RNA–Protein interactions for RNA: ENSMUST00000058579.6

Ddx28-201, Transcript of Probable ATP-dependent RNA helicase DDX28, mousemouse

APPRIS P1 BASIC

Gene Ddx28, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28-201ENSMUST00000058579 Col4a3bpQ9EQG9 624 aa20.21■□□□□ 0.83
Ddx28-201ENSMUST00000058579 Npc1l1Q6T3U4 1333 aa20.21■□□□□ 0.83
Ddx28-201ENSMUST00000058579 Ank1Q02357 1862 aa20.21■□□□□ 0.83
Ddx28-201ENSMUST00000058579 Gsdma2Q32M21 443 aa20.2■□□□□ 0.82
Ddx28-201ENSMUST00000058579 CtifQ6PEE2 600 aaKnown RBP20.2■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Ncaph2Q8BSP2 607 aa20.2■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Acsbg1Q99PU5 721 aa20.2■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Cyp2d34L7N463 504 aa20.2■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Eya2O08575 532 aa20.2■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Ccdc82Q6PG04 518 aa20.2■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Atp1a3Q6PIC6 1013 aa20.2■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Tmem266Q8BZB3 538 aa20.2■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Fam13bQ8K2H3 851 aa20.2■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Dusp10Q9ESS0 483 aa20.2■□□□□ 0.82
Ddx28-201ENSMUST00000058579 AK157302I3ITR1 129 aa20.19■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Ano10Q8BH79 659 aa20.19■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Smc4Q8CG47 1286 aa20.19■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Isca1Q9D924 129 aa20.19■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Asap2Q7SIG6 958 aa20.19■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Tmem67Q8BR76 992 aa20.19■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Nlrp3Q8R4B8 1033 aa20.19■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Ccer1Q9CQL2 403 aa20.19■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Abca3Q8R420 1704 aa20.19■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Myd88P22366 296 aa20.18■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Ercc3P49135 783 aa20.18■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Trim56Q80VI1 734 aaKnown RBP20.18■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Hnrnpul1Q8VDM6 859 aaKnown RBP20.18■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Fam84aQ9D650 292 aa20.18■□□□□ 0.82
Ddx28-201ENSMUST00000058579 LyarQ08288 388 aaKnown RBP20.17■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Spty2d1Q68FG3 682 aa20.17■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Kiaa0754Q69ZZ9 979 aa20.17■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Lrrc8aQ80WG5 810 aa20.17■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Kcnk13Q8R1P5 405 aa20.17■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Ltb4r2Q9JJL9 360 aa20.17■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Cnpy2Q9QXT0 182 aa20.17■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Col4a1P02463 1669 aa20.17■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Slc4a1P04919 929 aa20.16■□□□□ 0.82
Ddx28-201ENSMUST00000058579 HdgfP51859 237 aaKnown RBP20.16■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Dhx40Q6PE54 779 aaKnown RBP20.16■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Gm29094F6Q785 221 aa20.16■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Atp2b1G5E829 1220 aa20.16■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Slu7Q8BHJ9 585 aa20.16■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Arid5bQ8BM75 1188 aaKnown RBP20.16■□□□□ 0.82
Ddx28-201ENSMUST00000058579 MthfsQ9D110 203 aa20.16■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Ehd4Q9EQP2 541 aa20.16■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Cfap99A0A140LIX9 648 aa20.15■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Naa16Q9DBB4 864 aa20.15■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Mctp2Q5RJH2 878 aa20.15■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Zpr1Q62384 459 aa20.15■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Terf2ipQ91VL8 393 aa20.15■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Ciao1Q99KN2 339 aa20.15■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Fam213aQ9CYH2 218 aa20.15■□□□□ 0.82
Ddx28-201ENSMUST00000058579 Plekhd1B2RPU2 505 aa20.14■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Cbx1P83917 185 aaKnown RBP20.14■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Atp2b3Q0VF55 1220 aa20.14■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Zkscan4Q5SZT6 480 aa20.14■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Q8BZJ8 459 aa20.14■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Golph3lQ8R088 285 aaKnown RBP20.14■□□□□ 0.81
Ddx28-201ENSMUST00000058579 TnksQ6PFX9 1320 aa20.14■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Hand2Q61039 217 aa20.14■□□□□ 0.81
Ddx28-201ENSMUST00000058579 IbspQ61711 324 aa20.14■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Ube2oQ6ZPJ3 1288 aa20.14■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Fbxo2Q80UW2 297 aa20.14■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Ints5Q8CHT3 1018 aa20.14■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Alg3Q8K2A8 438 aa20.14■□□□□ 0.81
Ddx28-201ENSMUST00000058579 ZgpatQ8VDM1 511 aa20.14■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Cdhr2E9Q7P9 1308 aa20.13■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Dnaaf4Q8R368 420 aa20.13■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Ppil4Q9CXG3 492 aaKnown RBP20.13■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Dync1i1O88485 628 aa20.13■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Pald1P70261 859 aa20.13■□□□□ 0.81
Ddx28-201ENSMUST00000058579 U2af1l4Q8BGJ9 220 aa20.13■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Ttc19Q8CC21 365 aa20.13■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Ints4Q8CIM8 964 aa20.13■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Mrc1Q61830 1456 aa20.12■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Tcof1O08784 1320 aaKnown RBP20.12■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Card6E9PWH2 1175 aa20.12■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Zscan29E9Q5B4 869 aa20.12■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Srek1Q8BZX4 494 aaKnown RBP20.12■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Telo2Q9DC40 840 aaKnown RBP20.12■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Vmn2r23E9PXI5 849 aa20.11■□□□□ 0.81
Ddx28-201ENSMUST00000058579 XpcP51612 930 aa20.11■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Smim5Q8BT42 78 aa20.11■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Shisa4Q8CA71 197 aa20.11■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Ppp4r3bQ922R5 820 aa20.11■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Clic4Q9QYB1 253 aa20.11■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Tiam2Q6ZPF3 1715 aa20.11■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Gm21680A0A0G2JGR8 267 aa20.11■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Ms4a1P19437 291 aa20.11■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Ankib1Q6ZPS6 1085 aa20.11■□□□□ 0.81
Ddx28-201ENSMUST00000058579 AbraQ8BUZ1 375 aa20.11■□□□□ 0.81
Ddx28-201ENSMUST00000058579 SdsQ8VBT2 327 aa20.11■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Ncoa5Q91W39 579 aaKnown RBP20.11■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Wdr19Q3UGF1 1341 aa20.1■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Cyp3a57D3YYZ0 503 aa20.1■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Cep135Q6P5D4 1140 aa20.1■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Stk38Q91VJ4 465 aa20.1■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Carmil3Q3UFQ8 1375 aa20.1■□□□□ 0.81
Ddx28-201ENSMUST00000058579 TfrcQ62351 763 aaKnown RBP20.1■□□□□ 0.81
Ddx28-201ENSMUST00000058579 Tmem59lQ7TNI2 337 aa20.1■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms