RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 ImmtQ8CAQ8 757 aaKnown RBP28.28■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Rtn4Q99P72 1162 aaKnown RBP28.28■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Pald1P70261 859 aa28.28■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Adam1bQ8R534 806 aa28.28■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Zbtb1Q91VL9 713 aa28.28■■■□□ 2.12
Ubp1-203ENSMUST00000116492 1700113H08RikE9Q9Q5 327 aa28.27■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Gm29094F6Q785 221 aa28.27■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Il17raQ60943 864 aa28.27■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Nxf7Q80SZ6 620 aaKnown RBP28.27■■■□□ 2.12
Ubp1-203ENSMUST00000116492 MthfsQ9D110 203 aa28.27■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Ube3bQ9ES34 1070 aa28.27■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Nwd2Q6P5U7 1742 aa28.27■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Anxa1P10107 346 aaKnown RBP28.27■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Tpm2P58774 284 aa28.27■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Hvcn1Q3U2S8 269 aa28.27■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Ift57Q8BXG3 429 aa28.27■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Ddx54Q8K4L0 874 aaKnown RBP28.27■■■□□ 2.12
Ubp1-203ENSMUST00000116492 IncenpQ9WU62 880 aa28.27■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Cfap58B2RW38 873 aa28.26■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Zkscan7E9PVW1 718 aa28.26■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Rgs9O54828 675 aa28.26■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Exoc5Q3TPX4 708 aa28.26■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Pnma3Q8JZW8 466 aa28.26■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Bicd2Q921C5 820 aa28.26■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Foxo4Q9WVH3 505 aa28.26■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Wdr19Q3UGF1 1341 aa28.26■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Trim34bJ3QNR8 485 aa28.25■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Lnx1O70263 728 aa28.25■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Tyro3P55144 880 aa28.25■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Rab3gap1Q80UJ7 981 aa28.25■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Fbxo3Q9DC63 480 aa28.25■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Myh7Q91Z83 1935 aa28.25■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Kndc1Q0KK55 1742 aa28.25■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Cfap157Q0VFX2 523 aa28.24■■■□□ 2.11
Ubp1-203ENSMUST00000116492 ErmnQ5EBJ4 281 aa28.24■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Nlrp9aQ66X03 949 aa28.24■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Tbc1d31Q6NXY1 996 aa28.24■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Mx2Q9WVP9 655 aa28.24■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Prl3d1P18121 224 aa28.23■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Shisa4Q8CA71 197 aa28.23■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Lrrc59Q922Q8 307 aaKnown RBP28.23■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Sh3bgrQ9WUZ7 214 aa28.23■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Usp28Q5I043 1051 aa28.22■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Itga6Q61739 1091 aa28.22■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Myh1Q5SX40 1942 aa28.22■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Pde8bE9Q4S1 865 aa28.22■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Plbd2Q3TCN2 594 aa28.22■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Tmem109Q3UBX0 243 aa28.22■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Hand2Q61039 217 aa28.22■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Cyp7a1Q64505 503 aa28.22■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Col3a1P08121 1464 aa28.21■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Sept1P42209 366 aa28.21■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Rapgef4Q9EQZ6 1011 aa28.21■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Mmel1Q9JLI3 765 aa28.21■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Ccdc112A0AUP1 442 aa28.21■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Cspp1B2RX88 1205 aa28.21■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Mctp1E9PV86 951 aa28.21■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Gzf1Q4VBD9 706 aa28.21■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Cep55Q8BT07 462 aa28.21■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Alx1Q8C8B0 326 aa28.21■■■□□ 2.11
Ubp1-203ENSMUST00000116492 Bin2D3Z6Q9 489 aa28.2■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Slc38a10Q5I012 1090 aa28.2■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Ifit1Q64282 463 aa28.2■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Gimap5Q8BWF2 308 aa28.2■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Ercc3P49135 783 aa28.19■■■□□ 2.1
Ubp1-203ENSMUST00000116492 LyarQ08288 388 aaKnown RBP28.19■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Edrf1Q6GQV7 1239 aa28.19■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Cdca8Q8BHX3 289 aa28.19■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Ankrd31A0A140LI88 1765 aa28.19■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Setdb1O88974 1307 aa28.19■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Lrp5Q91VN0 1614 aa28.19■■■□□ 2.1
Ubp1-203ENSMUST00000116492 FosbP13346 338 aa28.18■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Nfe2l3Q9WTM4 660 aa28.18■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Prr5lA2AVJ5 370 aa28.18■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Cep63Q3UPP8 700 aa28.18■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Sptlc3Q8BG54 563 aa28.18■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Pcdhb22Q91XZ8 794 aa28.18■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Sall1Q9ER74 1322 aa28.18■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Znf326O88291 580 aa28.17■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Ccdc82Q6PG04 518 aa28.17■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Abtb2Q7TQI7 1024 aa28.17■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Plcd3Q8K2J0 785 aa28.17■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Plekho1Q9JIY0 408 aa28.17■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Plekhf1Q3TB82 279 aa28.16■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Ybx3Q9JKB3 361 aaKnown RBP28.16■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Prr29B1ARI9 187 aa28.16■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Pcdhb9E9Q5G2 828 aa28.16■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Tmem59lQ7TNI2 337 aa28.16■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Emilin1Q99K41 1017 aa28.16■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Hmgn5Q9JL35 406 aa28.16■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Cfap99A0A140LIX9 648 aa28.15■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Ankrd23Q812A3 306 aa28.15■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Odf2lQ9D478 642 aa28.15■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Col4a3bpQ9EQG9 624 aa28.15■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Brpf3B2KF05 1204 aaKnown RBP28.15■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Vmn2r23E9PXI5 849 aa28.15■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Tpm3P21107 285 aaKnown RBP28.15■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Kif3aP28741 701 aa28.15■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Nme8Q715T0 586 aa28.15■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Fsd2Q8BZ52 692 aa28.15■■■□□ 2.1
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms