000342740 GNAQP50148 359 aa17.99■□□□□ 0.47
CARMIL3-201ENST00000342740 NDUFB9Q9Y6M9 179 aa17.99■□□□□ 0.47
CARMIL3-201ENST00000342740 DCAF8L1A6NGE4 600 aa17.99■□□□□ 0.47
CARMIL3-201ENST00000342740 UVSSAQ2YD98 709 aa17.99■□□□□ 0.47
CARMIL3-201ENST00000342740 MRPS27Q92552 414 aaKnown RBP17.99■□□□□ 0.47
CARMIL3-201ENST00000342740 JAG2Q9Y219 1238 aa17.99■□□□□ 0.47
CARMIL3-201ENST00000342740 UQCRHLA0A096LP55 91 aa17.99■□□□□ 0.47
CARMIL3-201ENST00000342740 UQCRHP07919 91 aa17.99■□□□□ 0.47
CARMIL3-201ENST00000342740 IDEP14735 1019 aa17.99■□□□□ 0.47
CARMIL3-201ENST00000342740 PTPN14Q15678 1187 aa17.99■□□□□ 0.47
CARMIL3-201ENST00000342740 BEND3Q5T5X7 828 aa17.99■□□□□ 0.47
CARMIL3-201ENST00000342740 KANK3Q6NY19 840 aa17.99■□□□□ 0.47
CARMIL3-201ENST00000342740 SNX14Q9Y5W7 946 aa17.99■□□□□ 0.47
CARMIL3-201ENST00000342740 SHROOM2Q13796 1616 aa17.99■□□□□ 0.47
CARMIL3-201ENST00000342740 SLC27A2O14975 620 aa17.98■□□□□ 0.47
CARMIL3-201ENST00000342740 ADCY10Q96PN6 1610 aa17.98■□□□□ 0.47
CARMIL3-201ENST00000342740 MARCKSP29966 332 aaPredicted RBP17.98■□□□□ 0.47
CARMIL3-201ENST00000342740 TCIRG1Q13488 830 aa17.98■□□□□ 0.47
CARMIL3-201ENST00000342740 IQGAP3Q86VI3 1631 aa17.98■□□□□ 0.47
CARMIL3-201ENST00000342740 CALML4Q96GE6 196 aa17.98■□□□□ 0.47
CARMIL3-201ENST00000342740 NPHP4O75161 1426 aaPredicted RBP17.97■□□□□ 0.47
CARMIL3-201ENST00000342740 CDR1P51861 262 aa17.97■□□□□ 0.47
CARMIL3-201ENST00000342740 PICALMQ13492 652 aa17.97■□□□□ 0.47
CARMIL3-201ENST00000342740 ZNF397Q8NF99 534 aaPredicted RBP17.97■□□□□ 0.47
CARMIL3-201ENST00000342740 APPBP2Q92624 585 aa17.97■□□□□ 0.47
CARMIL3-201ENST00000342740 CCDC181Q5TID7 509 aa17.97■□□□□ 0.47
CARMIL3-201ENST00000342740 WWC2Q6AWC2 1192 aa17.97■□□□□ 0.47
CARMIL3-201ENST00000342740 LDHBP07195 334 aaKnown RBP17.97■□□□□ 0.47
CARMIL3-201ENST00000342740 RPS6KB1P23443 525 aa17.97■□□□□ 0.47
CARMIL3-201ENST00000342740 FKBP15Q5T1M5 1219 aa17.97■□□□□ 0.47
CARMIL3-201ENST00000342740 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.97■□□□□ 0.47
CARMIL3-201ENST00000342740 PPP1R12BO60237 982 aaPredicted RBP17.96■□□□□ 0.47
CARMIL3-201ENST00000342740 BMP15O95972 392 aa17.96■□□□□ 0.47
CARMIL3-201ENST00000342740 XRCC6P12956 609 aaKnown RBP eCLIP17.96■□□□□ 0.47
CARMIL3-201ENST00000342740 RXRAP19793 462 aa17.96■□□□□ 0.47
CARMIL3-201ENST00000342740 KIAA1328Q86T90 577 aa17.96■□□□□ 0.47
CARMIL3-201ENST00000342740 PYM1Q9BRP8 204 aaKnown RBP17.96■□□□□ 0.47
CARMIL3-201ENST00000342740 CLASP1Q7Z460 1538 aa17.96■□□□□ 0.47
CARMIL3-201ENST00000342740 TTLL7Q6ZT98 887 aa17.96■□□□□ 0.47
CARMIL3-201ENST00000342740 CNBD1Q8NA66 436 aa17.96■□□□□ 0.47
CARMIL3-201ENST00000342740 TSG101Q99816 390 aa17.96■□□□□ 0.47
CARMIL3-201ENST00000342740 UBA5Q9GZZ9 404 aa17.96■□□□□ 0.47
CARMIL3-201ENST00000342740 SPTLC2O15270 562 aa17.96■□□□□ 0.47
CARMIL3-201ENST00000342740 GSPT1P15170 499 aaKnown RBP17.96■□□□□ 0.47
CARMIL3-201ENST00000342740 CPLX3Q8WVH0 158 aa17.96■□□□□ 0.47
CARMIL3-201ENST00000342740 DENND2AQ9ULE3 1009 aa17.96■□□□□ 0.46
CARMIL3-201ENST00000342740 KIF2AO00139 706 aaPredicted RBP17.95■□□□□ 0.46
CARMIL3-201ENST00000342740 ZSCAN12O43309 604 aa17.95■□□□□ 0.46
CARMIL3-201ENST00000342740 TAF5LO75529 589 aa17.95■□□□□ 0.46
CARMIL3-201ENST00000342740 ZNF853P0CG23 659 aa17.95■□□□□ 0.46
CARMIL3-201ENST00000342740 AMPD3Q01432 767 aa17.95■□□□□ 0.46
CARMIL3-201ENST00000342740 SEPT11Q9NVA2 429 aaKnown RBP17.95■□□□□ 0.46
CARMIL3-201ENST00000342740 PLCG2P16885 1265 aa17.95■□□□□ 0.46
CARMIL3-201ENST00000342740 CCDC148Q8NFR7 591 aa17.95■□□□□ 0.46
CARMIL3-201ENST00000342740 EAF2Q96CJ1 260 aaPredicted RBP17.95■□□□□ 0.46
CARMIL3-201ENST00000342740 GPAA1O43292 621 aa17.94■□□□□ 0.46
CARMIL3-201ENST00000342740 CALM1P0DP23 149 aa17.94■□□□□ 0.46
CARMIL3-201ENST00000342740 CALM2P0DP24 149 aa17.94■□□□□ 0.46
CARMIL3-201ENST00000342740 CALM3P0DP25 149 aa17.94■□□□□ 0.46
CARMIL3-201ENST00000342740 TMC6Q7Z403 805 aa17.94■□□□□ 0.46
CARMIL3-201ENST00000342740 HEATR3Q7Z4Q2 680 aa17.94■□□□□ 0.46
CARMIL3-201ENST00000342740 LPIN2Q92539 896 aa17.94■□□□□ 0.46
CARMIL3-201ENST00000342740 KDRP35968 1356 aa17.94■□□□□ 0.46
CARMIL3-201ENST00000342740 FAM200AQ8TCP9 573 aa17.94■□□□□ 0.46
CARMIL3-201ENST00000342740 FGFR1OPO95684 399 aaKnown RBP17.94■□□□□ 0.46
CARMIL3-201ENST00000342740 ATP5JP18859 108 aa17.94■□□□□ 0.46
CARMIL3-201ENST00000342740 ANO6Q4KMQ2 910 aa17.94■□□□□ 0.46
CARMIL3-201ENST00000342740 OGFOD1Q8N543 542 aa17.94■□□□□ 0.46
CARMIL3-201ENST00000342740 EDC3Q96F86 508 aaKnown RBP17.94■□□□□ 0.46
CARMIL3-201ENST00000342740 KIF20AO95235 890 aa17.94■□□□□ 0.46
CARMIL3-201ENST00000342740 TRIM75PA6NK02 468 aa17.93■□□□□ 0.46
CARMIL3-201ENST00000342740 RIMBP2O15034 1052 aa17.93■□□□□ 0.46
CARMIL3-201ENST00000342740 NEMFO60524 1076 aa17.93■□□□□ 0.46
CARMIL3-201ENST00000342740 ZKSCAN3Q9BRR0 538 aa17.93■□□□□ 0.46
CARMIL3-201ENST00000342740 MYO6Q9UM54 1294 aa17.93■□□□□ 0.46
CARMIL3-201ENST00000342740 B4E1Z4 1266 aa17.93■□□□□ 0.46
CARMIL3-201ENST00000342740 HIBADHP31937 336 aaKnown RBP17.93■□□□□ 0.46
CARMIL3-201ENST00000342740 GSDMDP57764 484 aa17.93■□□□□ 0.46
CARMIL3-201ENST00000342740 PROSER3Q2NL68 480 aa17.93■□□□□ 0.46
CARMIL3-201ENST00000342740 CACNA2D4Q7Z3S7 1137 aa17.93■□□□□ 0.46
CARMIL3-201ENST00000342740 TRMT1Q9NXH9 659 aaKnown RBP17.93■□□□□ 0.46
CARMIL3-201ENST00000342740 MYO1BO43795 1136 aa17.93■□□□□ 0.46
CARMIL3-201ENST00000342740 KIF18AQ8NI77 898 aa17.93■□□□□ 0.46
CARMIL3-201ENST00000342740 PARP3Q9Y6F1 533 aa17.93■□□□□ 0.46
CARMIL3-201ENST00000342740 UBXN4Q92575 508 aa17.93■□□□□ 0.46
CARMIL3-201ENST00000342740 HSPA4P34932 840 aa17.92■□□□□ 0.46
CARMIL3-201ENST00000342740 AFMP43652 599 aa17.92■□□□□ 0.46
CARMIL3-201ENST00000342740 ARMT1Q9H993 441 aa17.92■□□□□ 0.46
CARMIL3-201ENST00000342740 ERBB4Q15303 1308 aa17.92■□□□□ 0.46
CARMIL3-201ENST00000342740 RTL9Q8NET4 1388 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms