RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 PDE8BO95263 885 aa10.73□□□□□ -0.69
CCDC144B-201ENST00000285176 IFFO2Q5TF58 517 aa10.73□□□□□ -0.69
CCDC144B-201ENST00000285176 GDPD2Q9HCC8 539 aa10.73□□□□□ -0.69
CCDC144B-201ENST00000285176 PUM3Q15397 648 aaKnown RBP10.73□□□□□ -0.69
CCDC144B-201ENST00000285176 RBM26Q5T8P6 1007 aaKnown RBP10.73□□□□□ -0.69
CCDC144B-201ENST00000285176 PI4K2BQ8TCG2 481 aa10.73□□□□□ -0.69
CCDC144B-201ENST00000285176 NARFQ9UHQ1 456 aa10.73□□□□□ -0.69
CCDC144B-201ENST00000285176 RANBP6O60518 1105 aaKnown RBP10.72□□□□□ -0.69
CCDC144B-201ENST00000285176 HIP1O00291 1037 aa10.72□□□□□ -0.69
CCDC144B-201ENST00000285176 CHRNA5P30532 468 aa10.72□□□□□ -0.69
CCDC144B-201ENST00000285176 GOLGA6L6A8MZA4 724 aa10.72□□□□□ -0.69
CCDC144B-201ENST00000285176 NRDCO43847 1150 aa10.72□□□□□ -0.69
CCDC144B-201ENST00000285176 MBD4O95243 580 aa10.72□□□□□ -0.69
CCDC144B-201ENST00000285176 RASEFQ8IZ41 740 aa10.72□□□□□ -0.69
CCDC144B-201ENST00000285176 ZC3H12CQ9C0D7 883 aaKnown RBP10.72□□□□□ -0.69
CCDC144B-201ENST00000285176 TTC41PQ6P2S7 1318 aa10.72□□□□□ -0.69
CCDC144B-201ENST00000285176 USP5P45974 858 aa10.72□□□□□ -0.69
CCDC144B-201ENST00000285176 SDR42E1Q8WUS8 393 aa10.72□□□□□ -0.69
CCDC144B-201ENST00000285176 BRF1Q92994 677 aa10.72□□□□□ -0.69
CCDC144B-201ENST00000285176 AATFQ9NY61 560 aaKnown RBP eCLIP10.72□□□□□ -0.69
CCDC144B-201ENST00000285176 MCMDC2Q4G0Z9 681 aa10.71□□□□□ -0.69
CCDC144B-201ENST00000285176 ATG9AQ7Z3C6 839 aa10.71□□□□□ -0.69
CCDC144B-201ENST00000285176 PDGFDQ9GZP0 370 aaPredicted RBP10.71□□□□□ -0.69
CCDC144B-201ENST00000285176 TNS2Q63HR2 1409 aa10.71□□□□□ -0.69
CCDC144B-201ENST00000285176 ERVV-1B6SEH8 477 aa10.71□□□□□ -0.69
CCDC144B-201ENST00000285176 KLRK1P26718 216 aa10.71□□□□□ -0.69
CCDC144B-201ENST00000285176 SLC4A4Q9Y6R1 1079 aa10.71□□□□□ -0.69
CCDC144B-201ENST00000285176 ADCK5Q3MIX3 580 aa10.71□□□□□ -0.7
CCDC144B-201ENST00000285176 ZNF213O14771 459 aa10.7□□□□□ -0.7
CCDC144B-201ENST00000285176 SGSM2O43147 1006 aa10.7□□□□□ -0.7
CCDC144B-201ENST00000285176 SF3A1Q15459 793 aaKnown RBP10.7□□□□□ -0.7
CCDC144B-201ENST00000285176 LPIN2Q92539 896 aa10.7□□□□□ -0.7
CCDC144B-201ENST00000285176 ZNF532Q9HCE3 1301 aa10.7□□□□□ -0.7
CCDC144B-201ENST00000285176 FIBPO43427 364 aa10.7□□□□□ -0.7
CCDC144B-201ENST00000285176 SSFA2P28290 1259 aa10.7□□□□□ -0.7
CCDC144B-201ENST00000285176 HIBADHP31937 336 aaKnown RBP10.7□□□□□ -0.7
CCDC144B-201ENST00000285176 SCNN1DP51172 638 aa10.7□□□□□ -0.7
CCDC144B-201ENST00000285176 NAA16Q6N069 864 aaPredicted RBP10.7□□□□□ -0.7
CCDC144B-201ENST00000285176 SPATA5Q8NB90 893 aa10.7□□□□□ -0.7
CCDC144B-201ENST00000285176 DBNDD1Q9H9R9 158 aa10.7□□□□□ -0.7
CCDC144B-201ENST00000285176 SAP30BPQ9UHR5 308 aaKnown RBP10.7□□□□□ -0.7
CCDC144B-201ENST00000285176 IMMTQ16891 758 aaKnown RBP10.7□□□□□ -0.7
CCDC144B-201ENST00000285176 MICU3Q86XE3 530 aa10.7□□□□□ -0.7
CCDC144B-201ENST00000285176 INCENPQ9NQS7 918 aa10.7□□□□□ -0.7
CCDC144B-201ENST00000285176 GPAA1O43292 621 aa10.7□□□□□ -0.7
CCDC144B-201ENST00000285176 MCAMP43121 646 aa10.7□□□□□ -0.7
CCDC144B-201ENST00000285176 GTF2IP78347 998 aa10.7□□□□□ -0.7
CCDC144B-201ENST00000285176 CREB3L3Q68CJ9 461 aa10.7□□□□□ -0.7
CCDC144B-201ENST00000285176 KBTBD3Q8NAB2 608 aa10.7□□□□□ -0.7
CCDC144B-201ENST00000285176 KIF3AQ9Y496 699 aa10.7□□□□□ -0.7
CCDC144B-201ENST00000285176 BCL9LQ86UU0 1499 aa10.7□□□□□ -0.7
CCDC144B-201ENST00000285176 RNF113AO15541 343 aaKnown RBP10.69□□□□□ -0.7
CCDC144B-201ENST00000285176 RASGRF1Q13972 1273 aa10.69□□□□□ -0.7
CCDC144B-201ENST00000285176 R3HDM1Q15032 1099 aaKnown RBP10.69□□□□□ -0.7
CCDC144B-201ENST00000285176 CSPP1Q1MSJ5 1256 aa10.69□□□□□ -0.7
CCDC144B-201ENST00000285176 ZNF34Q8IZ26 560 aa10.69□□□□□ -0.7
CCDC144B-201ENST00000285176 PSMA5P28066 241 aa10.69□□□□□ -0.7
CCDC144B-201ENST00000285176 LRP10Q7Z4F1 713 aa10.69□□□□□ -0.7
CCDC144B-201ENST00000285176 TMX3Q96JJ7 454 aa10.69□□□□□ -0.7
CCDC144B-201ENST00000285176 TRIM34Q9BYJ4 488 aa10.69□□□□□ -0.7
CCDC144B-201ENST00000285176 SCAF8Q9UPN6 1271 aaKnown RBP10.69□□□□□ -0.7
CCDC144B-201ENST00000285176 CCDC171Q6TFL3 1326 aa10.69□□□□□ -0.7
CCDC144B-201ENST00000285176 PRKAB2O43741 272 aa10.69□□□□□ -0.7
CCDC144B-201ENST00000285176 KIAA2012Q0VF49 1180 aa10.69□□□□□ -0.7
CCDC144B-201ENST00000285176 DIXDC1Q155Q3 683 aa10.69□□□□□ -0.7
CCDC144B-201ENST00000285176 PUS7LQ9H0K6 701 aaKnown RBP10.69□□□□□ -0.7
CCDC144B-201ENST00000285176 ATP6V1DQ9Y5K8 247 aa10.69□□□□□ -0.7
CCDC144B-201ENST00000285176 ERICH2A1L162 156 aa10.68□□□□□ -0.7
CCDC144B-201ENST00000285176 ATP5JP18859 108 aa10.68□□□□□ -0.7
CCDC144B-201ENST00000285176 AK2P54819 239 aa10.68□□□□□ -0.7
CCDC144B-201ENST00000285176 CTDSPL2Q05D32 466 aa10.68□□□□□ -0.7
CCDC144B-201ENST00000285176 COL23A1Q86Y22 540 aaPredicted RBP10.68□□□□□ -0.7
CCDC144B-201ENST00000285176 C2CD5Q86YS7 1000 aa10.68□□□□□ -0.7
CCDC144B-201ENST00000285176 MYL10Q9BUA6 226 aa10.68□□□□□ -0.7
CCDC144B-201ENST00000285176 NACAP1Q9BZK3 213 aa10.68□□□□□ -0.7
CCDC144B-201ENST00000285176 BCS1LQ9Y276 419 aa10.68□□□□□ -0.7
CCDC144B-201ENST00000285176 NTSR2O95665 410 aa10.68□□□□□ -0.7
CCDC144B-201ENST00000285176 POLR3DP05423 398 aaPredicted RBP10.68□□□□□ -0.7
CCDC144B-201ENST00000285176 RFX5P48382 616 aaPredicted RBP10.68□□□□□ -0.7
CCDC144B-201ENST00000285176 SKOR2Q2VWA4 1001 aaPredicted RBP10.68□□□□□ -0.7
CCDC144B-201ENST00000285176 DPP8Q6V1X1 898 aaPredicted RBP10.68□□□□□ -0.7
CCDC144B-201ENST00000285176 A0A0G2JLW4 131 aa10.68□□□□□ -0.7
CCDC144B-201ENST00000285176 PRR5LQ6MZQ0 368 aa10.68□□□□□ -0.7
CCDC144B-201ENST00000285176 SYNE3Q6ZMZ3 975 aa10.68□□□□□ -0.7
CCDC144B-201ENST00000285176 NCOA5Q9HCD5 579 aaKnown RBP10.68□□□□□ -0.7
CCDC144B-201ENST00000285176 MPHOSPH10O00566 681 aaKnown RBP10.67□□□□□ -0.7
CCDC144B-201ENST00000285176 MTX1Q13505 466 aa10.67□□□□□ -0.7
CCDC144B-201ENST00000285176 ZNF827Q17R98 1081 aa10.67□□□□□ -0.7
CCDC144B-201ENST00000285176 ZSCAN25Q6NSZ9 544 aa10.67□□□□□ -0.7
CCDC144B-201ENST00000285176 KIAA0825Q8IV33 1275 aa10.67□□□□□ -0.7
CCDC144B-201ENST00000285176 OSBP2Q969R2 916 aa10.67□□□□□ -0.7
CCDC144B-201ENST00000285176 NEK1Q96PY6 1258 aa10.67□□□□□ -0.7
CCDC144B-201ENST00000285176 MINPP1Q9UNW1 487 aa10.67□□□□□ -0.7
CCDC144B-201ENST00000285176 CYP2D7A0A087X1C5 515 aa10.67□□□□□ -0.7
CCDC144B-201ENST00000285176 H0YIN7 160 aa10.67□□□□□ -0.7
CCDC144B-201ENST00000285176 PRPF40AO75400 957 aaKnown RBP10.67□□□□□ -0.7
CCDC144B-201ENST00000285176 TCP10Q12799 353 aa10.67□□□□□ -0.7
CCDC144B-201ENST00000285176 PIH1D3Q9NQM4 214 aaKnown RBP10.67□□□□□ -0.7
CCDC144B-201ENST00000285176 GGA1Q9UJY5 639 aa10.67□□□□□ -0.7
CCDC144B-201ENST00000285176 SNX14Q9Y5W7 946 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms