RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 FLI1Q01543 452 aaPredicted RBP12.71□□□□□ -0.38
PCDH8-201ENST00000338862 MGAT2Q10469 447 aa12.71□□□□□ -0.38
PCDH8-201ENST00000338862 NAXDQ8IW45 347 aa12.71□□□□□ -0.38
PCDH8-201ENST00000338862 BAP18Q8IXM2 172 aa12.71□□□□□ -0.38
PCDH8-201ENST00000338862 OR2I1PQ8NGU4 316 aa12.71□□□□□ -0.38
PCDH8-201ENST00000338862 MRGPRX1Q96LB2 322 aa12.71□□□□□ -0.38
PCDH8-201ENST00000338862 NICN1Q9BSH3 213 aa12.71□□□□□ -0.38
PCDH8-201ENST00000338862 FOXQ1Q9C009 403 aa12.71□□□□□ -0.38
PCDH8-201ENST00000338862 ZNF700Q9H0M5 742 aa12.71□□□□□ -0.38
PCDH8-201ENST00000338862 RGCCQ9H4X1 137 aa12.71□□□□□ -0.38
PCDH8-201ENST00000338862 CNTD2Q9H8S5 307 aa12.71□□□□□ -0.38
PCDH8-201ENST00000338862 TRAV14DV4A0A0A6YYC5 116 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 DNASE2O00115 360 aaPredicted RBP12.7□□□□□ -0.38
PCDH8-201ENST00000338862 NME2P1O60361 137 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 ZNF93P35789 620 aaPredicted RBP12.7□□□□□ -0.38
PCDH8-201ENST00000338862 ZNF117Q03924 483 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 HNF4GQ14541 408 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 CHRFAM7AQ494W8 412 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 KLHDC7BQ96G42 594 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 AKR1E2Q96JD6 320 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 PDE7BQ9NP56 450 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 TMEM218A2RU14 115 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 PLRG1O43660 514 aaKnown RBP12.7□□□□□ -0.38
PCDH8-201ENST00000338862 SNAPINO95295 136 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 GNRH1P01148 92 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 RPA2P15927 270 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 BIDP55957 195 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 RPL27P61353 136 aaKnown RBP12.7□□□□□ -0.38
PCDH8-201ENST00000338862 LDLRAD3Q86YD5 345 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 LINC00518Q8N0U6 118 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 OR5M8Q8NGP6 311 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 SLAMF9Q96A28 289 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 SFXN1Q9H9B4 322 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 RASL12Q9NYN1 266 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 OR2F2O95006 317 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 OMGP23515 440 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 RAB5BP61020 215 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 OR2F1Q13607 317 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 ELAVL1Q15717 326 aaKnown RBP12.7□□□□□ -0.38
PCDH8-201ENST00000338862 LYG2Q86SG7 212 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 CDC20BQ86Y33 519 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 HSD17B11Q8NBQ5 300 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 OR5T2Q8NGG2 359 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 RNF141Q8WVD5 230 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 ASB5Q8WWX0 329 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 NUDT9Q9BW91 350 aa12.7□□□□□ -0.38
PCDH8-201ENST00000338862 ARPC4-TTLL3A0A0A6YYG9 625 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 AVPI1Q5T686 147 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 FAM57BQ71RH2 274 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 OR51F2Q8NH61 342 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 RAB3CQ96E17 227 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 EXOSC3Q9NQT5 275 aaKnown RBP12.69□□□□□ -0.38
PCDH8-201ENST00000338862 KIAA1671Q9BY89 1806 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 C9orf170A2RU37 121 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 CCDC85CA6NKD9 419 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 C1orf196B1AJZ1 125 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 SIGLEC6O43699 453 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 CRYBA1P05813 215 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 GP1BAP07359 652 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 RCC1P18754 421 aaPredicted RBP12.69□□□□□ -0.38
PCDH8-201ENST00000338862 CLRN1P58418 232 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 C1orf140Q5VVS0 124 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 ZNF440Q8IYI8 595 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 CDC6Q99741 560 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 TMPRSS13Q9BYE2 586 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 TUBAL3A6NHL2 446 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 MPTX1A8MV57 137 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 AQP8O94778 261 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 TSPAN15O95858 294 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 RPS4Y1P22090 263 aaKnown RBP12.69□□□□□ -0.38
PCDH8-201ENST00000338862 GLRA1P23415 457 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 MPGP29372 298 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 SP6Q3SY56 376 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 PDZD11Q5EBL8 140 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 SLC25A24Q6NUK1 477 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 BRICD5Q6PL45 260 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 FAM122BQ7Z309 247 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 USB1Q9BQ65 265 aaKnown RBP12.69□□□□□ -0.38
PCDH8-201ENST00000338862 FAM86C1Q9NVL1 165 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 HIF3AQ9Y2N7 669 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 URGCP-MRPS24S4R325 110 aa12.69□□□□□ -0.38
PCDH8-201ENST00000338862 ABCA7Q8IZY2 2146 aa12.68□□□□□ -0.38
PCDH8-201ENST00000338862 OR2T1O43869 369 aa12.68□□□□□ -0.38
PCDH8-201ENST00000338862 MST1P26927 711 aa12.68□□□□□ -0.38
PCDH8-201ENST00000338862 MEF2DQ14814 521 aa12.68□□□□□ -0.38
PCDH8-201ENST00000338862 PDCD1Q15116 288 aa12.68□□□□□ -0.38
PCDH8-201ENST00000338862 FAM69BQ5VUD6 431 aa12.68□□□□□ -0.38
PCDH8-201ENST00000338862 TFAP2EQ6VUC0 442 aa12.68□□□□□ -0.38
PCDH8-201ENST00000338862 P4HA3Q7Z4N8 544 aa12.68□□□□□ -0.38
PCDH8-201ENST00000338862 BHLHE23Q8NDY6 225 aa12.68□□□□□ -0.38
PCDH8-201ENST00000338862 CYYR1Q96J86 154 aa12.68□□□□□ -0.38
PCDH8-201ENST00000338862 ARL5BQ96KC2 179 aa12.68□□□□□ -0.38
PCDH8-201ENST00000338862 NECAB3Q96P71 396 aaPredicted RBP12.68□□□□□ -0.38
PCDH8-201ENST00000338862 KLF15Q9UIH9 416 aa12.68□□□□□ -0.38
PCDH8-201ENST00000338862 PUS1Q9Y606 427 aaKnown RBP eCLIP12.68□□□□□ -0.38
PCDH8-201ENST00000338862 A0A1W2PPC1 479 aa12.68□□□□□ -0.38
PCDH8-201ENST00000338862 MEGF11A6BM72 1044 aa12.68□□□□□ -0.38
PCDH8-201ENST00000338862 XRCC2O43543 280 aa12.68□□□□□ -0.38
PCDH8-201ENST00000338862 ZNF354AO60765 605 aaPredicted RBP12.68□□□□□ -0.38
PCDH8-201ENST00000338862 NSA2O95478 260 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms