RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 FAM96BQ9Y3D0 163 aa12.19□□□□□ -0.46
USB1-214ENST00000568848 MEGF11A6BM72 1044 aa12.18□□□□□ -0.46
USB1-214ENST00000568848 CD300LBA8K4G0 201 aa12.18□□□□□ -0.46
USB1-214ENST00000568848 NDUFB2O95178 105 aa12.18□□□□□ -0.46
USB1-214ENST00000568848 IFNW1P05000 195 aa12.18□□□□□ -0.46
USB1-214ENST00000568848 AMY2BP19961 511 aa12.18□□□□□ -0.46
USB1-214ENST00000568848 GSK3BP49841 420 aa12.18□□□□□ -0.46
USB1-214ENST00000568848 NUDT2P50583 147 aa12.18□□□□□ -0.46
USB1-214ENST00000568848 IKZF1Q13422 519 aa12.18□□□□□ -0.46
USB1-214ENST00000568848 KCNMB1Q16558 191 aa12.18□□□□□ -0.46
USB1-214ENST00000568848 CD276Q5ZPR3 534 aa12.18□□□□□ -0.46
USB1-214ENST00000568848 C8orf82Q6P1X6 216 aaPredicted RBP12.18□□□□□ -0.46
USB1-214ENST00000568848 GDPGP1Q6ZNW5 385 aa12.18□□□□□ -0.46
USB1-214ENST00000568848 PGAP1Q75T13 922 aa12.18□□□□□ -0.46
USB1-214ENST00000568848 MRPL21Q7Z2W9 205 aaKnown RBP12.18□□□□□ -0.46
USB1-214ENST00000568848 ARPINQ7Z6K5 226 aa12.18□□□□□ -0.46
USB1-214ENST00000568848 Q8N7P7 452 aa12.18□□□□□ -0.46
USB1-214ENST00000568848 PNLDC1Q8NA58 520 aaKnown RBP12.18□□□□□ -0.46
USB1-214ENST00000568848 GJC3Q8NFK1 279 aa12.18□□□□□ -0.46
USB1-214ENST00000568848 OR5T2Q8NGG2 359 aa12.18□□□□□ -0.46
USB1-214ENST00000568848 ZNRF4Q8WWF5 429 aa12.18□□□□□ -0.46
USB1-214ENST00000568848 RSRC1Q96IZ7 334 aaKnown RBP12.18□□□□□ -0.46
USB1-214ENST00000568848 HSH2DQ96JZ2 352 aa12.18□□□□□ -0.46
USB1-214ENST00000568848 NMNAT3Q96T66 252 aa12.18□□□□□ -0.46
USB1-214ENST00000568848 WACQ9BTA9 647 aa12.18□□□□□ -0.46
USB1-214ENST00000568848 NRIP3Q9NQ35 241 aa12.18□□□□□ -0.46
USB1-214ENST00000568848 RPUSD1Q9UJJ7 312 aaKnown RBP12.18□□□□□ -0.46
USB1-214ENST00000568848 B9D1Q9UPM9 204 aa12.18□□□□□ -0.46
USB1-214ENST00000568848 TRBV4-1A0A0J9YWV2 114 aa12.17□□□□□ -0.46
USB1-214ENST00000568848 CXCR6O00574 342 aa12.17□□□□□ -0.46
USB1-214ENST00000568848 GSTA4O15217 222 aa12.17□□□□□ -0.46
USB1-214ENST00000568848 TSPAN9O75954 239 aa12.17□□□□□ -0.46
USB1-214ENST00000568848 FSTL3O95633 263 aa12.17□□□□□ -0.46
USB1-214ENST00000568848 NCK1P16333 377 aa12.17□□□□□ -0.46
USB1-214ENST00000568848 CPT2P23786 658 aa12.17□□□□□ -0.46
USB1-214ENST00000568848 NPY4RP50391 375 aa12.17□□□□□ -0.46
USB1-214ENST00000568848 WDR38Q5JTN6 314 aa12.17□□□□□ -0.46
USB1-214ENST00000568848 KPRPQ5T749 579 aaPredicted RBP12.17□□□□□ -0.46
USB1-214ENST00000568848 C11orf87Q6NUJ2 197 aa12.17□□□□□ -0.46
USB1-214ENST00000568848 SLC26A10Q8NG04 563 aa12.17□□□□□ -0.46
USB1-214ENST00000568848 OR4K13Q8NH42 304 aa12.17□□□□□ -0.46
USB1-214ENST00000568848 SLC7A13Q8TCU3 470 aa12.17□□□□□ -0.46
USB1-214ENST00000568848 HOPXQ9BPY8 73 aaPredicted RBP12.17□□□□□ -0.46
USB1-214ENST00000568848 RPRD1BQ9NQG5 326 aaKnown RBP12.17□□□□□ -0.46
USB1-214ENST00000568848 COL7A1Q02388 2944 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 TVP23AA6NH52 213 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.16□□□□□ -0.46
USB1-214ENST00000568848 J3QW42 95 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 ACOT8O14734 319 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 NPFFO15130 113 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 SNX3O60493 162 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 OPN1MWP04001 364 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 OPN1MW2P0DN77 364 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 OPN1MW3P0DN78 364 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 VSIG8P0DPA2 414 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 GABRA5P31644 462 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 PYCR1P32322 319 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 GGT2P36268 569 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 OMPP47874 163 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 PSME3P61289 254 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 PCK2Q16822 640 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 NSUN5P1Q3KNT7 163 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 CDONQ4KMG0 1287 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 FGD3Q5JSP0 725 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 ZBTB37Q5TC79 503 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 HACD2Q6Y1H2 254 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 CPLX4Q7Z7G2 160 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 C11orf53Q8IXP5 236 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 FAM156AQ8NDB6 213 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 SDR9C7Q8NEX9 313 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 OR56B2PQ8NGI1 322 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 LRRC29Q8WV35 223 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 LZICQ8WZA0 190 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 ERMAPQ96PL5 475 aaPredicted RBP12.16□□□□□ -0.46
USB1-214ENST00000568848 ATF6BQ99941 703 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 DPAGT1Q9H3H5 408 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 CNTD2Q9H8S5 307 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 ELL3Q9HB65 397 aaPredicted RBP12.16□□□□□ -0.46
USB1-214ENST00000568848 SNTG1Q9NSN8 517 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 AURKAIP1Q9NWT8 199 aaPredicted RBP12.16□□□□□ -0.46
USB1-214ENST00000568848 MRPL22Q9NWU5 206 aaKnown RBP12.16□□□□□ -0.46
USB1-214ENST00000568848 ATPIF1Q9UII2 106 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 AP3M1Q9Y2T2 418 aa12.16□□□□□ -0.46
USB1-214ENST00000568848 TRAV38-1A0A0B4J264 116 aa12.15□□□□□ -0.46
USB1-214ENST00000568848 MEIOCA2RUB1 952 aa12.15□□□□□ -0.46
USB1-214ENST00000568848 ANKRD61A6NGH8 418 aa12.15□□□□□ -0.46
USB1-214ENST00000568848 GGT3PA6NGU5 568 aa12.15□□□□□ -0.46
USB1-214ENST00000568848 H3BUX3 64 aa12.15□□□□□ -0.46
USB1-214ENST00000568848 SERPINA1P01009 418 aa12.15□□□□□ -0.46
USB1-214ENST00000568848 LIPFP07098 398 aa12.15□□□□□ -0.46
USB1-214ENST00000568848 SAA4P35542 130 aa12.15□□□□□ -0.46
USB1-214ENST00000568848 RPL15P61313 204 aaKnown RBP12.15□□□□□ -0.46
USB1-214ENST00000568848 GNGT1P63211 74 aa12.15□□□□□ -0.46
USB1-214ENST00000568848 HABP2Q14520 560 aaPredicted RBP12.15□□□□□ -0.46
USB1-214ENST00000568848 HERPUD1Q15011 391 aa12.15□□□□□ -0.46
USB1-214ENST00000568848 ANKDD1AQ495B1 522 aa12.15□□□□□ -0.46
USB1-214ENST00000568848 IFI44LQ53G44 452 aa12.15□□□□□ -0.46
USB1-214ENST00000568848 CBLL1Q75N03 491 aa12.15□□□□□ -0.46
USB1-214ENST00000568848 LINC00471Q8N535 108 aa12.15□□□□□ -0.46
USB1-214ENST00000568848 KLHDC1Q8N7A1 406 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms