RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ANKRD23Q86SG2 305 aa7.66□□□□□ -1.18
PDGFRA-201ENST00000257290 CACNA2D3Q8IZS8 1091 aa7.66□□□□□ -1.18
PDGFRA-201ENST00000257290 PRAM1Q96QH2 718 aa7.66□□□□□ -1.18
PDGFRA-201ENST00000257290 OATP04181 439 aa7.66□□□□□ -1.18
PDGFRA-201ENST00000257290 SSFA2P28290 1259 aa7.66□□□□□ -1.18
PDGFRA-201ENST00000257290 SYNE3Q6ZMZ3 975 aa7.66□□□□□ -1.18
PDGFRA-201ENST00000257290 TMC6Q7Z403 805 aa7.66□□□□□ -1.18
PDGFRA-201ENST00000257290 CFAP57Q96MR6 1250 aa7.66□□□□□ -1.18
PDGFRA-201ENST00000257290 MTUS1Q9ULD2 1270 aa7.66□□□□□ -1.18
PDGFRA-201ENST00000257290 PHACTR2O75167 634 aa7.65□□□□□ -1.18
PDGFRA-201ENST00000257290 NOP2P46087 812 aaKnown RBP7.65□□□□□ -1.18
PDGFRA-201ENST00000257290 GNPTABQ3T906 1256 aa7.65□□□□□ -1.18
PDGFRA-201ENST00000257290 SWT1Q5T5J6 900 aaKnown RBP7.65□□□□□ -1.18
PDGFRA-201ENST00000257290 CC2D1AQ6P1N0 951 aaPredicted RBP7.65□□□□□ -1.18
PDGFRA-201ENST00000257290 CCDC170Q8IYT3 715 aa7.65□□□□□ -1.18
PDGFRA-201ENST00000257290 LARSQ9P2J5 1176 aaKnown RBP7.65□□□□□ -1.18
PDGFRA-201ENST00000257290 ITM2BQ9Y287 266 aa7.65□□□□□ -1.18
PDGFRA-201ENST00000257290 TSC22D4Q9Y3Q8 395 aa7.65□□□□□ -1.18
PDGFRA-201ENST00000257290 MAGEA8P43361 318 aa7.65□□□□□ -1.18
PDGFRA-201ENST00000257290 ZNF483Q8TF39 744 aaPredicted RBP7.65□□□□□ -1.18
PDGFRA-201ENST00000257290 MTA3Q9BTC8 594 aa7.65□□□□□ -1.18
PDGFRA-201ENST00000257290 TMEM165Q9HC07 324 aa7.65□□□□□ -1.18
PDGFRA-201ENST00000257290 HOMER3Q9NSC5 361 aa7.65□□□□□ -1.18
PDGFRA-201ENST00000257290 RGL1Q9NZL6 768 aa7.65□□□□□ -1.18
PDGFRA-201ENST00000257290 DNAI1Q9UI46 699 aa7.65□□□□□ -1.18
PDGFRA-201ENST00000257290 CHD1O14646 1710 aa7.65□□□□□ -1.18
PDGFRA-201ENST00000257290 NUTM2FA1L443 756 aa7.65□□□□□ -1.18
PDGFRA-201ENST00000257290 TULP2O00295 520 aa7.65□□□□□ -1.18
PDGFRA-201ENST00000257290 PPFIA4O75335 1185 aa7.65□□□□□ -1.18
PDGFRA-201ENST00000257290 PPP2R1AP30153 589 aa7.65□□□□□ -1.18
PDGFRA-201ENST00000257290 ICA1Q05084 483 aa7.65□□□□□ -1.18
PDGFRA-201ENST00000257290 SLC44A4Q53GD3 710 aa7.65□□□□□ -1.18
PDGFRA-201ENST00000257290 ATP11CQ8NB49 1132 aa7.65□□□□□ -1.18
PDGFRA-201ENST00000257290 RBSNQ9H1K0 784 aa7.65□□□□□ -1.18
PDGFRA-201ENST00000257290 ARHGEF12Q9NZN5 1544 aa7.65□□□□□ -1.18
PDGFRA-201ENST00000257290 MATR3P43243 847 aaKnown RBP eCLIP7.65□□□□□ -1.19
PDGFRA-201ENST00000257290 E2F5Q15329 346 aa7.65□□□□□ -1.19
PDGFRA-201ENST00000257290 RASEFQ8IZ41 740 aa7.65□□□□□ -1.19
PDGFRA-201ENST00000257290 CCDC148Q8NFR7 591 aa7.65□□□□□ -1.19
PDGFRA-201ENST00000257290 LZICQ8WZA0 190 aa7.65□□□□□ -1.19
PDGFRA-201ENST00000257290 MAST1Q9Y2H9 1570 aa7.65□□□□□ -1.19
PDGFRA-201ENST00000257290 KDM1AO60341 852 aa7.65□□□□□ -1.19
PDGFRA-201ENST00000257290 CUL4BQ13620 913 aa7.65□□□□□ -1.19
PDGFRA-201ENST00000257290 KBTBD12Q3ZCT8 623 aa7.65□□□□□ -1.19
PDGFRA-201ENST00000257290 DZIP1LQ8IYY4 767 aaKnown RBP7.65□□□□□ -1.19
PDGFRA-201ENST00000257290 MIEF2Q96C03 454 aa7.65□□□□□ -1.19
PDGFRA-201ENST00000257290 SPATA17Q96L03 361 aa7.65□□□□□ -1.19
PDGFRA-201ENST00000257290 GPR101Q96P66 508 aaPredicted RBP7.65□□□□□ -1.19
PDGFRA-201ENST00000257290 FAF1Q9UNN5 650 aaPredicted RBP7.65□□□□□ -1.19
PDGFRA-201ENST00000257290 CBFA2T2O43439 604 aa7.64□□□□□ -1.19
PDGFRA-201ENST00000257290 ABL2P42684 1182 aa7.64□□□□□ -1.19
PDGFRA-201ENST00000257290 AATFQ9NY61 560 aaKnown RBP eCLIP7.64□□□□□ -1.19
PDGFRA-201ENST00000257290 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.64□□□□□ -1.19
PDGFRA-201ENST00000257290 CHMP2AO43633 222 aa7.64□□□□□ -1.19
PDGFRA-201ENST00000257290 SYCP3Q8IZU3 236 aa7.64□□□□□ -1.19
PDGFRA-201ENST00000257290 TNMDQ9H2S6 317 aa7.64□□□□□ -1.19
PDGFRA-201ENST00000257290 ELP1O95163 1332 aa7.64□□□□□ -1.19
PDGFRA-201ENST00000257290 KCNA2P16389 499 aa7.64□□□□□ -1.19
PDGFRA-201ENST00000257290 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.64□□□□□ -1.19
PDGFRA-201ENST00000257290 SPAG5Q96R06 1193 aa7.64□□□□□ -1.19
PDGFRA-201ENST00000257290 WDR33Q9C0J8 1336 aaKnown RBP7.64□□□□□ -1.19
PDGFRA-201ENST00000257290 PCYT1AP49585 367 aa7.64□□□□□ -1.19
PDGFRA-201ENST00000257290 HLTFQ14527 1009 aaKnown RBP eCLIP7.64□□□□□ -1.19
PDGFRA-201ENST00000257290 RCN1Q15293 331 aa7.64□□□□□ -1.19
PDGFRA-201ENST00000257290 ARFGAP2Q8N6H7 521 aa7.64□□□□□ -1.19
PDGFRA-201ENST00000257290 ATP7AQ04656 1500 aa7.64□□□□□ -1.19
PDGFRA-201ENST00000257290 MYZAPP0CAP1 466 aa7.64□□□□□ -1.19
PDGFRA-201ENST00000257290 HSP90AA5PQ58FG0 334 aa7.64□□□□□ -1.19
PDGFRA-201ENST00000257290 CCDC30Q5VVM6 783 aa7.64□□□□□ -1.19
PDGFRA-201ENST00000257290 CCDC144CPQ8IYA2 1237 aa7.64□□□□□ -1.19
PDGFRA-201ENST00000257290 KIAA1524Q8TCG1 905 aa7.64□□□□□ -1.19
PDGFRA-201ENST00000257290 SMARCE1Q969G3 411 aa7.64□□□□□ -1.19
PDGFRA-201ENST00000257290 ZNF653Q96CK0 615 aa7.64□□□□□ -1.19
PDGFRA-201ENST00000257290 IFT74Q96LB3 600 aa7.64□□□□□ -1.19
PDGFRA-201ENST00000257290 USH1CQ9Y6N9 552 aa7.64□□□□□ -1.19
PDGFRA-201ENST00000257290 PPFIBP1Q86W92 1011 aa7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 THOC1Q96FV9 657 aaKnown RBP7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 PALMDQ9NP74 551 aa7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 PFDN4Q9NQP4 134 aa7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 FLT3P36888 993 aa7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 CCDC158Q5M9N0 1113 aa7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 CCDC26Q8TAB7 109 aa7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 CDK19Q9BWU1 502 aa7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 ECM2O94769 699 aaPredicted RBP7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 PECAM1P16284 738 aaPredicted RBP7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 SLC8A3P57103 927 aa7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 ARPC4P59998 168 aa7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 CCT2P78371 535 aaKnown RBP7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 ATP2B2Q01814 1243 aa7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 MAP3K11Q16584 847 aa7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 SMC6Q96SB8 1091 aa7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 TEX13AQ9BXU3 409 aaPredicted RBP7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 PARVBQ9HBI1 364 aa7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 PRELID1Q9Y255 219 aa7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 NOS1P29475 1434 aa7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 GFAPP14136 432 aa7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 EVCP57679 992 aa7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 KCNA1Q09470 495 aa7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 VPS37AQ8NEZ2 397 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms