RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 4933402N03RikQ8CDT9 329 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Commd1Q8K4M5 188 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Olfr812Q8VG64 310 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Sfxn1Q99JR1 322 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Q99K99 313 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Rhox4aQ9D3I8 205 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Arfgap3Q9D8S3 523 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Hacd1Q9QY80 281 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Anxa10Q9QZ10 324 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 FancmQ8BGE5 2021 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Igkv16-104A0A0B4J1I1 116 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 5430403G16RikD3Z5L4 667 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 4930595D18RikD3Z642 64 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Vmn1r174E9PYW5 313 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Olfr432E9Q8M2 312 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Gm15130F6PYN5 206 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Fgf4P11403 202 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 CebpbP28033 296 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Plpp4Q0VBU9 271 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Foxred1Q3TQB2 487 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Q3TTL0 348 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 DdiasQ6NZG4 898 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Parp16Q7TMM8 322 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Olfr1357Q7TQU7 313 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Bpifb3Q80ZU7 473 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Tmem108Q8BHE4 574 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Eif1axQ8BMJ3 144 aaKnown RBP13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Sdhaf3Q8BQU3 125 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Rspry1Q8BVR6 576 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Gpr1Q8K087 353 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Olfr777Q8VFH3 311 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Olfr826Q8VFU6 313 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Olfr825Q8VFU7 320 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Pcdhb20Q91XZ9 799 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 HaghQ99KB8 309 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Dram2Q9CR48 267 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Sapcd1Q9CY86 146 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Serpinb7Q9D695 380 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Gpx8Q9D7B7 209 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 1700013G24RikQ9DAC6 286 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Npas3Q9QZQ0 925 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Fxyd1Q9Z239 92 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Ccdc166S4R181 449 aa13.34□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Gm21488A0A087WR99 222 aa13.33□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Gm45711E0CXA2 391 aa13.33□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Gm17067E9Q6S4 354 aa13.33□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Vmn2r82G3UWA2 865 aa13.33□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Gm8888J3QPX5 126 aa13.33□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Cd8aP01731 247 aa13.33□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Sdc1P18828 311 aa13.33□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Il10P18893 178 aa13.33□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Igfbp1P47876 272 aa13.33□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Tmem104Q3TB48 496 aa13.33□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Fbxl8Q8CIG9 374 aa13.33□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Vmn1r37Q8R2E4 302 aa13.33□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Olfr1176Q8VG40 315 aa13.33□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Rbm39Q8VH51 530 aaKnown RBP13.33□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 OgfrQ99PG2 633 aa13.33□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Cers4Q9D6J1 393 aa13.33□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 MNCb-2990Q9JJ93 142 aa13.33□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 Ch25hQ9Z0F5 298 aa13.33□□□□□ -0.27
Ushbp1-201ENSMUST00000049184 ItpkbB2RXC2 942 aa13.33□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 4930522L14RikE9QAG4 666 aa13.33□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 PomcP01193 235 aa13.33□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Csf1P07141 552 aa13.33□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Camk2bP28652 542 aa13.33□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Pcsk4P29121 655 aa13.33□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Foxa1P35582 468 aa13.33□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Arf3P61205 181 aa13.33□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 ShhQ62226 437 aa13.33□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Glt8d1Q6NSU3 371 aa13.33□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Gpatch2Q7TQC7 527 aa13.33□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Olfr1287Q7TQY1 305 aa13.33□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Nhlrc2Q8BZW8 725 aa13.33□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 RergQ8R367 199 aa13.33□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Olfr401Q8VFX6 315 aa13.33□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Serpinb1bQ8VHP7 382 aa13.33□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Atg5Q99J83 275 aa13.33□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Tmem138Q9D6G5 162 aa13.33□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 CutcQ9D8X1 272 aa13.33□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Nkain4Q9JMG4 208 aa13.33□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Nxt1Q9QZV9 140 aa13.33□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Zbtb34A2ATY4 518 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Vmn1r152E9Q9N3 307 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Vmn1r120K7N6J6 305 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Vmn1r104L7N293 307 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 P04214 136 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 CycsP62897 105 aaKnown RBP13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Ceacam12Q3UKP4 300 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Nxt2Q3UNA4 142 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Clns1aQ61189 236 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Zfp429Q7M6Y0 485 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 PigvQ7TPN3 493 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Plekhm1Q7TSI1 1074 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 CslQ80X68 466 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Znf775Q8BI73 538 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Tsen54Q8C2A2 525 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Krt33aQ8K0Y2 404 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Neil1Q8K4Q6 389 aa13.32□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Hspb2Q99PR8 182 aa13.32□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 105.5 ms