RNA–Protein interactions for RNA: ENSMUST00000111044.2

Bdnf-204, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,854 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-204ENSMUST00000111044 Myo1aO88329 1043 aa8.6□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Kifap3P70188 793 aa8.6□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Nop2Q922K7 793 aaKnown RBP8.6□□□□□ -1.03
Bdnf-204ENSMUST00000111044 RabggtaQ9JHK4 567 aa8.6□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Cnbd1B1AWM0 430 aa8.6□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Cct5P80316 541 aaKnown RBP8.6□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Gtf2f1Q3THK3 508 aaKnown RBP8.6□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Limch1Q3UH68 1057 aa8.6□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Bbof1Q3V079 533 aa8.6□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Clul1Q3ZRW6 464 aa8.6□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Stk11Q9WTK7 436 aa8.6□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Cfap99A0A140LIX9 648 aa8.59□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Mcm10Q0VBD2 885 aa8.59□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Rassf8Q8CJ96 419 aa8.59□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Paip2Q9D6V8 124 aa8.59□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Klc4Q9DBS5 619 aa8.59□□□□□ -1.03
Bdnf-204ENSMUST00000111044 PhaxQ9JJT9 385 aaKnown RBP8.59□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Add2Q9QYB8 725 aa8.59□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Stk36Q69ZM6 1316 aa8.59□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Bin1O08539 588 aaKnown RBP8.59□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Ccdc33Q3ULW6 985 aa8.59□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Zbtb40Q6PCS8 1258 aa8.59□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Me3Q8BMF3 604 aa8.59□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Cd209bQ8CJ91 325 aa8.59□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Tmc2Q8R4P4 888 aa8.59□□□□□ -1.03
Bdnf-204ENSMUST00000111044 TxlnbQ8VBT1 685 aa8.59□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Pcdhb15Q91Y04 786 aa8.59□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Lnx1O70263 728 aa8.59□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Usp28Q5I043 1051 aa8.59□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Trim28Q62318 834 aa8.59□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Ppfibp1Q8C8U0 969 aaKnown RBP8.59□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Polr3dQ91WD1 398 aa8.59□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Cdca7lQ922M5 438 aa8.59□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Card14Q99KF0 999 aa8.59□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Trim30cD3YVI9 513 aa8.58□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Sh3gl3Q62421 347 aa8.58□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Fmnl3Q6ZPF4 1028 aa8.58□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Ppp1r10Q80W00 888 aaKnown RBP8.58□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Kiaa1524Q8BWY9 907 aa8.58□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Kri1Q8VDQ9 704 aaKnown RBP8.58□□□□□ -1.04
Bdnf-204ENSMUST00000111044 RpainQ9CWY9 219 aa8.58□□□□□ -1.04
Bdnf-204ENSMUST00000111044 PdclQ9DBX2 301 aa8.58□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Rsrc2A2RTL5 376 aaKnown RBP8.58□□□□□ -1.04
Bdnf-204ENSMUST00000111044 NpcdF8VQB8 469 aa8.58□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Zmym1Q3TJB1 983 aa8.58□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Pip4k2bQ80XI4 416 aa8.58□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Idi2Q8BFZ6 227 aa8.58□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Trerf1Q8BXJ2 1205 aa8.58□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Ak2Q9WTP6 239 aa8.58□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Hmg20bQ9Z104 317 aa8.58□□□□□ -1.04
Bdnf-204ENSMUST00000111044 IghaA0A0A6YXW6 389 aa8.58□□□□□ -1.04
Bdnf-204ENSMUST00000111044 ErmnQ5EBJ4 281 aa8.58□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Acsbg1Q99PU5 721 aa8.58□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Mrpl44Q9CY73 333 aaKnown RBP8.58□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Slc5a4aQ9ET37 656 aa8.58□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Pkp1P97350 728 aaKnown RBP8.57□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Washc4Q3UMB9 1173 aa8.57□□□□□ -1.04
Bdnf-204ENSMUST00000111044 PsdQ5DTT2 1024 aa8.57□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Slc30a9Q5IRJ6 567 aa8.57□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Fchsd1Q6PFY1 688 aa8.57□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Ddx58Q6Q899 926 aa8.57□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Larp1Q6ZQ58 1072 aaKnown RBP8.57□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Rufy1Q8BIJ7 712 aa8.57□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Iqcb1Q8BP00 598 aa8.57□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Tceanc2Q8R2M0 207 aa8.57□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Ppp4r3bQ922R5 820 aa8.57□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Amotl1Q9D4H4 968 aa8.57□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Kif20bQ80WE4 1774 aaKnown RBP8.57□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Rnf40Q3U319 1001 aa8.57□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Rnf187Q8BFX1 236 aa8.57□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Rps6kb1Q8BSK8 525 aa8.57□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Fut8Q9WTS2 575 aa8.57□□□□□ -1.04
Bdnf-204ENSMUST00000111044 CltcQ68FD5 1675 aaKnown RBP8.57□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Dnajc21E9Q8D0 531 aa8.57□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Rnaseh1O70338 285 aa8.57□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Myo1bP46735 1107 aa8.57□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Eif5P59325 429 aaKnown RBP8.57□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Golph3lQ8R088 285 aaKnown RBP8.57□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Arl8aQ8VEH3 186 aa8.57□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Col4a3bpQ9EQG9 624 aa8.57□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Aox2Q5SGK3 1345 aa8.57□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Plekhg1F6S200 1446 aa8.57□□□□□ -1.04
Bdnf-204ENSMUST00000111044 A0A0U1RNP2 1173 aa8.56□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Hnrnph1O35737 449 aaKnown RBP8.56□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Mnat1P51949 309 aa8.56□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Cdc23Q8BGZ4 597 aa8.56□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Q8C1R3 189 aa8.56□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Spats2Q8K1N4 545 aaKnown RBP8.56□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Atp1a3Q6PIC6 1013 aa8.56□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Prkag3Q8BGM7 489 aa8.56□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Erlin1Q91X78 346 aa8.56□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Myo3bQ1EG27 1305 aa8.56□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Kif13aQ9EQW7 1749 aa8.56□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Gm10471E9Q1C7 252 aa8.56□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Gm21671G3UY31 267 aa8.56□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Diaph1O08808 1255 aa8.56□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Tmem109Q3UBX0 243 aa8.56□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Ccne1Q61457 408 aa8.56□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Klhl30Q8C3F7 581 aa8.56□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Nek9Q8K1R7 984 aa8.56□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms