RNA–Protein interactions for RNA: ENST00000237889.8

NDUFB3-201, Transcript of NADH:ubiquinone oxidoreductase subunit B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFB3, Length 755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3-201ENST00000237889 WTIPA6NIX2 430 aaPredicted RBP12.72□□□□□ -0.37
NDUFB3-201ENST00000237889 IGF2BP3O00425 579 aaKnown RBP eCLIP12.72□□□□□ -0.37
NDUFB3-201ENST00000237889 GNRH1P01148 92 aa12.72□□□□□ -0.37
NDUFB3-201ENST00000237889 HSP90B1P14625 803 aaKnown RBP12.72□□□□□ -0.37
NDUFB3-201ENST00000237889 DCTN1Q14203 1278 aa12.72□□□□□ -0.37
NDUFB3-201ENST00000237889 NBPF9Q3BBW0 867 aa12.72□□□□□ -0.37
NDUFB3-201ENST00000237889 GMLQ99445 158 aa12.72□□□□□ -0.37
NDUFB3-201ENST00000237889 PRO3102Q9H379 93 aa12.72□□□□□ -0.37
NDUFB3-201ENST00000237889 ZFYVE28Q9HCC9 887 aa12.72□□□□□ -0.37
NDUFB3-201ENST00000237889 PODXL2Q9NZ53 605 aa12.72□□□□□ -0.37
NDUFB3-201ENST00000237889 PTCH2Q9Y6C5 1203 aa12.72□□□□□ -0.37
NDUFB3-201ENST00000237889 ZNF609O15014 1411 aa12.71□□□□□ -0.37
NDUFB3-201ENST00000237889 HTTP42858 3142 aa12.71□□□□□ -0.37
NDUFB3-201ENST00000237889 MYO3BQ8WXR4 1341 aa12.71□□□□□ -0.37
NDUFB3-201ENST00000237889 PRMT2P55345 433 aa12.71□□□□□ -0.37
NDUFB3-201ENST00000237889 EIF4A1P60842 406 aaKnown RBP12.71□□□□□ -0.37
NDUFB3-201ENST00000237889 SF3B3Q15393 1217 aaKnown RBP12.71□□□□□ -0.37
NDUFB3-201ENST00000237889 SUPT20HL1Q3ZLR7 823 aa12.71□□□□□ -0.37
NDUFB3-201ENST00000237889 CC2D1BQ5T0F9 858 aaKnown RBP12.71□□□□□ -0.37
NDUFB3-201ENST00000237889 DEFB123Q8N688 67 aa12.71□□□□□ -0.37
NDUFB3-201ENST00000237889 CELF1Q92879 486 aaKnown RBP12.71□□□□□ -0.37
NDUFB3-201ENST00000237889 WNK4Q96J92 1243 aa12.71□□□□□ -0.37
NDUFB3-201ENST00000237889 COL25A1Q9BXS0 654 aaPredicted RBP12.71□□□□□ -0.37
NDUFB3-201ENST00000237889 RSPH6AQ9H0K4 717 aa12.71□□□□□ -0.37
NDUFB3-201ENST00000237889 WNT10BO00744 389 aa12.7□□□□□ -0.38
NDUFB3-201ENST00000237889 COL6A3P12111 3177 aa12.69□□□□□ -0.38
NDUFB3-201ENST00000237889 CENPFP49454 3210 aa12.69□□□□□ -0.38
NDUFB3-201ENST00000237889 EVI5O60447 810 aa12.69□□□□□ -0.38
NDUFB3-201ENST00000237889 U2AF1L5P0DN76 240 aaPredicted RBP12.69□□□□□ -0.38
NDUFB3-201ENST00000237889 U2AF1Q01081 240 aaKnown RBP eCLIP12.69□□□□□ -0.38
NDUFB3-201ENST00000237889 MAP3K11Q16584 847 aa12.69□□□□□ -0.38
NDUFB3-201ENST00000237889 RANBP2P49792 3224 aaKnown RBP12.69□□□□□ -0.38
NDUFB3-201ENST00000237889 CLSPNQ9HAW4 1339 aa12.68□□□□□ -0.38
NDUFB3-201ENST00000237889 ZBTB7BO15156 539 aaPredicted RBP12.68□□□□□ -0.38
NDUFB3-201ENST00000237889 CAPN2P17655 700 aa12.68□□□□□ -0.38
NDUFB3-201ENST00000237889 IREB2P48200 963 aaKnown RBP12.68□□□□□ -0.38
NDUFB3-201ENST00000237889 SH3TC2Q8TF17 1288 aa12.68□□□□□ -0.38
NDUFB3-201ENST00000237889 LRCH3Q96II8 777 aa12.68□□□□□ -0.38
NDUFB3-201ENST00000237889 PPP2R3BQ9Y5P8 575 aa12.68□□□□□ -0.38
NDUFB3-201ENST00000237889 TESPA1A2RU30 521 aaPredicted RBP12.67□□□□□ -0.38
NDUFB3-201ENST00000237889 EIF2S2P20042 333 aaKnown RBP12.67□□□□□ -0.38
NDUFB3-201ENST00000237889 HOXD10P28358 340 aa12.67□□□□□ -0.38
NDUFB3-201ENST00000237889 AIMP1Q12904 312 aaKnown RBP12.67□□□□□ -0.38
NDUFB3-201ENST00000237889 COPS6Q7L5N1 327 aa12.67□□□□□ -0.38
NDUFB3-201ENST00000237889 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.67□□□□□ -0.38
NDUFB3-201ENST00000237889 DEFB129Q9H1M3 183 aa12.67□□□□□ -0.38
NDUFB3-201ENST00000237889 POLR2AP24928 1970 aaKnown RBP12.67□□□□□ -0.38
NDUFB3-201ENST00000237889 SIPA1L3O60292 1781 aaPredicted RBP12.66□□□□□ -0.38
NDUFB3-201ENST00000237889 SOX1O00570 391 aaPredicted RBP12.66□□□□□ -0.38
NDUFB3-201ENST00000237889 HSPA5P11021 654 aaKnown RBP12.66□□□□□ -0.38
NDUFB3-201ENST00000237889 ATP2B4P23634 1241 aa12.66□□□□□ -0.38
NDUFB3-201ENST00000237889 GJA8P48165 433 aa12.66□□□□□ -0.38
NDUFB3-201ENST00000237889 TAF1CQ15572 869 aaPredicted RBP12.66□□□□□ -0.38
NDUFB3-201ENST00000237889 STRIP1Q5VSL9 837 aa12.66□□□□□ -0.38
NDUFB3-201ENST00000237889 ANKRD13AQ8IZ07 590 aa12.66□□□□□ -0.38
NDUFB3-201ENST00000237889 HELBQ8NG08 1087 aaPredicted RBP12.66□□□□□ -0.38
NDUFB3-201ENST00000237889 FBXW7Q969H0 707 aa12.66□□□□□ -0.38
NDUFB3-201ENST00000237889 THUMPD2Q9BTF0 503 aaKnown RBP12.66□□□□□ -0.38
NDUFB3-201ENST00000237889 PRDM6Q9NQX0 595 aa12.66□□□□□ -0.38
NDUFB3-201ENST00000237889 SSUH2Q9Y2M2 353 aa12.66□□□□□ -0.38
NDUFB3-201ENST00000237889 BRCA2P51587 3418 aa12.65□□□□□ -0.38
NDUFB3-201ENST00000237889 DUOX1Q9NRD9 1551 aa12.65□□□□□ -0.38
NDUFB3-201ENST00000237889 MYO1BO43795 1136 aa12.65□□□□□ -0.38
NDUFB3-201ENST00000237889 GJB1P08034 283 aa12.65□□□□□ -0.38
NDUFB3-201ENST00000237889 FAM89AQ96GI7 184 aa12.65□□□□□ -0.38
NDUFB3-201ENST00000237889 CLMNQ96JQ2 1002 aa12.65□□□□□ -0.38
NDUFB3-201ENST00000237889 PTPN18Q99952 460 aa12.65□□□□□ -0.38
NDUFB3-201ENST00000237889 BIN2Q9UBW5 565 aaPredicted RBP12.65□□□□□ -0.38
NDUFB3-201ENST00000237889 STAP2Q9UGK3 403 aa12.65□□□□□ -0.38
NDUFB3-201ENST00000237889 XDHP47989 1333 aa12.64□□□□□ -0.39
NDUFB3-201ENST00000237889 RBBP6Q7Z6E9 1792 aaKnown RBP12.64□□□□□ -0.39
NDUFB3-201ENST00000237889 SASH1O94885 1247 aa12.64□□□□□ -0.39
NDUFB3-201ENST00000237889 GTF2A2P52657 109 aa12.64□□□□□ -0.39
NDUFB3-201ENST00000237889 UBXN2AP68543 259 aa12.64□□□□□ -0.39
NDUFB3-201ENST00000237889 IRS4O14654 1257 aaPredicted RBP12.63□□□□□ -0.39
NDUFB3-201ENST00000237889 FARP2O94887 1054 aaPredicted RBP12.63□□□□□ -0.39
NDUFB3-201ENST00000237889 BMP8BP34820 402 aa12.63□□□□□ -0.39
NDUFB3-201ENST00000237889 DLGAP5Q15398 846 aa12.63□□□□□ -0.39
NDUFB3-201ENST00000237889 DACT2Q5SW24 774 aa12.63□□□□□ -0.39
NDUFB3-201ENST00000237889 RAET1EQ8TD07 263 aa12.63□□□□□ -0.39
NDUFB3-201ENST00000237889 XAGE3Q8WTP9 111 aa12.63□□□□□ -0.39
NDUFB3-201ENST00000237889 TRIM47Q96LD4 638 aa12.63□□□□□ -0.39
NDUFB3-201ENST00000237889 RNF208Q9H0X6 261 aa12.63□□□□□ -0.39
NDUFB3-201ENST00000237889 COL1A1P02452 1464 aaPredicted RBP12.62□□□□□ -0.39
NDUFB3-201ENST00000237889 LACTBP83111 547 aaPredicted RBP12.62□□□□□ -0.39
NDUFB3-201ENST00000237889 CNGB1Q14028 1251 aaPredicted RBP12.62□□□□□ -0.39
NDUFB3-201ENST00000237889 PDIA6Q15084 440 aa12.62□□□□□ -0.39
NDUFB3-201ENST00000237889 CCDC152Q4G0S7 254 aa12.62□□□□□ -0.39
NDUFB3-201ENST00000237889 LRP10Q7Z4F1 713 aa12.62□□□□□ -0.39
NDUFB3-201ENST00000237889 OPTNQ96CV9 577 aa12.62□□□□□ -0.39
NDUFB3-201ENST00000237889 COA1Q9GZY4 146 aa12.62□□□□□ -0.39
NDUFB3-201ENST00000237889 MTMR10Q9NXD2 777 aa12.62□□□□□ -0.39
NDUFB3-201ENST00000237889 NUP98P52948 1817 aa12.62□□□□□ -0.39
NDUFB3-201ENST00000237889 CCL15-CCL14A0A0B4J2E2 113 aa12.61□□□□□ -0.39
NDUFB3-201ENST00000237889 PER1O15534 1290 aaPredicted RBP12.61□□□□□ -0.39
NDUFB3-201ENST00000237889 TLR2O60603 784 aa12.61□□□□□ -0.39
NDUFB3-201ENST00000237889 GRK4P32298 578 aa12.61□□□□□ -0.39
NDUFB3-201ENST00000237889 MTFR1Q15390 333 aa12.61□□□□□ -0.39
NDUFB3-201ENST00000237889 CCL15Q16663 113 aa12.61□□□□□ -0.39
NDUFB3-201ENST00000237889 LRIT3Q3SXY7 679 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms