RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 MTFR2Q6P444 385 aa24.37■■□□□ 1.49
CCM2-218ENST00000541586 FDX2Q6P4F2 183 aa24.37■■□□□ 1.49
CCM2-218ENST00000541586 SLIRPQ9GZT3 109 aaKnown RBP24.37■■□□□ 1.49
CCM2-218ENST00000541586 KCNN2Q9H2S1 579 aa24.37■■□□□ 1.49
CCM2-218ENST00000541586 GP6Q9HCN6 339 aa24.37■■□□□ 1.49
CCM2-218ENST00000541586 FBXL3Q9UKT7 428 aa24.37■■□□□ 1.49
CCM2-218ENST00000541586 TNFSF13O75888 250 aa24.36■■□□□ 1.49
CCM2-218ENST00000541586 KRT33AO76009 404 aa24.36■■□□□ 1.49
CCM2-218ENST00000541586 H2BFMP0C1H6 154 aa24.36■■□□□ 1.49
CCM2-218ENST00000541586 PAX7P23759 505 aa24.36■■□□□ 1.49
CCM2-218ENST00000541586 RPS11P62280 158 aaKnown RBP eCLIP24.36■■□□□ 1.49
CCM2-218ENST00000541586 PRSS35Q8N3Z0 413 aa24.36■■□□□ 1.49
CCM2-218ENST00000541586 LRRC18Q8N456 261 aa24.36■■□□□ 1.49
CCM2-218ENST00000541586 TMEM38BQ9NVV0 291 aa24.36■■□□□ 1.49
CCM2-218ENST00000541586 ZNF281Q9Y2X9 895 aa24.36■■□□□ 1.49
CCM2-218ENST00000541586 OR6C65A6NJZ3 312 aa24.35■■□□□ 1.49
CCM2-218ENST00000541586 RER1O15258 196 aa24.35■■□□□ 1.49
CCM2-218ENST00000541586 CLPXO76031 633 aa24.35■■□□□ 1.49
CCM2-218ENST00000541586 CDRT1O95170 752 aa24.35■■□□□ 1.49
CCM2-218ENST00000541586 PNPP00491 289 aa24.35■■□□□ 1.49
CCM2-218ENST00000541586 NPR2P20594 1047 aa24.35■■□□□ 1.49
CCM2-218ENST00000541586 ACSM3Q53FZ2 586 aa24.35■■□□□ 1.49
CCM2-218ENST00000541586 FAM27BQ5VT28 67 aa24.35■■□□□ 1.49
CCM2-218ENST00000541586 LIX1LQ8IVB5 337 aa24.35■■□□□ 1.49
CCM2-218ENST00000541586 APH1AQ96BI3 265 aa24.35■■□□□ 1.49
CCM2-218ENST00000541586 STARD4Q96DR4 205 aa24.35■■□□□ 1.49
CCM2-218ENST00000541586 C4orf45Q96LM5 186 aa24.35■■□□□ 1.49
CCM2-218ENST00000541586 SIAEQ9HAT2 523 aa24.35■■□□□ 1.49
CCM2-218ENST00000541586 CCDC59Q9P031 241 aaKnown RBP24.35■■□□□ 1.49
CCM2-218ENST00000541586 OR4C45A6NMZ5 311 aa24.35■■□□□ 1.49
CCM2-218ENST00000541586 SERPINA3P01011 423 aa24.35■■□□□ 1.49
CCM2-218ENST00000541586 CRHP06850 196 aa24.35■■□□□ 1.49
CCM2-218ENST00000541586 OPRM1P35372 400 aa24.35■■□□□ 1.49
CCM2-218ENST00000541586 MFGE8Q08431 387 aaPredicted RBP24.35■■□□□ 1.49
CCM2-218ENST00000541586 GUSBP1Q15486 140 aa24.35■■□□□ 1.49
CCM2-218ENST00000541586 CEACAM19Q7Z692 300 aa24.35■■□□□ 1.49
CCM2-218ENST00000541586 BTLAQ7Z6A9 289 aa24.35■■□□□ 1.49
CCM2-218ENST00000541586 HIST2H2ABQ8IUE6 130 aaPredicted RBP24.35■■□□□ 1.49
CCM2-218ENST00000541586 OR5AK2Q8NH90 309 aa24.35■■□□□ 1.49
CCM2-218ENST00000541586 FOXB1Q99853 325 aa24.35■■□□□ 1.49
CCM2-218ENST00000541586 SFXN3Q9BWM7 321 aa24.35■■□□□ 1.49
CCM2-218ENST00000541586 ZNF629Q9UEG4 869 aaPredicted RBP24.35■■□□□ 1.49
CCM2-218ENST00000541586 INTS1Q8N201 2190 aaKnown RBP24.35■■□□□ 1.49
CCM2-218ENST00000541586 SRSF10O75494 262 aaKnown RBP24.34■■□□□ 1.49
CCM2-218ENST00000541586 SDC2P34741 201 aa24.34■■□□□ 1.49
CCM2-218ENST00000541586 KIR3DL2P43630 455 aa24.34■■□□□ 1.49
CCM2-218ENST00000541586 WDR38Q5JTN6 314 aa24.34■■□□□ 1.49
CCM2-218ENST00000541586 TBC1D15Q8TC07 691 aa24.34■■□□□ 1.49
CCM2-218ENST00000541586 RGP1Q92546 391 aaPredicted RBP24.34■■□□□ 1.49
CCM2-218ENST00000541586 PPIL3Q9H2H8 161 aaKnown RBP24.34■■□□□ 1.49
CCM2-218ENST00000541586 PNRC2Q9NPJ4 139 aaKnown RBP24.34■■□□□ 1.49
CCM2-218ENST00000541586 SNTG1Q9NSN8 517 aa24.34■■□□□ 1.49
CCM2-218ENST00000541586 R4GMQ9 66 aa24.34■■□□□ 1.49
CCM2-218ENST00000541586 ZNF878C9JN71 531 aa24.33■■□□□ 1.49
CCM2-218ENST00000541586 AGFG2O95081 481 aa24.33■■□□□ 1.49
CCM2-218ENST00000541586 IL1AP01583 271 aa24.33■■□□□ 1.49
CCM2-218ENST00000541586 B4GALT1P15291 398 aa24.33■■□□□ 1.49
CCM2-218ENST00000541586 CCR9P51686 369 aa24.33■■□□□ 1.49
CCM2-218ENST00000541586 MXD1Q05195 221 aa24.33■■□□□ 1.49
CCM2-218ENST00000541586 YIF1BQ5BJH7 314 aa24.33■■□□□ 1.49
CCM2-218ENST00000541586 RHOUQ7L0Q8 258 aa24.33■■□□□ 1.49
CCM2-218ENST00000541586 MRGPRGQ86SM5 289 aa24.33■■□□□ 1.49
CCM2-218ENST00000541586 ZNF100Q8IYN0 542 aa24.33■■□□□ 1.49
CCM2-218ENST00000541586 DACH2Q96NX9 599 aa24.33■■□□□ 1.49
CCM2-218ENST00000541586 MED18Q9BUE0 208 aa24.33■■□□□ 1.49
CCM2-218ENST00000541586 TMEM212A6NML5 194 aa24.32■■□□□ 1.48
CCM2-218ENST00000541586 RPL36A-HNRNPH2H7BZ11 118 aa24.32■■□□□ 1.48
CCM2-218ENST00000541586 CLEC2LP0C7M8 214 aa24.32■■□□□ 1.48
CCM2-218ENST00000541586 FAM27D1Q5T7N8 215 aa24.32■■□□□ 1.48
CCM2-218ENST00000541586 LUZP2Q86TE4 346 aa24.32■■□□□ 1.48
CCM2-218ENST00000541586 CATSPERDQ86XM0 798 aa24.32■■□□□ 1.48
CCM2-218ENST00000541586 OR6K3Q8NGY3 331 aa24.32■■□□□ 1.48
CCM2-218ENST00000541586 CA5BP1Q8WTZ4 195 aa24.32■■□□□ 1.48
CCM2-218ENST00000541586 SH3GL3Q99963 347 aa24.32■■□□□ 1.48
CCM2-218ENST00000541586 GTF2A1LQ9UNN4 478 aa24.32■■□□□ 1.48
CCM2-218ENST00000541586 PROCRQ9UNN8 238 aa24.32■■□□□ 1.48
CCM2-218ENST00000541586 SHISA3A0PJX4 238 aa24.32■■□□□ 1.48
CCM2-218ENST00000541586 EEF1E1-BLOC1S5C9J1V9 151 aa24.32■■□□□ 1.48
CCM2-218ENST00000541586 EEF1E1O43324 174 aaKnown RBP24.32■■□□□ 1.48
CCM2-218ENST00000541586 CHRNB4P30926 498 aa24.32■■□□□ 1.48
CCM2-218ENST00000541586 ZMAT1Q5H9K5 638 aa24.32■■□□□ 1.48
CCM2-218ENST00000541586 ZNF676Q8N7Q3 588 aa24.32■■□□□ 1.48
CCM2-218ENST00000541586 GJC3Q8NFK1 279 aa24.32■■□□□ 1.48
CCM2-218ENST00000541586 IL17RDQ8NFM7 739 aa24.32■■□□□ 1.48
CCM2-218ENST00000541586 FBXO17Q96EF6 278 aa24.32■■□□□ 1.48
CCM2-218ENST00000541586 OPN3Q9H1Y3 402 aaPredicted RBP24.32■■□□□ 1.48
CCM2-218ENST00000541586 TPK1Q9H3S4 243 aa24.32■■□□□ 1.48
CCM2-218ENST00000541586 SLC22A13Q9Y226 551 aa24.32■■□□□ 1.48
CCM2-218ENST00000541586 ZNF587BE7ETH6 402 aa24.31■■□□□ 1.48
CCM2-218ENST00000541586 CALRP27797 417 aaKnown RBP24.31■■□□□ 1.48
CCM2-218ENST00000541586 DCTDP32321 178 aa24.31■■□□□ 1.48
CCM2-218ENST00000541586 SOX6P35712 828 aa24.31■■□□□ 1.48
CCM2-218ENST00000541586 HIST1H3AP68431 136 aa24.31■■□□□ 1.48
CCM2-218ENST00000541586 HIST2H3PS2Q5TEC6 136 aa24.31■■□□□ 1.48
CCM2-218ENST00000541586 ZNF544Q6NX49 715 aa24.31■■□□□ 1.48
CCM2-218ENST00000541586 HIST2H3AQ71DI3 136 aa24.31■■□□□ 1.48
CCM2-218ENST00000541586 SLC22A24Q8N4F4 322 aa24.31■■□□□ 1.48
CCM2-218ENST00000541586 PPP1R14AQ96A00 147 aa24.31■■□□□ 1.48
CCM2-218ENST00000541586 OR14A2Q96R54 314 aa24.31■■□□□ 1.48
CCM2-218ENST00000541586 COMMD4Q9H0A8 199 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms