RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 Cyp2c23E9Q5K4 494 aa23.79■■□□□ 1.4
Ctdsp1-201ENSMUST00000027367 Rps6ka4Q9Z2B9 773 aa23.79■■□□□ 1.4
Ctdsp1-201ENSMUST00000027367 Aox1O54754 1333 aa23.79■■□□□ 1.4
Ctdsp1-201ENSMUST00000027367 Sept1P42209 366 aa23.79■■□□□ 1.4
Ctdsp1-201ENSMUST00000027367 Stat1P42225 749 aa23.79■■□□□ 1.4
Ctdsp1-201ENSMUST00000027367 Plbd2Q3TCN2 594 aa23.79■■□□□ 1.4
Ctdsp1-201ENSMUST00000027367 Mindy4Q3UQI9 744 aa23.79■■□□□ 1.4
Ctdsp1-201ENSMUST00000027367 Ppp1r10Q80W00 888 aaKnown RBP23.79■■□□□ 1.4
Ctdsp1-201ENSMUST00000027367 Bloc1s2Q9CWG9 143 aa23.79■■□□□ 1.4
Ctdsp1-201ENSMUST00000027367 Syce3B5KM66 88 aa23.78■■□□□ 1.4
Ctdsp1-201ENSMUST00000027367 Babam1Q3UI43 333 aa23.78■■□□□ 1.4
Ctdsp1-201ENSMUST00000027367 Tmem67Q8BR76 992 aa23.78■■□□□ 1.4
Ctdsp1-201ENSMUST00000027367 Tubb6Q922F4 447 aa23.78■■□□□ 1.4
Ctdsp1-201ENSMUST00000027367 Mad1l1Q9WTX8 717 aaKnown RBP23.78■■□□□ 1.4
Ctdsp1-201ENSMUST00000027367 Plekhf1Q3TB82 279 aa23.78■■□□□ 1.4
Ctdsp1-201ENSMUST00000027367 NgdnQ9DB96 315 aaKnown RBP23.78■■□□□ 1.4
Ctdsp1-201ENSMUST00000027367 Prr29B1ARI9 187 aa23.77■■□□□ 1.4
Ctdsp1-201ENSMUST00000027367 NaspQ99MD9 773 aaKnown RBP23.77■■□□□ 1.4
Ctdsp1-201ENSMUST00000027367 Plekho1Q9JIY0 408 aa23.77■■□□□ 1.4
Ctdsp1-201ENSMUST00000027367 Usp42B2RQC2 1324 aaKnown RBP23.77■■□□□ 1.4
Ctdsp1-201ENSMUST00000027367 Kif4P33174 1231 aa23.77■■□□□ 1.4
Ctdsp1-201ENSMUST00000027367 Edrf1Q6GQV7 1239 aa23.77■■□□□ 1.4
Ctdsp1-201ENSMUST00000027367 Gm21985Q6P6P5 1106 aa23.77■■□□□ 1.4
Ctdsp1-201ENSMUST00000027367 Cfap44E9Q5M6 1843 aa23.76■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Snrpa1P57784 255 aaKnown RBP23.76■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 VeztQ3ZK22 780 aa23.76■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Zfp113Q8C689 439 aa23.76■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Cep57l1Q8VDS7 400 aa23.76■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Riok1Q922Q2 567 aa23.76■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Emilin1Q99K41 1017 aa23.76■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Appbp2Q9DAX9 585 aa23.76■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Ccdc66Q6NS45 935 aa23.76■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Me3Q8BMF3 604 aa23.76■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Ube3bQ9ES34 1070 aa23.76■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Iffo2Q8R2V2 512 aa23.75■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Mapk8ip1Q9WVI9 707 aa23.75■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Prl3d1P18121 224 aa23.75■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Smarcc1P97496 1104 aa23.75■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Spty2d1Q68FG3 682 aa23.75■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Ppp6r1Q7TSI3 856 aa23.75■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 SowahdQ8BY98 327 aa23.75■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Snai1Q02085 264 aa23.74■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Hand2Q61039 217 aa23.74■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Sgsm1Q8BPQ7 1093 aa23.74■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Grpel1Q99LP6 217 aa23.74■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Exosc10P56960 887 aaKnown RBP23.74■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Leo1Q5XJE5 667 aa23.74■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Setdb1O88974 1307 aa23.74■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 GakQ99KY4 1305 aa23.74■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Lmod3E9QA62 571 aa23.74■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Cyp2d34L7N463 504 aa23.74■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 MpndQ3TV65 487 aa23.74■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Atad2Q8CDM1 1040 aa23.74■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Shisa4Q8CA71 197 aa23.73■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Naa30Q8CES0 364 aa23.73■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Fam114a1Q9D281 569 aa23.73■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Nhsl1Q8CAF4 1587 aa23.73■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Fbxo3Q9DC63 480 aa23.73■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Gtpbp6Q3U6U5 514 aa23.72■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Zc3h12cQ5DTV4 884 aa23.72■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Q8BT18 775 aa23.72■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Plcd3Q8K2J0 785 aa23.72■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Kcnq3Q8K3F6 873 aa23.72■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Sytl4Q9R0Q1 673 aa23.72■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Ccdc178Q8CDV0 866 aa23.72■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 ZwintQ9CQU5 252 aa23.72■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Sept12Q9D451 317 aa23.72■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Sik3Q6P4S6 1311 aa23.71■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Cyp2d9P11714 504 aa23.71■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Kif3aP28741 701 aa23.71■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Pms1Q8K119 917 aa23.71■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Ttc14Q9CSP9 761 aa23.71■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Carmil3Q3UFQ8 1375 aa23.71■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Il17raQ60943 864 aa23.7■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Pes1Q9EQ61 584 aaKnown RBP23.7■■□□□ 1.39
Ctdsp1-201ENSMUST00000027367 Speer4dL7N216 212 aa23.7■■□□□ 1.38
Ctdsp1-201ENSMUST00000027367 Gm4340L7N2C4 268 aa23.7■■□□□ 1.38
Ctdsp1-201ENSMUST00000027367 Cd22P35329 862 aa23.7■■□□□ 1.38
Ctdsp1-201ENSMUST00000027367 Plch1Q4KWH5 1682 aa23.7■■□□□ 1.38
Ctdsp1-201ENSMUST00000027367 Ube2hP62257 183 aa23.7■■□□□ 1.38
Ctdsp1-201ENSMUST00000027367 BrapQ99MP8 591 aa23.69■■□□□ 1.38
Ctdsp1-201ENSMUST00000027367 Col3a1P08121 1464 aa23.69■■□□□ 1.38
Ctdsp1-201ENSMUST00000027367 Gm13023A2A8N2 498 aa23.69■■□□□ 1.38
Ctdsp1-201ENSMUST00000027367 Rtkn2Q14B46 604 aa23.69■■□□□ 1.38
Ctdsp1-201ENSMUST00000027367 Emilin2Q8K482 1074 aa23.68■■□□□ 1.38
Ctdsp1-201ENSMUST00000027367 Znfx1Q8R151 1909 aaKnown RBP23.68■■□□□ 1.38
Ctdsp1-201ENSMUST00000027367 Stox1B2RQL2 990 aa23.68■■□□□ 1.38
Ctdsp1-201ENSMUST00000027367 Zscan25B2RX31 543 aa23.68■■□□□ 1.38
Ctdsp1-201ENSMUST00000027367 Gm29094F6Q785 221 aa23.68■■□□□ 1.38
Ctdsp1-201ENSMUST00000027367 Cct2P80314 535 aaKnown RBP23.68■■□□□ 1.38
Ctdsp1-201ENSMUST00000027367 Ncaph2Q8BSP2 607 aa23.68■■□□□ 1.38
Ctdsp1-201ENSMUST00000027367 Tmem143Q8VD26 458 aa23.68■■□□□ 1.38
Ctdsp1-201ENSMUST00000027367 MthfsQ9D110 203 aa23.68■■□□□ 1.38
Ctdsp1-201ENSMUST00000027367 Ltbp1Q8CG19 1712 aa23.68■■□□□ 1.38
Ctdsp1-201ENSMUST00000027367 Hap1O35668 628 aa23.67■■□□□ 1.38
Ctdsp1-201ENSMUST00000027367 Gm45140A0A0N4SUM8 220 aa23.67■■□□□ 1.38
Ctdsp1-201ENSMUST00000027367 CltaO08585 235 aa23.67■■□□□ 1.38
Ctdsp1-201ENSMUST00000027367 Pla2g4fQ50L41 855 aa23.67■■□□□ 1.38
Ctdsp1-201ENSMUST00000027367 Nap1l3Q794H2 544 aa23.67■■□□□ 1.38
Ctdsp1-201ENSMUST00000027367 Abtb2Q7TQI7 1024 aa23.67■■□□□ 1.38
Retrieved 100 of 22,080 RNA–protein pairs in 96 ms