RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Cdcp1Q5U462 833 aa13.71□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Tekt3Q6X6Z7 490 aa13.71□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Mroh1E0CZ22 1640 aa13.71□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Sgsm1Q8BPQ7 1093 aa13.71□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Pde3aQ9Z0X4 1141 aa13.71□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Mcm4P49717 862 aa13.71□□□□□ -0.21
Pcif1-201ENSMUST00000041643 MpndQ3TV65 487 aa13.71□□□□□ -0.21
Pcif1-201ENSMUST00000041643 EspnlQ3UYR4 1005 aa13.71□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Bag1Q60739 355 aa13.71□□□□□ -0.21
Pcif1-201ENSMUST00000041643 GlmnQ8BZM1 596 aa13.71□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Ktn1Q61595 1327 aaKnown RBP13.71□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Kif2cQ922S8 721 aa13.71□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Pik3ap1Q9EQ32 811 aa13.71□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Erbb4Q61527 1308 aa13.71□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Ube2hP62257 183 aa13.7□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Atp1b3P97370 278 aa13.7□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Txndc16Q7TN22 820 aa13.7□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Catsper2A2ARP9 588 aa13.7□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Rufy3Q9D394 469 aa13.7□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Syt1P46096 421 aa13.7□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Mns1Q61884 491 aa13.7□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Nlrp9aQ66X03 949 aa13.7□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Ncoa5Q91W39 579 aaKnown RBP13.7□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Tbc1d8Q9Z1A9 1134 aa13.7□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Rtn1Q8K0T0 780 aa13.7□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Ppp6r3Q922D4 844 aa13.7□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Tut1Q8R3F9 869 aa13.69□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Krt23Q99PS0 422 aa13.69□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Erich4Q3UNU4 136 aa13.69□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Fez1Q8K0X8 392 aa13.69□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Zscan29E9Q5B4 869 aa13.69□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Cacna2d4Q5RJF7 1116 aa13.69□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Rps6kb1Q8BSK8 525 aa13.69□□□□□ -0.22
Pcif1-201ENSMUST00000041643 BrapQ99MP8 591 aa13.69□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Ttll7A4Q9F0 912 aa13.69□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Ftl2P49945 183 aa13.69□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Gnl2Q99LH1 728 aaKnown RBP13.69□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Appbp2Q9DAX9 585 aa13.69□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Clip2Q9Z0H8 1047 aa13.69□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Bin1O08539 588 aaKnown RBP13.68□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Dapk3O54784 448 aa13.68□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Calm1P0DP26 149 aaKnown RBP13.68□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Calm2P0DP27 149 aaKnown RBP13.68□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Calm3P0DP28 149 aaKnown RBP13.68□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Ranbp6Q8BIV3 1105 aa13.68□□□□□ -0.22
Pcif1-201ENSMUST00000041643 9230110C19RikQ8CC70 267 aa13.68□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Dis3l2Q8CI75 870 aaKnown RBP13.68□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Vps16Q920Q4 839 aa13.68□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Pnmal2G3X9N3 661 aa13.68□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Ccdc34Q3UI66 367 aa13.68□□□□□ -0.22
Pcif1-201ENSMUST00000041643 CenpqQ9CPQ5 267 aa13.68□□□□□ -0.22
Pcif1-201ENSMUST00000041643 CemipQ8BI06 1361 aa13.68□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Hspa2P17156 633 aa13.68□□□□□ -0.22
Pcif1-201ENSMUST00000041643 GnaqP21279 359 aa13.68□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Tgfb1i1Q62219 461 aa13.68□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Nlrp1aQ2LKU9 1182 aa13.68□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Lamb3Q61087 1168 aa13.68□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Q9D5Q8 446 aa13.68□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Dip2bQ3UH60 1574 aa13.68□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Tsg101Q61187 391 aa13.68□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Simc1E9Q6E9 1354 aa13.67□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Eme2Q56A04 373 aa13.67□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Topbp1Q6ZQF0 1515 aa13.67□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Lrrc45Q8CIM1 670 aa13.67□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Pdcd6ipQ9WU78 869 aaKnown RBP13.67□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Knop1Q9Z2Q2 478 aaKnown RBP13.67□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Prl3d1P18121 224 aa13.67□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Sdc2P43407 202 aa13.67□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Terf2ipQ91VL8 393 aa13.67□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Stx1aO35526 288 aa13.67□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Prdm1Q60636 856 aa13.67□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Dok7Q18PE0 504 aa13.66□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Prune1Q8BIW1 454 aa13.66□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Epb41l3Q9WV92 929 aa13.66□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Atp8b3Q6UQ17 1335 aa13.66□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Tacc1Q6Y685 774 aa13.66□□□□□ -0.22
Pcif1-201ENSMUST00000041643 4930504O13RikQ8C5Z9 145 aa13.66□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Gdpd2Q9ESM6 539 aa13.66□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Mrvi1Q9WUX5 899 aaKnown RBP13.66□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Prl7a2O54831 253 aa13.66□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Zbtb1Q91VL9 713 aa13.66□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Ncaph2Q8BSP2 607 aa13.66□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Trim52Q8CDV4 233 aa13.66□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Cyp24a1Q64441 514 aa13.66□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Ano1Q8BHY3 960 aa13.66□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Slc27a3O88561 667 aa13.65□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Lrrc2Q8VDB8 371 aa13.65□□□□□ -0.22
Pcif1-201ENSMUST00000041643 InsrrQ9WTL4 1300 aa13.65□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Gm29094F6Q785 221 aa13.65□□□□□ -0.22
Pcif1-201ENSMUST00000041643 MarsQ68FL6 902 aaKnown RBP13.65□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Slc13a4Q8BZ82 625 aa13.65□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Taf5lQ91WQ5 589 aa13.65□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Dph6Q9CQ28 267 aa13.65□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Csrnp1P59054 583 aa13.65□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Utp18Q5SSI6 552 aaKnown RBP13.65□□□□□ -0.22
Pcif1-201ENSMUST00000041643 Rims2Q9EQZ7 1530 aa13.64□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Plbd2Q3TCN2 594 aa13.64□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Large2Q5XPT3 690 aa13.64□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Pim2Q62070 370 aa13.64□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Ppp1r37Q8BKR5 712 aa13.64□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 56.6 ms