RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Gramd2aQ3V3G7 320 aa6.89□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Npy4rQ61041 375 aa6.89□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Usp17laQ61068 526 aa6.89□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Cldn17Q8BXA6 224 aa6.89□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Gpr61Q8C010 449 aa6.89□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Cypt1Q8CH20 168 aa6.89□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Reep4Q8K072 257 aa6.89□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Vmn1r17Q8R2D8 303 aa6.89□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Q8WUR0 141 aa6.89□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Rab4bQ91ZR1 213 aa6.89□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Gjc3Q921C1 269 aa6.89□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Ucn3Q924A4 164 aa6.89□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Slc29a3Q99P65 475 aa6.89□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Cldn23Q9D7D7 296 aa6.89□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Tmigd1Q9D7L8 261 aa6.89□□□□□ -1.31
Bdnf-209ENSMUST00000111050 C1qtnf2Q9D8U4 294 aa6.89□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Olfr155Q9QZ22 319 aa6.89□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Gabrg1Q9R0Y8 465 aa6.89□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Il18bpQ9Z0M9 193 aa6.89□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Scn2aA0A0J9YTW6 2006 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 UgdhO70475 493 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 SrcP05480 541 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Znf271P15620 580 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Ggta1P23336 394 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 CatP24270 527 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Pcsk4P29121 655 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Mc3rP33033 323 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Cd84Q18PI6 329 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Scrn3Q3TMH2 418 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 HgsnatQ3UDW8 656 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Gal3st2cQ3ULK5 396 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Gm5127Q3UQH6 212 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Nhlh2Q64221 135 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Stk35Q80ZW0 539 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Q8BHG2 160 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Srrm4Q8BKA3 608 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Nob1Q8BW10 403 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Cacul1Q8R0X2 377 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Exosc2Q8VBV3 293 aaKnown RBP6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Olfr1079Q8VF52 315 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Pbx4Q99NE9 378 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Cdc40Q9DC48 579 aaKnown RBP6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Olfr943Q9EQ92 314 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Tas2r105Q9JKT4 300 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Syt6Q9R0N8 511 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Ak4Q9WUR9 223 aaKnown RBP6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 SncgQ9Z0F7 123 aaKnown RBP6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Olfr560A0A1B0GSU5 314 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Gm13285B1AYI3 182 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Gm13275B1AYI8 182 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Zfp599E9PWP1 548 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Slc17a3G3UWD9 498 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Opn1mwO35599 359 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Hist1h2bmP10854 126 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 GrprP21729 384 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Rab11bP46638 218 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Defa11P50709 85 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 StomP54116 284 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Tbx4P70325 552 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 RelbQ04863 558 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Zcwpw2Q08EN7 125 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Cd300lbQ3U497 209 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Slc2a6Q3UDF0 497 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Slc7a15Q50E62 488 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Xkr5Q5GH66 676 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Lrrc52Q5M8M9 314 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Olfr11Q60890 313 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Hist1h2bhQ64478 126 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Hist2h2bbQ64525 126 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Hist1h2bcQ6ZWY9 126 aaKnown RBP6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 St6gal2Q76K27 524 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Lrrc75bQ7TPD7 306 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Pgm2Q7TSV4 620 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Slitrk2Q810C0 846 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 IfnzQ8BQT1 182 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 RybpQ8CCI5 228 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Gm13278Q8CD73 182 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Hist3h2bbQ8CGP0 126 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Vmn1r21Q8R2C6 297 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Olfr1277Q8VF41 303 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Olfr1446Q8VFX4 308 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Olfr472Q8VG43 310 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Tktl1Q99MX0 595 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Rtn4rQ99PI8 473 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Hist3h2baQ9D2U9 126 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Ceacam20Q9D2Z1 577 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Glipr1l1Q9DAG6 236 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Q9DAR0 182 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Enpp5Q9EQG7 477 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Aif1lQ9EQX4 150 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Cep350E9Q309 3095 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Gm42420A0A0J9YUQ2 99 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Aadacl3A2A7Z8 408 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Gm3543D3Z235 184 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Fzd1O70421 642 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Hoxb3P09026 433 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Irf1P15314 329 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Lhx1P63006 406 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Csf2raQ00941 388 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Col6a2Q02788 1034 aa6.88□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 32.2 ms