RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 STX3Q13277 289 aa5.03□□□□□ -1.6
TVP23B-210ENST00000582288 CNN3Q15417 329 aaKnown RBP5.03□□□□□ -1.6
TVP23B-210ENST00000582288 LY6EQ16553 131 aa5.03□□□□□ -1.6
TVP23B-210ENST00000582288 LRRC10Q5BKY1 277 aa5.03□□□□□ -1.6
TVP23B-210ENST00000582288 RABL3Q5HYI8 236 aa5.03□□□□□ -1.6
TVP23B-210ENST00000582288 PRAMEF6Q5VXH4 476 aa5.03□□□□□ -1.6
TVP23B-210ENST00000582288 HCP5Q6MZN7 132 aa5.03□□□□□ -1.6
TVP23B-210ENST00000582288 PGAP1Q75T13 922 aa5.03□□□□□ -1.6
TVP23B-210ENST00000582288 PATL1Q86TB9 770 aaKnown RBP5.03□□□□□ -1.6
TVP23B-210ENST00000582288 TSPYL5Q86VY4 417 aaPredicted RBP5.03□□□□□ -1.6
TVP23B-210ENST00000582288 RBM45Q8IUH3 476 aaKnown RBP5.03□□□□□ -1.6
TVP23B-210ENST00000582288 MSRB3Q8IXL7 192 aa5.03□□□□□ -1.6
TVP23B-210ENST00000582288 LINC00482Q8N8I6 264 aa5.03□□□□□ -1.6
TVP23B-210ENST00000582288 LRRC75AQ8NAA5 344 aa5.03□□□□□ -1.6
TVP23B-210ENST00000582288 C11orf65Q8NCR3 313 aa5.03□□□□□ -1.6
TVP23B-210ENST00000582288 Q8NFD4 153 aa5.03□□□□□ -1.6
TVP23B-210ENST00000582288 OR5AU1Q8NGC0 362 aa5.03□□□□□ -1.6
TVP23B-210ENST00000582288 OR4D11Q8NGI4 311 aa5.03□□□□□ -1.6
TVP23B-210ENST00000582288 SPRYD4Q8WW59 207 aaPredicted RBP5.03□□□□□ -1.6
TVP23B-210ENST00000582288 ADAT1Q9BUB4 502 aaKnown RBP5.03□□□□□ -1.6
TVP23B-210ENST00000582288 GRPEL1Q9HAV7 217 aa5.03□□□□□ -1.6
TVP23B-210ENST00000582288 SSU72Q9NP77 194 aaKnown RBP5.03□□□□□ -1.6
TVP23B-210ENST00000582288 PNPOQ9NVS9 261 aa5.03□□□□□ -1.6
TVP23B-210ENST00000582288 C14orf119Q9NWQ9 140 aa5.03□□□□□ -1.6
TVP23B-210ENST00000582288 C1orf123Q9NWV4 160 aa5.03□□□□□ -1.6
TVP23B-210ENST00000582288 VAPAQ9P0L0 249 aa5.03□□□□□ -1.6
TVP23B-210ENST00000582288 TCF19Q9Y242 345 aa5.03□□□□□ -1.6
TVP23B-210ENST00000582288 LSM4Q9Y4Z0 139 aaKnown RBP5.03□□□□□ -1.6
TVP23B-210ENST00000582288 NOTCH3Q9UM47 2321 aa5.03□□□□□ -1.6
TVP23B-210ENST00000582288 PCLOQ9Y6V0 5065 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.02□□□□□ -1.61
TVP23B-210ENST00000582288 A0A1W2PRD5 423 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 A0A1W2PRF3 423 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 A0A1W2PRM7 423 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 PRSS37A4D1T9 235 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 A6NDX4 124 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 NKX6-3A6NJ46 265 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 FAM90A8PA6NJQ4 464 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 CD300LBA8K4G0 201 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 KRTAP9-7A8MTY7 169 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 H3BUI4 141 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 UBDO15205 165 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 RER1O15258 196 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 TIPRLO75663 272 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 GLCEO94923 617 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 LYL1P12980 280 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 CA6P23280 308 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 CHATP28329 748 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 SLC6A1P30531 599 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 HOXD3P31249 432 aaPredicted RBP5.02□□□□□ -1.61
TVP23B-210ENST00000582288 NAA10P41227 235 aaPredicted RBP5.02□□□□□ -1.61
TVP23B-210ENST00000582288 SLC9A3P48764 834 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 DYNLT3P51808 116 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 CAV3P56539 151 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 DGCR2P98153 550 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 KLRD1Q13241 179 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 TOP3AQ13472 1001 aaPredicted RBP5.02□□□□□ -1.61
TVP23B-210ENST00000582288 HABP2Q14520 560 aaPredicted RBP5.02□□□□□ -1.61
TVP23B-210ENST00000582288 PCK2Q16822 640 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 RSPO1Q2MKA7 263 aaPredicted RBP5.02□□□□□ -1.61
TVP23B-210ENST00000582288 WDR38Q5JTN6 314 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 UNQ9370/PRO34162Q6UXP9 181 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 NKAIN4Q8IVV8 208 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 PNKDQ8N490 385 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 BOLLQ8N9W6 283 aaKnown RBP5.02□□□□□ -1.61
TVP23B-210ENST00000582288 OR9I1Q8NGQ6 314 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 PFN4Q8NHR9 129 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 TMEM255BQ8WV15 326 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 RORBQ92753 470 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 BPIFA2Q96DR5 249 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 MED30Q96HR3 178 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 PKNOX2Q96KN3 472 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 CCL13Q99616 98 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 CHID1Q9BWS9 393 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 IKZF5Q9H5V7 419 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 HEXA-AS1Q9H8Q6 139 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 WDR76Q9H967 626 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 GRHPRQ9UBQ7 328 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 RIMS3Q9UJD0 308 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 NDUFAF1Q9Y375 327 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 LRP12Q9Y561 859 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 CAPN7Q9Y6W3 813 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 HERC2O95714 4834 aa5.02□□□□□ -1.61
TVP23B-210ENST00000582288 TRBV23-1A0A0A0MS06 115 aa5.01□□□□□ -1.61
TVP23B-210ENST00000582288 A0A1W2PPH5 198 aa5.01□□□□□ -1.61
TVP23B-210ENST00000582288 TCRBV4S1A1TA0A5B7 111 aa5.01□□□□□ -1.61
TVP23B-210ENST00000582288 A6NLC8 198 aa5.01□□□□□ -1.61
TVP23B-210ENST00000582288 H0YHG0 523 aa5.01□□□□□ -1.61
TVP23B-210ENST00000582288 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.01□□□□□ -1.61
TVP23B-210ENST00000582288 XKRYO14609 159 aa5.01□□□□□ -1.61
TVP23B-210ENST00000582288 SYNGR1O43759 233 aa5.01□□□□□ -1.61
TVP23B-210ENST00000582288 KHDRBS3O75525 346 aaKnown RBP5.01□□□□□ -1.61
TVP23B-210ENST00000582288 GRPP07492 148 aa5.01□□□□□ -1.61
TVP23B-210ENST00000582288 CD14P08571 375 aa5.01□□□□□ -1.61
TVP23B-210ENST00000582288 ACSM4P0C7M7 580 aa5.01□□□□□ -1.61
TVP23B-210ENST00000582288 CTLA4P16410 223 aa5.01□□□□□ -1.61
TVP23B-210ENST00000582288 AZGP1P25311 298 aaKnown RBP5.01□□□□□ -1.61
TVP23B-210ENST00000582288 DDOSTP39656 456 aa5.01□□□□□ -1.61
TVP23B-210ENST00000582288 VDAC2P45880 294 aaPredicted RBP5.01□□□□□ -1.61
TVP23B-210ENST00000582288 BMXP51813 675 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms