RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Plxnc1Q9QZC2 1574 aa10.16□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Mroh1E0CZ22 1640 aa10.16□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Klhl34A2AI76 644 aa10.16□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Cavin2Q63918 418 aaKnown RBP10.16□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Abcf1Q6P542 837 aaKnown RBP10.16□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Recql4Q75NR7 1216 aaKnown RBP10.16□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Dnaaf2Q8BPI1 814 aa10.16□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Luzp1Q8R4U7 1068 aaKnown RBP10.16□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Gdap1l1Q8VE33 370 aa10.16□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Topbp1Q6ZQF0 1515 aa10.16□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Dnai2A2AC93 623 aa10.16□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Eif5P59325 429 aaKnown RBP10.16□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Rreb1Q3UH06 1700 aaKnown RBP10.16□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Fbxo41Q6NS60 873 aa10.16□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Ltv1Q6NSQ7 470 aaKnown RBP10.16□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Spata32Q8C5V0 334 aa10.16□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Brf1Q8CFK2 676 aa10.16□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Bmp2kQ91Z96 1138 aa10.16□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Bin1O08539 588 aaKnown RBP10.15□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Tm6sf1P58749 370 aa10.15□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Cep112Q5PR68 954 aa10.15□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Agtpbp1Q641K1 1218 aa10.15□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Tti2Q8BGV4 512 aa10.15□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Cgref1Q8R1U2 281 aa10.15□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Mlh1Q9JK91 760 aa10.15□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Adamts13Q769J6 1426 aa10.15□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Nphp3Q7TNH6 1325 aa10.15□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Elmsan1E9Q2I4 1089 aaKnown RBP10.15□□□□□ -0.78
Col28a1-201ENSMUST00000115537 GmnnO88513 206 aa10.15□□□□□ -0.78
Col28a1-201ENSMUST00000115537 GalcP54818 684 aa10.15□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Aifm3Q3TY86 605 aa10.15□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Ccdc114Q3UX62 658 aa10.15□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Dbndd1Q9CZ00 160 aa10.15□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Qser1A2BIE1 1698 aa10.15□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Atp8b3Q6UQ17 1335 aa10.15□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Grm8P47743 908 aa10.15□□□□□ -0.78
Col28a1-201ENSMUST00000115537 SfswapQ3USH5 945 aaKnown RBP10.15□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Rnf187Q8BFX1 236 aa10.15□□□□□ -0.78
Col28a1-201ENSMUST00000115537 HmcesQ8R1M0 353 aaKnown RBP10.15□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Tceanc2Q8R2M0 207 aa10.15□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Tecpr2Q3UH45 1423 aa10.15□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Exoc3l2D3YUP5 789 aa10.15□□□□□ -0.79
Col28a1-201ENSMUST00000115537 CltaO08585 235 aa10.15□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Hoxa7P02830 229 aa10.15□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Mcm5P49718 733 aa10.15□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Tmem143Q8VD26 458 aa10.15□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Stk38Q91VJ4 465 aa10.15□□□□□ -0.79
Col28a1-201ENSMUST00000115537 ChmQ9QXG2 665 aa10.15□□□□□ -0.79
Col28a1-201ENSMUST00000115537 IncenpQ9WU62 880 aa10.15□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Kifc2O08672 792 aa10.14□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Eif4a1P60843 406 aaKnown RBP10.14□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Fam213aQ9CYH2 218 aa10.14□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Bcl2l12Q9D3J3 255 aa10.14□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Prr29B1ARI9 187 aa10.14□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Stox1B2RQL2 990 aa10.14□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Terf1P70371 421 aa10.14□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Cfap69Q8BH53 942 aa10.14□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Etf1Q8BWY3 437 aaKnown RBP10.14□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Tsr2Q8C8T8 191 aa10.14□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Kcnk13Q8R1P5 405 aa10.14□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Ccdc12Q8R344 166 aaKnown RBP10.14□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Clec11aO88200 328 aa10.14□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Syde2E9PUP1 1314 aa10.13□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Cfap99A0A140LIX9 648 aa10.13□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Ccdc186Q8C9S4 917 aa10.13□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Tubb6Q922F4 447 aa10.13□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Rufy3Q9D394 469 aa10.13□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Znf18Q810A1 556 aa10.13□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Synpo2Q91YE8 1087 aaKnown RBP10.13□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Ccdc7Q9D541 371 aa10.13□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Foxo3Q9WVH4 672 aa10.13□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Cops6O88545 324 aa10.13□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Leo1Q5XJE5 667 aa10.13□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Ccdc93Q7TQK5 629 aa10.13□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Efcab8Q8C9R9 203 aa10.13□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Evc2Q8K1G2 1220 aa10.13□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Sde2Q8K1J5 448 aaKnown RBP10.13□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Zbtb1Q91VL9 713 aa10.13□□□□□ -0.79
Col28a1-201ENSMUST00000115537 CpvlQ9D3S9 478 aa10.13□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Ube2oQ6ZPJ3 1288 aa10.12□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Ccp110Q7TSH4 1004 aa10.12□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Plcd1Q8R3B1 756 aa10.12□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Plekho1Q9JIY0 408 aa10.12□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Plcb3P51432 1234 aaKnown RBP10.12□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Atp1b3P97370 278 aa10.12□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Fam107bQ3TGF2 131 aa10.12□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Cdca8Q8BHX3 289 aa10.12□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Brms1Q99N20 246 aa10.12□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Mis12Q9CY25 206 aa10.12□□□□□ -0.79
Col28a1-201ENSMUST00000115537 ParvgQ9ERD8 331 aa10.12□□□□□ -0.79
Col28a1-201ENSMUST00000115537 AceP09470 1312 aa10.12□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Atp6v1aP50516 617 aaKnown RBP10.12□□□□□ -0.79
Col28a1-201ENSMUST00000115537 IntuQ059U7 942 aa10.12□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Acbd5Q5XG73 508 aa10.12□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Atp1a2Q6PIE5 1020 aa10.12□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Rufy1Q8BIJ7 712 aa10.12□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Mtmr3Q8K296 1196 aa10.12□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Stxbp4Q9WV89 557 aa10.12□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Pdcd11Q6NS46 1862 aaKnown RBP10.12□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Ccdc112A0AUP1 442 aa10.12□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms