RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 SHISA3A0PJX4 238 aa14.99□□□□□ -0.01
TPM1-205ENST00000357980 TMEM212A6NML5 194 aa14.99□□□□□ -0.01
TPM1-205ENST00000357980 ZNF587BE7ETH6 402 aa14.99□□□□□ -0.01
TPM1-205ENST00000357980 CLPXO76031 633 aa14.99□□□□□ -0.01
TPM1-205ENST00000357980 SERPINA3P01011 423 aa14.99□□□□□ -0.01
TPM1-205ENST00000357980 IL1AP01583 271 aa14.99□□□□□ -0.01
TPM1-205ENST00000357980 CST2P09228 141 aa14.99□□□□□ -0.01
TPM1-205ENST00000357980 SDC2P34741 201 aa14.99□□□□□ -0.01
TPM1-205ENST00000357980 TDGF1P3P51864 188 aa14.99□□□□□ -0.01
TPM1-205ENST00000357980 ACSM3Q53FZ2 586 aa14.99□□□□□ -0.01
TPM1-205ENST00000357980 NSUN5P2Q63ZY6 315 aa14.99□□□□□ -0.01
TPM1-205ENST00000357980 ZNF627Q7L945 461 aa14.99□□□□□ -0.01
TPM1-205ENST00000357980 CATSPERDQ86XM0 798 aa14.99□□□□□ -0.01
TPM1-205ENST00000357980 ZNF100Q8IYN0 542 aa14.99□□□□□ -0.01
TPM1-205ENST00000357980 SLC22A24Q8N4F4 322 aa14.99□□□□□ -0.01
TPM1-205ENST00000357980 GJC3Q8NFK1 279 aa14.99□□□□□ -0.01
TPM1-205ENST00000357980 OR5AK2Q8NH90 309 aa14.99□□□□□ -0.01
TPM1-205ENST00000357980 CXorf56Q9H5V9 222 aa14.99□□□□□ -0.01
TPM1-205ENST00000357980 MALT1Q9UDY8 824 aa14.99□□□□□ -0.01
TPM1-205ENST00000357980 MAP1BP46821 2468 aaKnown RBP14.98□□□□□ -0.01
TPM1-205ENST00000357980 OR3A2P47893 321 aa14.98□□□□□ -0.01
TPM1-205ENST00000357980 MMP16P51512 607 aa14.98□□□□□ -0.01
TPM1-205ENST00000357980 ZMAT1Q5H9K5 638 aa14.98□□□□□ -0.01
TPM1-205ENST00000357980 FAM27D1Q5T7N8 215 aa14.98□□□□□ -0.01
TPM1-205ENST00000357980 UNQ9370/PRO34162Q6UXP9 181 aa14.98□□□□□ -0.01
TPM1-205ENST00000357980 CEACAM19Q7Z692 300 aa14.98□□□□□ -0.01
TPM1-205ENST00000357980 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.98□□□□□ -0.01
TPM1-205ENST00000357980 C9orf106Q8NAJ2 232 aa14.98□□□□□ -0.01
TPM1-205ENST00000357980 SH3GL3Q99963 347 aa14.98□□□□□ -0.01
TPM1-205ENST00000357980 C12orf49Q9H741 205 aa14.98□□□□□ -0.01
TPM1-205ENST00000357980 G6PC2Q9NQR9 355 aa14.98□□□□□ -0.01
TPM1-205ENST00000357980 FAM206AQ9NX38 181 aa14.98□□□□□ -0.01
TPM1-205ENST00000357980 EMC9Q9Y3B6 208 aa14.98□□□□□ -0.01
TPM1-205ENST00000357980 CDRT1O95170 752 aa14.97□□□□□ -0.01
TPM1-205ENST00000357980 FOXG1P55316 489 aaPredicted RBP14.97□□□□□ -0.01
TPM1-205ENST00000357980 ZNF829Q3KNS6 432 aaPredicted RBP14.97□□□□□ -0.01
TPM1-205ENST00000357980 ZNF585AQ6P3V2 769 aa14.97□□□□□ -0.01
TPM1-205ENST00000357980 FAM214BQ7L5A3 538 aa14.97□□□□□ -0.01
TPM1-205ENST00000357980 GCNT2Q8N0V5 402 aa14.97□□□□□ -0.01
TPM1-205ENST00000357980 CISD2Q8N5K1 135 aaKnown RBP14.97□□□□□ -0.01
TPM1-205ENST00000357980 TBC1D15Q8TC07 691 aa14.97□□□□□ -0.01
TPM1-205ENST00000357980 OR14A2Q96R54 314 aa14.97□□□□□ -0.01
TPM1-205ENST00000357980 BARHL1Q9BZE3 327 aa14.97□□□□□ -0.01
TPM1-205ENST00000357980 NIPAL2Q9H841 368 aa14.97□□□□□ -0.01
TPM1-205ENST00000357980 UPB1Q9UBR1 384 aa14.97□□□□□ -0.01
TPM1-205ENST00000357980 PRSS50Q9UI38 385 aa14.97□□□□□ -0.01
TPM1-205ENST00000357980 SLC22A13Q9Y226 551 aa14.97□□□□□ -0.01
TPM1-205ENST00000357980 TMEM269A0A1B0GVZ9 245 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 LOC110117498-PIK3R3F6TDL0 507 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 GATBO75879 557 aaKnown RBP14.96□□□□□ -0.01
TPM1-205ENST00000357980 CALRP27797 417 aaKnown RBP14.96□□□□□ -0.01
TPM1-205ENST00000357980 PSMA6P60900 246 aaKnown RBP14.96□□□□□ -0.01
TPM1-205ENST00000357980 ARF1P84077 181 aaKnown RBP14.96□□□□□ -0.01
TPM1-205ENST00000357980 CCDC92Q53HC0 331 aaPredicted RBP14.96□□□□□ -0.01
TPM1-205ENST00000357980 KLHL24Q6TFL4 600 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 ZNF813Q6ZN06 617 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 ZNF676Q8N7Q3 588 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 TEX19Q8NA77 164 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 PPP1R14AQ96A00 147 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 SLC25A46Q96AG3 418 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 SLX1AQ9BQ83 275 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 NXF2Q9GZY0 626 aaKnown RBP14.96□□□□□ -0.01
TPM1-205ENST00000357980 COMMD4Q9H0A8 199 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 SNTG1Q9NSN8 517 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 TRBV5-5A0A0J9YX44 114 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 MBD3L4A6NDZ8 208 aaPredicted RBP14.96□□□□□ -0.01
TPM1-205ENST00000357980 MBD3L3A6NE82 208 aaPredicted RBP14.96□□□□□ -0.01
TPM1-205ENST00000357980 MBD3L5A6NJ08 208 aaPredicted RBP14.96□□□□□ -0.01
TPM1-205ENST00000357980 WDR1O75083 606 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 UCHL1P09936 223 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 CLEC2LP0C7M8 214 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 GABRA1P14867 456 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 PAX7P23759 505 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 CTSSP25774 331 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 GRB2P62993 217 aaKnown RBP14.96□□□□□ -0.01
TPM1-205ENST00000357980 MXD1Q05195 221 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 FAPQ12884 760 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 FBXW9Q5XUX1 488 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 RTL6Q6ICC9 239 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 ZNF544Q6NX49 715 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 PAMR1Q6UXH9 720 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 SEM1Q6ZVN7 128 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 SYT9Q86SS6 491 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 SKA3Q8IX90 412 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 RDH10Q8IZV5 341 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 UBE2J2Q8N2K1 259 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 MBD3L2Q8NHZ7 208 aaPredicted RBP14.96□□□□□ -0.01
TPM1-205ENST00000357980 ATF6BQ99941 703 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 OR52A1Q9UKL2 312 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 SLC5A6Q9Y289 635 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 A3GALT2U3KPV4 340 aa14.96□□□□□ -0.01
TPM1-205ENST00000357980 ZNF879B4DU55 563 aa14.95□□□□□ -0.02
TPM1-205ENST00000357980 KIR2DL2P43627 348 aaPredicted RBP14.95□□□□□ -0.02
TPM1-205ENST00000357980 MTNR1BP49286 362 aa14.95□□□□□ -0.02
TPM1-205ENST00000357980 SF3B4Q15427 424 aaKnown RBP eCLIP14.95□□□□□ -0.021e-9■■□□□ 12.9
TPM1-205ENST00000357980 ZNF404Q494X3 552 aa14.95□□□□□ -0.02
TPM1-205ENST00000357980 ELFN2Q5R3F8 820 aa14.95□□□□□ -0.02
TPM1-205ENST00000357980 OR2A2Q6IF42 318 aa14.95□□□□□ -0.02
TPM1-205ENST00000357980 TFAP2EQ6VUC0 442 aa14.95□□□□□ -0.02
TPM1-205ENST00000357980 CD163Q86VB7 1156 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms