RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Otud6bQ8K2H2 294 aa13.33□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Bmp2kQ91Z96 1138 aa13.33□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Erc1Q99MI1 1120 aa13.33□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Sytl4Q9R0Q1 673 aa13.33□□□□□ -0.27
Ddx55-201ENSMUST00000071057 IncenpQ9WU62 880 aa13.33□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Ccne2Q9Z238 404 aa13.33□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Ric1Q69ZJ7 1422 aa13.33□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Sipa1l3G3X9J0 1776 aa13.33□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Syce3B5KM66 88 aa13.33□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Cyp7a1Q64505 503 aa13.33□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Ciao1Q99KN2 339 aa13.33□□□□□ -0.28
Ddx55-201ENSMUST00000071057 MetP16056 1379 aa13.33□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Irgm2A0A140LIF8 407 aa13.32□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Tom1O88746 492 aa13.32□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Fnbp4Q6ZQ03 1031 aa13.32□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Bsdc1Q80Y55 427 aa13.32□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Tmem266Q8BZB3 538 aa13.32□□□□□ -0.28
Ddx55-201ENSMUST00000071057 DpydQ8CHR6 1025 aa13.32□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Rapgef4Q9EQZ6 1011 aa13.32□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Mast2Q60592 1734 aa13.32□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Ssc5dQ8BV57 1371 aa13.32□□□□□ -0.28
Ddx55-201ENSMUST00000071057 1700006A11RikB9EHI3 544 aa13.32□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Bank1Q80VH0 783 aa13.32□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Trim56Q80VI1 734 aaKnown RBP13.32□□□□□ -0.28
Ddx55-201ENSMUST00000071057 SnrkQ8VDU5 748 aa13.32□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Trim44Q9QXA7 346 aa13.32□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Mad1l1Q9WTX8 717 aaKnown RBP13.32□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Hmg20bQ9Z104 317 aa13.32□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Prr5lA2AVJ5 370 aa13.32□□□□□ -0.28
Ddx55-201ENSMUST00000071057 RubcnlQ3TD16 648 aa13.32□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Naa30Q8CES0 364 aa13.32□□□□□ -0.28
Ddx55-201ENSMUST00000071057 4931400O07RikQ9D4M5 137 aa13.32□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Cep83Q9D5R3 692 aa13.32□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Capn2O08529 700 aa13.31□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Sf3b2Q3UJB0 878 aaKnown RBP13.31□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Isy1Q69ZQ2 285 aaKnown RBP13.31□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Mknk2Q8CDB0 459 aa13.31□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Ccar2Q8VDP4 922 aaKnown RBP13.31□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Plcb3P51432 1234 aaKnown RBP13.31□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Dhx16G3X8X0 1044 aaKnown RBP13.3□□□□□ -0.28
Ddx55-201ENSMUST00000071057 TsksO54887 585 aa13.3□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Slf2Q6P9P0 1278 aa13.3□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Rdm1Q9CQK3 281 aa13.3□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Abca3Q8R420 1704 aa13.3□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Ppfia3P60469 1194 aa13.3□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Atp2b3Q0VF55 1220 aa13.3□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Ctdnep1Q3TP92 244 aa13.3□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Klra5Q60652 266 aa13.3□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Pm20d1Q8C165 503 aa13.3□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Myh1Q5SX40 1942 aa13.29□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Gm973E9Q295 1059 aa13.29□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Dctn1O08788 1281 aa13.29□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Eef2kO08796 724 aa13.29□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Hspd1P63038 573 aaKnown RBP13.29□□□□□ -0.28
Ddx55-201ENSMUST00000071057 VeztQ3ZK22 780 aa13.29□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Usp44Q8C2S0 711 aa13.29□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Ccdc158Q8CDI6 1109 aa13.29□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Klc3Q91W40 508 aa13.29□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Bicdl1A0JNT9 577 aa13.29□□□□□ -0.28
Ddx55-201ENSMUST00000071057 FanccP50652 591 aa13.29□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Itga6Q61739 1091 aa13.29□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Ccdc66Q6NS45 935 aa13.29□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Kcnq3Q8K3F6 873 aa13.29□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Iffo2Q8R2V2 512 aa13.29□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Bin2D3Z6Q9 489 aa13.28□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Kif4P33174 1231 aa13.28□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Hand2Q61039 217 aa13.28□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Esco1Q69Z69 843 aa13.28□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Ptcd1Q8C2E4 695 aaKnown RBP13.28□□□□□ -0.28
Ddx55-201ENSMUST00000071057 AidaQ8C4Q6 305 aa13.28□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Npc1l1Q6T3U4 1333 aa13.28□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Trim34bJ3QNR8 485 aa13.28□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Rnf214Q8BFU3 668 aaKnown RBP13.28□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Foxo4Q9WVH3 505 aa13.28□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Arap2Q8BZ05 1703 aa13.28□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Pus7B7ZNL8 666 aaKnown RBP13.27□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Cyp3a57D3YYZ0 503 aa13.27□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Atp8a2P98200 1148 aa13.27□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Me3Q8BMF3 604 aa13.27□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Tmem67Q8BR76 992 aa13.27□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Zbtb22Q9Z0G7 638 aa13.27□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Nwd2Q6P5U7 1742 aa13.27□□□□□ -0.28
Ddx55-201ENSMUST00000071057 Wdr93Q402B2 695 aa13.27□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Spty2d1Q68FG3 682 aa13.27□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Susd4Q8BH32 490 aa13.27□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Trim34aQ99PP6 485 aa13.27□□□□□ -0.29
Ddx55-201ENSMUST00000071057 FosbP13346 338 aa13.26□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Pcmtd1P59913 357 aa13.26□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Kdm3aQ6PCM1 1323 aa13.26□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Cyp2c23E9Q5K4 494 aa13.26□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Ms4a1P19437 291 aa13.26□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Stat1P42225 749 aa13.26□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Slc20a2Q80UP8 656 aa13.26□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Bloc1s2Q9CWG9 143 aa13.26□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Sugt1Q9CX34 336 aa13.26□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Trip6Q9Z1Y4 480 aa13.26□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Lrp6O88572 1613 aa13.26□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Fer1l6E0CZ42 1862 aa13.26□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Ifit1bl2Q3U687 466 aa13.26□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Nlrp9aQ66X03 949 aa13.26□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms