RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 CTF1Q16619 201 aa12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 C3orf36Q3SXR2 165 aa12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 FAM57BQ71RH2 274 aa12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 CEACAM19Q7Z692 300 aa12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 MDP1Q86V88 176 aa12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 C1orf174Q8IYL3 243 aa12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 PRSS35Q8N3Z0 413 aa12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 OR5L1Q8NGL2 311 aa12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 HSD17B8Q92506 261 aa12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 ACTR6Q9GZN1 396 aa12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 CDH20Q9HBT6 801 aa12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 G6PC2Q9NQR9 355 aa12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 NPDC1Q9NQX5 325 aaPredicted RBP12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 TXNL4BQ9NX01 149 aaKnown RBP12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 ZNF224Q9NZL3 707 aa12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 DHDHQ9UQ10 334 aa12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 N6AMT1Q9Y5N5 214 aa12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 LRRK2Q5S007 2527 aa12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 SPTBN1Q01082 2364 aaKnown RBP12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 C5orf49A4QMS7 147 aa12.1□□□□□ -0.47
CSNK1D-209ENST00000578904 C19orf84I3L1E1 186 aa12.1□□□□□ -0.47
CSNK1D-209ENST00000578904 XRCC2O43543 280 aa12.1□□□□□ -0.47
CSNK1D-209ENST00000578904 SYT7O43581 403 aa12.1□□□□□ -0.47
CSNK1D-209ENST00000578904 CLDN1O95832 211 aa12.1□□□□□ -0.47
CSNK1D-209ENST00000578904 CCNOP22674 350 aa12.1□□□□□ -0.47
CSNK1D-209ENST00000578904 NR4A1P22736 598 aa12.1□□□□□ -0.47
CSNK1D-209ENST00000578904 APEX1P27695 318 aaKnown RBP12.1□□□□□ -0.47
CSNK1D-209ENST00000578904 SOX6P35712 828 aa12.1□□□□□ -0.47
CSNK1D-209ENST00000578904 KIR3DL2P43630 455 aa12.1□□□□□ -0.47
CSNK1D-209ENST00000578904 VBP1P61758 197 aa12.1□□□□□ -0.47
CSNK1D-209ENST00000578904 MFGE8Q08431 387 aaPredicted RBP12.1□□□□□ -0.47
CSNK1D-209ENST00000578904 MALLQ13021 153 aa12.1□□□□□ -0.47
CSNK1D-209ENST00000578904 KRTAP27-1Q3LI81 207 aa12.1□□□□□ -0.47
CSNK1D-209ENST00000578904 C22orf42Q6IC83 251 aa12.1□□□□□ -0.47
CSNK1D-209ENST00000578904 DOK3Q7L591 496 aa12.1□□□□□ -0.47
CSNK1D-209ENST00000578904 TPRA1Q86W33 373 aa12.1□□□□□ -0.47
CSNK1D-209ENST00000578904 SLC30A7Q8NEW0 376 aa12.1□□□□□ -0.47
CSNK1D-209ENST00000578904 FGFBP3Q8TAT2 258 aa12.1□□□□□ -0.47
CSNK1D-209ENST00000578904 AKAP1Q92667 903 aaKnown RBP eCLIP12.1□□□□□ -0.47
CSNK1D-209ENST00000578904 APOBEC3DQ96AK3 386 aaPredicted RBP12.1□□□□□ -0.47
CSNK1D-209ENST00000578904 S100PBPQ96BU1 408 aa12.1□□□□□ -0.47
CSNK1D-209ENST00000578904 NAA50Q9GZZ1 169 aaKnown RBP12.1□□□□□ -0.47
CSNK1D-209ENST00000578904 OPA3Q9H6K4 179 aa12.1□□□□□ -0.47
CSNK1D-209ENST00000578904 SLC24A3Q9HC58 644 aa12.1□□□□□ -0.47
CSNK1D-209ENST00000578904 NGBQ9NPG2 151 aa12.1□□□□□ -0.47
CSNK1D-209ENST00000578904 CKLFQ9UBR5 152 aa12.1□□□□□ -0.47
CSNK1D-209ENST00000578904 SLC22A13Q9Y226 551 aa12.1□□□□□ -0.47
CSNK1D-209ENST00000578904 PDCD5O14737 125 aa12.09□□□□□ -0.47
CSNK1D-209ENST00000578904 IL1AP01583 271 aa12.09□□□□□ -0.47
CSNK1D-209ENST00000578904 TTRP02766 147 aa12.09□□□□□ -0.47
CSNK1D-209ENST00000578904 TUBG1P23258 451 aa12.09□□□□□ -0.47
CSNK1D-209ENST00000578904 PEX19P40855 299 aa12.09□□□□□ -0.47
CSNK1D-209ENST00000578904 PSMD7P51665 324 aa12.09□□□□□ -0.47
CSNK1D-209ENST00000578904 SNTB1Q13884 538 aaKnown RBP12.09□□□□□ -0.47
CSNK1D-209ENST00000578904 DOC2BQ14184 412 aa12.09□□□□□ -0.47
CSNK1D-209ENST00000578904 PPA1Q15181 289 aa12.09□□□□□ -0.47
CSNK1D-209ENST00000578904 DGUOKQ16854 277 aa12.09□□□□□ -0.47
CSNK1D-209ENST00000578904 HSD17B12Q53GQ0 312 aa12.09□□□□□ -0.47
CSNK1D-209ENST00000578904 ZMAT1Q5H9K5 638 aa12.09□□□□□ -0.47
CSNK1D-209ENST00000578904 FOXB2Q5VYV0 432 aa12.09□□□□□ -0.47
CSNK1D-209ENST00000578904 UNQ9370/PRO34162Q6UXP9 181 aa12.09□□□□□ -0.47
CSNK1D-209ENST00000578904 CROCCP3Q8IVE0 287 aa12.09□□□□□ -0.47
CSNK1D-209ENST00000578904 CPEB3Q8NE35 698 aaKnown RBP12.09□□□□□ -0.47
CSNK1D-209ENST00000578904 OR8B12Q8NGG6 310 aa12.09□□□□□ -0.47
CSNK1D-209ENST00000578904 OR13C3Q8NGS6 347 aa12.09□□□□□ -0.47
CSNK1D-209ENST00000578904 RPL3LQ92901 407 aaKnown RBP12.09□□□□□ -0.47
CSNK1D-209ENST00000578904 RNF166Q96A37 237 aaPredicted RBP12.09□□□□□ -0.47
CSNK1D-209ENST00000578904 C10orf35Q96D05 121 aa12.09□□□□□ -0.47
CSNK1D-209ENST00000578904 KCNS3Q9BQ31 491 aa12.09□□□□□ -0.47
CSNK1D-209ENST00000578904 CENPOQ9BU64 300 aa12.09□□□□□ -0.47
CSNK1D-209ENST00000578904 DCSTAMPQ9H295 470 aa12.09□□□□□ -0.47
CSNK1D-209ENST00000578904 NEK6Q9HC98 313 aa12.09□□□□□ -0.47
CSNK1D-209ENST00000578904 TCF7L1Q9HCS4 588 aa12.09□□□□□ -0.47
CSNK1D-209ENST00000578904 TUBG2Q9NRH3 451 aa12.09□□□□□ -0.47
CSNK1D-209ENST00000578904 TRBV5-5A0A0J9YX44 114 aa12.08□□□□□ -0.48
CSNK1D-209ENST00000578904 LOC107986453A0A1B0GWG9 222 aa12.08□□□□□ -0.48
CSNK1D-209ENST00000578904 CASKO14936 926 aa12.08□□□□□ -0.48
CSNK1D-209ENST00000578904 SC5DO75845 299 aa12.08□□□□□ -0.48
CSNK1D-209ENST00000578904 ATE1O95260 518 aa12.08□□□□□ -0.48
CSNK1D-209ENST00000578904 IGKV3-15P01624 115 aa12.08□□□□□ -0.48
CSNK1D-209ENST00000578904 DBHP09172 617 aa12.08□□□□□ -0.48
CSNK1D-209ENST00000578904 ZNF14P17017 642 aaPredicted RBP12.08□□□□□ -0.48
CSNK1D-209ENST00000578904 MTNR1BP49286 362 aa12.08□□□□□ -0.48
CSNK1D-209ENST00000578904 IDH3GP51553 393 aaPredicted RBP12.08□□□□□ -0.48
CSNK1D-209ENST00000578904 NCS1P62166 190 aa12.08□□□□□ -0.48
CSNK1D-209ENST00000578904 ODF4Q2M2E3 257 aa12.08□□□□□ -0.48
CSNK1D-209ENST00000578904 CNPY1Q3B7I2 92 aa12.08□□□□□ -0.48
CSNK1D-209ENST00000578904 WDR31Q8NA23 367 aa12.08□□□□□ -0.48
CSNK1D-209ENST00000578904 POM121L2Q96KW2 1035 aa12.08□□□□□ -0.48
CSNK1D-209ENST00000578904 MED18Q9BUE0 208 aa12.08□□□□□ -0.48
CSNK1D-209ENST00000578904 C1QTNF5Q9BXJ0 243 aa12.08□□□□□ -0.48
CSNK1D-209ENST00000578904 PLEKHA1Q9HB21 404 aa12.08□□□□□ -0.48
CSNK1D-209ENST00000578904 TBCCD1Q9NVR7 557 aa12.08□□□□□ -0.48
CSNK1D-209ENST00000578904 PTTG2Q9NZH5 202 aa12.08□□□□□ -0.48
CSNK1D-209ENST00000578904 CRNNQ9UBG3 495 aaPredicted RBP12.08□□□□□ -0.48
CSNK1D-209ENST00000578904 NDRG3Q9UGV2 375 aa12.08□□□□□ -0.48
CSNK1D-209ENST00000578904 SPEF1Q9Y4P9 236 aa12.08□□□□□ -0.48
CSNK1D-209ENST00000578904 SLC25A15Q9Y619 301 aa12.08□□□□□ -0.48
CSNK1D-209ENST00000578904 COL12A1Q99715 3063 aa12.08□□□□□ -0.48
CSNK1D-209ENST00000578904 HCFC1P51610 2035 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms