RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 GphnQ8BUV3 769 aaKnown RBP16.53■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Matr3Q8K310 846 aaKnown RBP16.53■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Cib2Q9Z309 187 aa16.53■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 CltaO08585 235 aa16.53■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Ppfia3P60469 1194 aa16.53■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Sun3Q5SS91 320 aa16.53■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Cfap69Q8BH53 942 aa16.53■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Ddx54Q8K4L0 874 aaKnown RBP16.53■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Galntl5Q9D4M9 431 aa16.53■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 RpgrQ9R0X5 1001 aa16.53■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Erich3F6QRE9 1637 aa16.53■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Chpf2Q3UU43 768 aa16.53■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Ublcp1Q8BGR9 318 aa16.53■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Atp12aQ9Z1W8 1035 aa16.53■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Fchsd1Q6PFY1 688 aa16.52■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Tmem266Q8BZB3 538 aa16.52■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Pak2Q8CIN4 524 aa16.52■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Gle1Q8R322 699 aa16.52■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Terf2ipQ91VL8 393 aa16.52■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Znf287Q9EQB9 759 aa16.52■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Igf1rQ60751 1373 aa16.52■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Card6E9PWH2 1175 aa16.52■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 PsdQ5DTT2 1024 aa16.52■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Spa17Q62252 149 aa16.52■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Asic3Q6X1Y6 530 aa16.52■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Tcp11l1Q8BTG3 509 aa16.52■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Amotl1Q9D4H4 968 aa16.52■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Tbc1d4Q8BYJ6 1307 aa16.52■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Eef1dP57776 281 aaKnown RBP16.52■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Sox13Q04891 613 aa16.52■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Ltv1Q6NSQ7 470 aaKnown RBP16.52■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Apol7aB2RT54 418 aa16.52■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Pdlim2Q8R1G6 349 aa16.52■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Ddx41Q91VN6 622 aaKnown RBP16.52■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Gbp7Q91Z40 638 aa16.52■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Col4a3bpQ9EQG9 624 aa16.52■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Ccdc170D3YXL0 722 aa16.51■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Zfp213E9QAW0 468 aa16.51■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Hgh1Q8C3I8 393 aa16.51■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 SltmQ8CH25 1031 aaKnown RBP16.51■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Vps36Q91XD6 386 aa16.51■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Itgb1bp2Q9R000 350 aa16.51■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Cdr1E9Q0B4 517 aa16.51■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Krt77Q6IFZ6 572 aa16.51■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Gm21698A0A087WQP8 267 aa16.51■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Gm21663A0A0G2JE01 267 aa16.51■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Gm7347D3YYI9 267 aa16.51■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 5031410I06RikE9Q4E0 267 aa16.51■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Serpinc1P32261 465 aa16.51■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Map3k2Q61083 619 aa16.51■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Cyp4f39Q8BGU0 532 aa16.51■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Krt79Q8VED5 531 aa16.51■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 AatfQ9JKX4 526 aaKnown RBP16.51■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Cbfa2t2O70374 594 aa16.51■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Diaph2O70566 1098 aa16.51■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 FanccP50652 591 aa16.51■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Plcb3P51432 1234 aaKnown RBP16.51■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Stmn2P55821 179 aa16.51■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Psmb7P70195 277 aa16.51■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Cnnm2Q3TWN3 875 aa16.51■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Luc7l3Q5SUF2 432 aaKnown RBP16.51■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Krt25Q8VCW2 446 aa16.51■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Gkap1Q9JMB0 366 aa16.51■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Cdk13Q69ZA1 1511 aaKnown RBP16.5■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Drc1Q3USS3 753 aa16.5■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Gas2l2Q5SSG4 860 aa16.5■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Kiaa1328Q6NZK5 612 aa16.5■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 4930572O03RikQ8C5Y0 211 aa16.5■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Lman1Q9D0F3 517 aa16.5■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Myom2Q14BI5 1463 aa16.5■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Krt15Q61414 452 aa16.5■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Swap70Q6A028 585 aaKnown RBP16.5■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 LgsnQ8CIX8 563 aa16.5■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Osbpl1aQ91XL9 950 aa16.5■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Rapgef6Q5NCJ1 1609 aa16.5■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 F2rP30558 430 aa16.5■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Surf6P70279 355 aaKnown RBP16.5■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Pabpn1lQ5XFR0 273 aa16.5■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Card14Q99KF0 999 aa16.5■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Mlh1Q9JK91 760 aa16.5■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Sall3Q62255 1320 aa16.5■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Supt6hQ62383 1726 aaKnown RBP16.5■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Gm5624F6ZZG8 207 aa16.5■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Mmp8O70138 465 aa16.5■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Zfp42P22227 288 aa16.5■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Hirip3Q8BLH7 601 aa16.5■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Rbbp5Q8BX09 538 aaKnown RBP16.5■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Kif2bQ8C0N1 668 aa16.5■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Cdan1Q8CC12 1239 aa16.5■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Tm6sf1P58749 370 aa16.49■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Cfap100Q80VN0 613 aa16.49■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Taok3Q8BYC6 898 aa16.49■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Acsbg1Q99PU5 721 aa16.49■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Angptl3Q9R182 455 aa16.49■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Gjc1P28229 396 aa16.49■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Cracr2aQ3UP38 310 aa16.49■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Efhd1Q9D4J1 240 aa16.49■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Ankrd35E9Q9D8 996 aa16.49■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Psmd1Q3TXS7 953 aa16.49■□□□□ 0.23
Pcdha1-201ENSMUST00000070797 Fhdc1Q3ULZ2 1149 aa16.49■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms