Protein–RNA interactions for Protein: Q80X68

Csl, Citrate synthase, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CslQ80X68 Gm25239-201ENSMUST00000174915 86 ntBASIC40.06■■■■■ 4
CslQ80X68 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.26■■■■□ 3.56
CslQ80X68 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.71■■■■□ 3.47
CslQ80X68 Gm24109-201ENSMUST00000175489 103 ntBASIC34.96■■■■□ 3.19
CslQ80X68 Gm15042-201ENSMUST00000120212 883 ntBASIC34.6■■■■□ 3.13
CslQ80X68 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.87■■■■□ 3.01
CslQ80X68 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.84■■■■□ 3.01
CslQ80X68 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
CslQ80X68 Gm15045-201ENSMUST00000117359 883 ntBASIC33.71■■■□□ 2.99
CslQ80X68 Gm23366-201ENSMUST00000175022 89 ntBASIC33.42■■■□□ 2.94
CslQ80X68 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
CslQ80X68 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.75■■■□□ 2.83
CslQ80X68 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.47■■■□□ 2.79
CslQ80X68 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.41■■■□□ 2.78
CslQ80X68 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
CslQ80X68 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CslQ80X68 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CslQ80X68 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.03■■■□□ 2.72
CslQ80X68 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CslQ80X68 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CslQ80X68 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.83■■■□□ 2.69
CslQ80X68 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CslQ80X68 Gm25238-201ENSMUST00000174914 89 ntBASIC31.75■■■□□ 2.67
CslQ80X68 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CslQ80X68 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
CslQ80X68 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.12■■■□□ 2.57
CslQ80X68 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CslQ80X68 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CslQ80X68 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
CslQ80X68 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
CslQ80X68 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.93■■■□□ 2.54
CslQ80X68 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.83■■■□□ 2.53
CslQ80X68 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.75■■■□□ 2.51
CslQ80X68 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CslQ80X68 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.7■■■□□ 2.51
CslQ80X68 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.68■■■□□ 2.5
CslQ80X68 Gm25262-201ENSMUST00000174934 133 ntBASIC30.68■■■□□ 2.5
CslQ80X68 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
CslQ80X68 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CslQ80X68 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.41■■■□□ 2.46
CslQ80X68 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.39■■■□□ 2.46
CslQ80X68 Gm27325-201ENSMUST00000175467 74 ntBASIC30.21■■■□□ 2.43
CslQ80X68 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.21■■■□□ 2.43
CslQ80X68 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.17■■■□□ 2.42
CslQ80X68 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CslQ80X68 Gm26115-201ENSMUST00000175605 87 ntBASIC30.1■■■□□ 2.41
CslQ80X68 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.06■■■□□ 2.4
CslQ80X68 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
CslQ80X68 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CslQ80X68 Rab21-202ENSMUST00000218831 843 ntBASIC29.98■■■□□ 2.39
CslQ80X68 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.96■■■□□ 2.39
CslQ80X68 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CslQ80X68 Gm8109-201ENSMUST00000194076 746 ntBASIC29.86■■■□□ 2.37
CslQ80X68 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CslQ80X68 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CslQ80X68 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CslQ80X68 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
CslQ80X68 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
CslQ80X68 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CslQ80X68 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.68■■■□□ 2.34
CslQ80X68 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
CslQ80X68 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.54■■■□□ 2.32
CslQ80X68 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.52■■■□□ 2.32
CslQ80X68 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.5■■■□□ 2.31
CslQ80X68 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.41■■■□□ 2.3
CslQ80X68 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CslQ80X68 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.28
CslQ80X68 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
CslQ80X68 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CslQ80X68 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.15■■■□□ 2.26
CslQ80X68 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
CslQ80X68 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.13■■■□□ 2.25
CslQ80X68 Psd-208ENSMUST00000224556 2034 ntBASIC29.12■■■□□ 2.25
CslQ80X68 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
CslQ80X68 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29.1■■■□□ 2.25
CslQ80X68 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CslQ80X68 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.25
CslQ80X68 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CslQ80X68 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.99■■■□□ 2.23
CslQ80X68 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
CslQ80X68 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.96■■■□□ 2.23
CslQ80X68 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.89■■■□□ 2.22
CslQ80X68 Gm24804-201ENSMUST00000174982 85 ntBASIC28.83■■■□□ 2.21
CslQ80X68 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.8■■■□□ 2.2
CslQ80X68 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
CslQ80X68 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.75■■■□□ 2.19
CslQ80X68 Gm27322-201ENSMUST00000184007 104 ntBASIC28.74■■■□□ 2.19
CslQ80X68 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CslQ80X68 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.7■■■□□ 2.19
CslQ80X68 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.67■■■□□ 2.18
CslQ80X68 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
CslQ80X68 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CslQ80X68 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
CslQ80X68 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.59■■■□□ 2.17
CslQ80X68 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.59■■■□□ 2.17
CslQ80X68 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
CslQ80X68 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CslQ80X68 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
CslQ80X68 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
CslQ80X68 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Retrieved 100 of 76,532 protein–RNA pairs in 252 ms