RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 SHISA6Q6ZSJ9 500 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 ZFP62Q8NB50 900 aaPredicted RBP13.18□□□□□ -0.3
PTPN13-203ENST00000427191 FAM103A1Q9BTL3 118 aaKnown RBP13.18□□□□□ -0.3
PTPN13-203ENST00000427191 ZNF26P17031 533 aaPredicted RBP13.18□□□□□ -0.3
PTPN13-203ENST00000427191 OR51H1Q8NH63 302 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 MMP26Q9NRE1 261 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 CMC2Q9NRP2 79 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 CTSLP07711 333 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 GNB1P62873 340 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 PSENENQ9NZ42 101 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 TRAV1-2A0A0B4J238 106 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 NRASP01111 189 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 OR6C1Q96RD1 312 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 LINC01387J3KSC0 135 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 GPR31O00270 319 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 HS3ST1O14792 307 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 C1SP09871 688 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 GABRB1P18505 474 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 SDHBP21912 280 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 SAXO2Q658L1 398 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 DUSP13Q9UII6 198 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 MBLAC1A4D2B0 266 aaPredicted RBP13.18□□□□□ -0.3
PTPN13-203ENST00000427191 M0QZK8 103 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 GGCTO75223 188 aaKnown RBP13.18□□□□□ -0.3
PTPN13-203ENST00000427191 LINC00346Q8IVM7 164 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 HHIPQ96QV1 700 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 IFT22Q9H7X7 185 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 C4AP0C0L4 1744 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 C4BP0C0L5 1744 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 SLC10A3P09131 477 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 KRTDAPP60985 99 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 IGFBP7Q16270 282 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 TRMT12Q53H54 448 aaKnown RBP13.18□□□□□ -0.3
PTPN13-203ENST00000427191 SOWAHCQ53LP3 525 aaPredicted RBP13.18□□□□□ -0.3
PTPN13-203ENST00000427191 ARRDC1Q8N5I2 433 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 TM4SF18Q96CE8 201 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 H7C1C5 153 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 FZD6O60353 706 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 PTHLHP12272 177 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 CEBPBP17676 345 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 CEBPEQ15744 281 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 CHST6Q9GZX3 395 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 ANKRD61A6NGH8 418 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 SELENOFO60613 162 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 RGRP47804 291 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 CDKN3Q16667 212 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 GALMQ96C23 342 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 S1PR5Q9H228 398 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 LRP6O75581 1613 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 ZNF320A2RRD8 509 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 CLDN2P57739 230 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 HGDQ93099 445 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 MRPS24Q96EL2 167 aaKnown RBP13.17□□□□□ -0.3
PTPN13-203ENST00000427191 ATP5SQ99766 215 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 SPOCK3Q9BQ16 436 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 MENTQ9BUN1 341 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 ZNF816-ZNF321PA0A0X1KG74 233 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 GALP22466 123 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 DCAF16Q9NXF7 216 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 R4GMQ9 66 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 A0A1B0GUL6 1792 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 TNFRSF10CO14798 259 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 TMPRSS11FQ6ZWK6 438 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 C17orf78Q8N4C9 275 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 PLAC9Q5JTB6 97 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 PIGTQ969N2 578 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 RPUSD4Q96CM3 377 aaKnown RBP13.17□□□□□ -0.3
PTPN13-203ENST00000427191 CXorf36Q9H7Y0 433 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 SLC25A19Q9HC21 320 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 RAB27BO00194 218 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 AQP8O94778 261 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 G0S2P27469 103 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 MMP15P51511 669 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 SMAGPQ0VAQ4 97 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 B3GNTL1Q67FW5 361 aaPredicted RBP13.17□□□□□ -0.3
PTPN13-203ENST00000427191 LAIR1Q6GTX8 287 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 CYHR1Q6ZMK1 362 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 OR5M11Q96RB7 305 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 LAT2Q9GZY6 243 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 PARD6AQ9NPB6 346 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 PDLIM7Q9NR12 457 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 PRSS21Q9Y6M0 314 aa13.17□□□□□ -0.3
PTPN13-203ENST00000427191 PGA3P0DJD8 388 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 HOXD9P28356 352 aaPredicted RBP13.16□□□□□ -0.3
PTPN13-203ENST00000427191 OR2B8PP59922 312 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 DUSP8Q13202 625 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 LPAL2Q16609 132 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 CLLU1OSQ5K130 101 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 ZNF468Q5VIY5 522 aaPredicted RBP13.16□□□□□ -0.3
PTPN13-203ENST00000427191 CLEC9AQ6UXN8 241 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 TMEM123Q8N131 208 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 OR2M3Q8NG83 312 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 LRRC15Q8TF66 581 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 PHYHIPLQ96FC7 376 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 MAP6Q96JE9 813 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 TAS2R4Q9NYW5 299 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 CCDC187A0A096LP49 1063 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 ALOX12BO75342 701 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 GRPP07492 148 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 PGGT1BP53609 377 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms