RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 SPNP16150 400 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 RAB3BP20337 219 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 FKBP2P26885 142 aaKnown RBP8.2□□□□□ -1.1
ATG4A-202ENST00000345734 CD96P40200 585 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 NR4A2P43354 598 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 KIR3DL2P43630 455 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 B3GALT5-AS1P59052 145 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 HSD17B12Q53GQ0 312 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 YIF1BQ5BJH7 314 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 DCAF10Q5QP82 559 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 DNM1P34Q6PK57 102 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 TPRA1Q86W33 373 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 SPACA3Q8IXA5 215 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 OR5AK2Q8NH90 309 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 TTYH2Q9BSA4 534 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 ABHD6Q9BV23 337 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 CCDC32Q9BV29 185 aa8.2□□□□□ -1.1
ATG4A-202ENST00000345734 LAMA5O15230 3695 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 PTPRBP23467 1997 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 A0A0J9YW62 118 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 ANKRD61A6NGH8 418 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 H3BUI4 141 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 TNFSF11O14788 317 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 ARL6IP5O75915 188 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 PMS2P2O95744 297 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 PNPP00491 289 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 ZNF823P16415 610 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 ZNF17P17021 662 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 ZNF43P17038 809 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 ATF1P18846 271 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 ELK1P19419 428 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 ITGA3P26006 1051 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 SOX2P48431 317 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 CLRN1P58418 232 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 H3F3AP84243 136 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 RIPPLY1Q0D2K3 151 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 MFAP5Q13361 173 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 P2RY14Q15391 338 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 TGIF1Q15583 401 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 ZNF239Q16600 458 aaKnown RBP8.19□□□□□ -1.1
ATG4A-202ENST00000345734 WDR38Q5JTN6 314 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 ATP1A1-AS1Q5TC04 95 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 MZT2AQ6P582 158 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 ZNF679Q8IYX0 411 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 CISD2Q8N5K1 135 aaKnown RBP8.19□□□□□ -1.1
ATG4A-202ENST00000345734 DTX3Q8N9I9 347 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 NOXO1Q8NFA2 376 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 OR51A4Q8NGJ6 313 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 OR10AC1Q8NH08 325 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 ASB17Q8WXJ9 295 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 C11orf40Q8WZ69 217 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 HTRA1Q92743 480 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 C4orf45Q96LM5 186 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 SIGLEC12Q96PQ1 595 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 DERL3Q96Q80 235 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 GFI1Q99684 422 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 SOSTQ9BQB4 213 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 PIGQQ9BRB3 760 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 HES7Q9BYE0 225 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 LRFN1Q9P244 771 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 SLC22A13Q9Y226 551 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 ZNF407Q9C0G0 2248 aa8.19□□□□□ -1.1
ATG4A-202ENST00000345734 URB1O60287 2271 aaKnown RBP8.19□□□□□ -1.1
ATG4A-202ENST00000345734 TRAV6A0A075B6T7 132 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 SSX4O60224 188 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 TRAPPC6AO75865 159 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 NEURL1O76050 574 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 IGHG1P01857 330 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 SRMP19623 302 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 POU3F2P20265 443 aaPredicted RBP8.18□□□□□ -1.1
ATG4A-202ENST00000345734 APEX1P27695 318 aaKnown RBP8.18□□□□□ -1.1
ATG4A-202ENST00000345734 SRD5A2P31213 254 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 EVX1P49640 407 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 CLDN20P56880 219 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 ROM1Q03395 351 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 RELQ04864 619 aaPredicted RBP8.18□□□□□ -1.1
ATG4A-202ENST00000345734 MFGE8Q08431 387 aaPredicted RBP8.18□□□□□ -1.1
ATG4A-202ENST00000345734 ESCO2Q56NI9 601 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 PYDC2Q56P42 97 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 OR7E24Q6IFN5 339 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 JMJD6Q6NYC1 403 aaPredicted RBP8.18□□□□□ -1.1
ATG4A-202ENST00000345734 XKRXQ6PP77 449 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 TRILQ7L0X0 811 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 DCXRQ7Z4W1 244 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 CDH26Q8IXH8 852 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 OR52N5Q8NH56 324 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 OR6X1Q8NH79 312 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 OR14L1PQ8NHC6 308 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 RNF128Q8TEB7 428 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 ADAMTS14Q8WXS8 1223 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 ACOT12Q8WYK0 555 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 SLC25A44Q96H78 314 aaPredicted RBP8.18□□□□□ -1.1
ATG4A-202ENST00000345734 RBP7Q96R05 134 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 SRXN1Q9BYN0 137 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 NARFLQ9H6Q4 476 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 PLA2G3Q9NZ20 509 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 ZNF221Q9UK13 617 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 FBXL3Q9UKT7 428 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 TBC1D24Q9ULP9 559 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 GTF2A1LQ9UNN4 478 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms